nuoI:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

nuoI

Gene Synonym(s)

ECK2275, b2281, JW2276[1], JW2276

Product Desc.

NuoI[2][3];

Component of connecting fragment of NADH dehydrogenase I[3]; NADH dehydrogenase I[2][3]

NADH:ubiquinone oxidoreductase subunit I, complex I; NADH dehydrogenase I[4]

Product Synonyms(s)

NADH:ubiquinone oxidoreductase, chain I[1], B2281[2][1], NuoI[2][1] , ECK2275, JW2276, b2281

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): nuoABCEFGHIJKLMN[2], nuo1-14

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

nuoI

Mnemonic

NADH:ubiquinone oxidoreductase

Synonyms

ECK2275, b2281, JW2276[1], JW2276

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

51.6 minutes 

MG1655: 2394472..2393930
<gbrowseImage> name=NC_000913:2393930..2394472 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2340041..2339499
<gbrowseImage> name=NC_012967:2339499..2340041 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 2279735..2280277
<gbrowseImage> name=NC_012759:2279735..2280277 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 2401120..2400578
<gbrowseImage> name=NC_007779:2400578..2401120 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 2486237..2485695
<gbrowseImage> name=NC_010473:2485695..2486237 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

Coding Start (SO:0000323)

MG1655

2393930

Edman degradation

PMID:9298646
PMID:11416161


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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

ΔnuoI (Keio:JW2276)

deletion

deletion

PMID:16738554

Shigen
CGSC9834[5]

nuoI::Tn5KAN-2 (FB20738)

Insertion at nt 226 in Minus orientation

PMID:15262929

E. coli Genome Project:FB20738

contains pKD46

nuoI::Tn5KAN-2 (FB20739)

Insertion at nt 226 in Minus orientation

PMID:15262929

E. coli Genome Project:FB20739

does not contain pKD46

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire b-Methyl-D-glucoside

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire a-D-Glucose-6-phosphate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire D-Galacturonate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire Acetate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire a-Hydroxybutyrate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire a-Ketobutyrate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire a-Ketoglutarate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire Succinate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire Bromosuccinate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire Glucuronamide

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire L-Alanine

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire L-Alanyl-glycine

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire L-Asparagine

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire L-Aspartate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire Glycyl-L-aspartate

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire L-Serine

PMID:16095938

ΔnuoI::kan

deletion

Biolog:respiration

unable to respire Uridine

PMID:16095938

ΔnuoI763::kan

PMID:16738554

CGSC:102152


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Notes

Genetic Interactions

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<protect>

Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW2276

Plasmid clone

Shigen

PMID:16769691

Status:Clone OK

Primer 1:GCCACCTTAAAAGAATTGTTAGT

Primer 2:CCtGGTAACAGGCTCTTGACGTC

4C8

Kohara Phage

Genobase

PMID:3038334

E9B9

Kohara Phage

Genobase

PMID:3038334

zfb-223::Tn10

Linked marker

CAG18484 = CGSC7406[5]

est. P1 cotransduction: 86% [6]
Synonyms:zej-223::Tn10

zfd-1::Tn10

Linked marker

CAG18467 = CGSC7408[5]

est. P1 cotransduction: % [6]
Synonyms:zfb-1::Tn10

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG12089

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12089

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001994

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:946757

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2013

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007539

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

NuoI

Synonyms

NADH:ubiquinone oxidoreductase, chain I[1], B2281[2][1], NuoI[2][1] , ECK2275, JW2276, b2281

Product description

NuoI[2][3];

Component of connecting fragment of NADH dehydrogenase I[3]; NADH dehydrogenase I[2][3]

NADH:ubiquinone oxidoreductase subunit I, complex I; NADH dehydrogenase I[4]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

NOT

GO:0005737

cytoplasm

PMID:7607227

IMP: Inferred from Mutant Phenotype

C

Seeded from Riley et al 2006 [1].

See Discussion page for explanation of 'NOT' qualifier.

complete

GO:0005886

plasma membrane

PMID:7607227

IDA: Inferred from Direct Assay

C

The NADH dehydrogenase I complex fractionates with cytoplasmic membranes.

complete

GO:0005506

iron ion binding

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_01351

F

Seeded from EcoCyc (v14.0)

complete

GO:0005506

iron ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0408

F

Seeded from EcoCyc (v14.0)

complete

Contributes to

GO:0003954

NADH dehydrogenase activity

PMID:3122832

IDA: Inferred from Direct Assay

F

Purified NADH dehydrogenase I in membrane vesicles can oxidize NADH.

complete

GO:0051539

4 iron, 4 sulfur cluster binding

PMID:7690854

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P29921

F

E. coli NuoI is 31% identical to the NQO9 subunit of NADH dehydrogenase I from Paracoccus denitrificans. EPR spectra from purified, recombinant, reconstituted NQO9 protein is consistent with the presence of two [4Fe-4S] clusters.[7]

complete

GO:0009055

electron carrier activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001450

F

Seeded from EcoCyc (v14.0)

complete

GO:0030964

NADH dehydrogenase complