sucC:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

sucC

Gene Synonym(s)

ECK0716, b0728, JW0717[1], JW0717

Product Desc.

succinyl-CoA synthetase, β subunit[2][3];

Component of succinyl-CoA synthetase[2][3]

Succinyl CoA synthase beta-subunit; acid-inducible[4]

Product Synonyms(s)

succinyl-CoA synthetase, beta subunit[1], B0728[2][1], SucC[2][1], β subunit[2][1] , ECK0716, JW0717, b0728

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sdhCDAB-sucABCD[2], OP00142, sdhCDAB, sucABCD[2], OP00143, suc

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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sucCD is a synthetic lethal with sucAB. Binds TrxA (Kumar, 2004). HT_Cmplx6_Cyt: SucC+SucD.[4]



Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

sucC

Mnemonic

Succinate

Synonyms

ECK0716, b0728, JW0717[1], JW0717

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

16.43 minutes 

MG1655: 762237..763403
<gbrowseImage> name=NC_000913:762237..763403 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 743896..745062
<gbrowseImage> name=NC_012967:743896..745062 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 664997..666163
<gbrowseImage> name=NC_012759:664997..666163 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 763436..764602
<gbrowseImage> name=NC_007779:763436..764602 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 814829..815995
<gbrowseImage> name=NC_010473:814829..815995 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

Coding Start (SO:0000323)

MG1655

762237

Edman degradation

PMID:9298646


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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

ΔsucC (Keio:JW0717)

deletion

deletion

PMID:16738554

Shigen
CGSC8788[5]

sucC::Tn5KAN-2 (FB20224)

Insertion at nt 739 in Minus orientation

PMID:15262929

E. coli Genome Project:FB20224

does not contain pKD46

ΔsucC::kan

deletion

Biolog:respiration

unable to respire Acetate

PMID:16095938

ΔsucC::kan

deletion

Biolog:respiration

unable to respire a-Ketoglutarate

PMID:16095938

ΔsucC::kan

deletion

Biolog:respiration

unable to respire Bromosuccinate

PMID:16095938

ΔsucC::kan

deletion

Biolog:respiration

unable to respire Glucuronamide

PMID:16095938

ΔsucC::kan

deletion

Biolog:respiration

unable to respire L-Asparagine

PMID:16095938

ΔsucC::kan

deletion

Biolog:respiration

unable to respire L-Aspartate

PMID:16095938

ΔsucC::kan

deletion

Biolog:respiration

unable to respire L-Serine

PMID:16095938

ΔsucC777::kan

PMID:16738554

CGSC:103054


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Notes

Genetic Interactions

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<protect>

Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW0717

Plasmid clone

Shigen

PMID:16769691

Status:Clone OK

Primer 1:GCCAACTTACATGAATATCAGGC

Primer 2:CCTTTCCCCTCCACTGCGGCAAC

7E10

Kohara Phage

Genobase

PMID:3038334

18F11

Kohara Phage

Genobase

PMID:3038334

asnB3057::Tn10

Linked marker

CAG18433 = CGSC7349[5]

est. P1 cotransduction: 4% [6]
Synonyms:zbf-3057::Tn10 nnnThe Tn10 in CAG18433 is inserted in the asnB regulatory region, 4 bp before the start of the asnB ORF.

nadA57::Tn10

Linked marker

CAG12147 = CGSC7351[5]

est. P1 cotransduction: 54% [6]

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10981

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10981

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000970

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:945312

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0974

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002483

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

SucC

Synonyms

succinyl-CoA synthetase, beta subunit[1], B0728[2][1], SucC[2][1], β subunit[2][1] , ECK0716, JW0717, b0728

Product description

succinyl-CoA synthetase, β subunit[2][3];

Component of succinyl-CoA synthetase[2][3]

Succinyl CoA synthase beta-subunit; acid-inducible[4]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

GO:0000166

nucleotide binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

Seeded from EcoCyc (v14.0)

complete

GO:0000287

magnesium ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0460

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR005809

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR005811

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011761

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013816

F

Seeded from EcoCyc (v14.0)

complete

GO:0004775

succinate-CoA ligase (ADP-forming) activity

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00558

F

Seeded from EcoCyc (v14.0)

complete

GO:0004775

succinate-CoA ligase (ADP-forming) activity

GOA:spec
GO_REF:0000003

IEA: Inferred from Electronic Annotation

EC:6.2.1.5

F

Seeded from EcoCyc (v14.0)

complete

GO:0005524

ATP binding

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00558

F

Seeded from EcoCyc (v14.0)

complete

GO:0005524

ATP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011761

F

Seeded from EcoCyc (v14.0)

complete

GO:0005524

ATP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013816

F

Seeded from EcoCyc (v14.0)

complete

GO:0005524

ATP binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0067

F

Seeded from EcoCyc (v14.0)

complete

GO:0006099

tricarboxylic acid cycle

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00558

P

Seeded from EcoCyc (v14.0)

complete

GO:0006099

tricarboxylic acid cycle

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0816

P

Seeded from EcoCyc (v14.0)

complete

GO:0016874

ligase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0436

F

Seeded from EcoCyc (v14.0)

complete

GO:0030145

manganese ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0464

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc (v14.0)

complete

GO:0004775

succinate-CoA ligase (ADP-forming) activity

PMID:3543212

IMP: Inferred from Mutant Phenotype

F

complete

GO:0006099

tricarboxylic acid cycle

PMID:3543212

IMP: Inferred from Mutant Phenotype

P

complete

GO:0005575

cellular component

127.0.0.1 14:29, 17 February 2015 (CST)

ND: No biological Data available

C

Missing: reference

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of succinyl-CoA synthetase

could be indirect

Protein

sucB

PMID:16606699

Experiment(s):EBI-1137818

Protein

sucD

PMID:16606699

Experiment(s):EBI-1137818

Protein

zwf

PMID:16606699

Experiment(s):EBI-1137818

Protein

sdhA

PMID:16606699

Experiment(s):EBI-1137818

Protein

prs

PMID:16606699

Experiment(s):EBI-1137818

Protein

rsuA

PMID:16606699

Experiment(s):EBI-1137818

Protein

umuC

PMID:16606699

Experiment(s):EBI-1137818

Protein

rplI

PMID:19402753

LCMS(ID Probability):99.6

Protein

rpsR

PMID:19402753

LCMS(ID Probability):99.6

Protein

rpsS

PMID:19402753

LCMS(ID Probability):99.6

Protein

ahpC

PMID:19402753

LCMS(ID Probability):99.6

Protein

gadB

PMID:19402753

LCMS(ID Probability):99.6

Protein

yfiD

PMID:19402753

LCMS(ID Probability):99.6

Protein

recA

PMID:19402753

LCMS(ID Probability):99.6

Protein

rpsA

PMID:19402753

LCMS(ID Probability):99.6

Protein

dps

PMID:19402753

LCMS(ID Probability):99.6

Protein

infB

PMID:19402753

LCMS(ID Probability):99.6

Protein

miaB

PMID:19402753

LCMS(ID Probability):99.6

Protein

eno

PMID:19402753

LCMS(ID Probability):99.6

Protein

clpB

PMID:19402753

LCMS(ID Probability):99.6

Protein

pflB

PMID:19402753

LCMS(ID Probability):99.6

Protein

rpsJ

PMID:19402753

LCMS(ID Probability):99.6

Protein

dnaJ

PMID:19402753

LCMS(ID Probability):99.6

Protein

metE

PMID:19402753

LCMS(ID Probability):98.8

Protein

ibpA

PMID:19402753

LCMS(ID Probability):99.5

Protein

frsA

PMID:19402753

LCMS(ID Probability):99.5

Protein

yaiL

PMID:19402753

LCMS(ID Probability):99.6

Protein

sucD

PMID:19402753

LCMS(ID Probability):99.6

Protein

asnA

PMID:19402753

LCMS(ID Probability):99.6

Protein

upp

PMID:19402753

LCMS(ID Probability):99.6

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MNLHEYQAKQ LFARYGLPAP VGYACTTPRE AEEAASKIGA GPWVVKCQVH AGGRGKAGGV
KVVNSKEDIR AFAENWLGKR LVTYQTDANG QPVNQILVEA ATDIAKELYL GAVVDRSSRR
VVFMASTEGG VEIEKVAEET PHLIHKVALD PLTGPMPYQG RELAFKLGLE GKLVQQFTKI
FMGLATIFLE RDLALIEINP LVITKQGDLI CLDGKLGADG NALFRQPDLR EMRDQSQEDP
REAQAAQWEL NYVALDGNIG CMVNGAGLAM GTMDIVKLHG GEPANFLDVG GGATKERVTE
AFKIILSDDK VKAVLVNIFG GIVRCDLIAD GIIGAVAEVG VNVPVVVRLE GNNAELGAKK
LADSGLNIIA AKGLTDAAQQ VVAAVEGK
Length

388

Mol. Wt

41.392 kDa

pI

5.3 (calculated)

Extinction coefficient

26,930 - 27,555 (calc based on 7 Y, 3 W, and 5 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

262..382

PF00549 CoA-ligase

PMID:19920124

Domain

2..203

PF08442 ATP-grasp domain

PMID:19920124

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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=sucC taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128703

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945312

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002483

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0A836

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10981

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10981

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945312

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000970

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0974

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MC4100

1.11E+03

molecules/cell

  • Medium: median data from rich and minimal media
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min):
  • Growth phase: other:

emPAI

PMID:18304323

Protein

E. coli K-12 EMG2

340

molecules/cell

  • Medium: MOPS glucose minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • Growth phase: Exponential
  • OD: OD600 = 0.2 to 0.25
  • other: aerated

Quantitative protein sequencing

Spot ID: M63-l

PMID: 9298646

Protein

E. coli K-12 MG1655

5335

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

6381

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

3031

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

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Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

sdhCDAB-sucABCD

sucABCD

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Figure courtesy of RegulonDB

</protect>

Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:762217..762257 source=MG1655 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

</protect>

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b0728 (EcoliWiki Page)

NCBI GEO profiles for sucC

microarray

GenExpDB:b0728 (EcoliWiki Page)

Summary of data for sucC from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to sucC Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10981

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0974

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0728

EcoGene

EcoGene:EG10981

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000970

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002483

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000017707 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000006977 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G20420 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000008894 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000012551 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00023843 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00016844 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000006646 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000009920 (score: 0.137)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000015521 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000015051 (score: 0.087)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-1963 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-2910 (score: 1.000; bootstrap: 100%)
  • ZDB-EST-050302-115 (score: 0.130)
  • ZDB-GENE-030114-3 (score: 0.130)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231357 (score: 1.000; bootstrap: 100%)
  • DDB0231358 (score: 0.186)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0029118 (score: 1.000; bootstrap: 100%)
  • FBgn0037643 (score: 0.125)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA10444-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000027401 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000012380 (score: 0.135)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000258645 (score: 1.000; bootstrap: 100%)
  • ENSP00000307432 (score: 0.122)
  • ENSP00000343752 (score: 0.059)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000019551 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000014058 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000004026 (score: 0.143)

From Inparanoid:20070104

Mus musculus

  • MGI:1306775 (score: 1.000; bootstrap: 100%)
  • MGI:1306824 (score: 0.147)

From Inparanoid:20070104

Oryza gramene

  • Q6K9N6 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000026050 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000023516 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000007552 (score: 0.118)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YGR244C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC16208 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000132569 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000131566 (score: 0.103)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00021008001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000011207 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Shigella flexneri

SUCC

From SHIGELLACYC

E. coli O157

SUCC

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00549 CoA-ligase

Superfamily (EcoliWiki Page)

SUPERFAMILY:52210

Panther (EcoliWiki Page)

PTHR11815:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:56059

Pfam (EcoliWiki Page)

PF08442 ATP-grasp domain

EcoCyc

EcoCyc:EG10981

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10981

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000970

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0974

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002483

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 4.2 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 CGSC: The Coli Genetics Stock Center
  6. ↑ 6.0 6.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

Categories

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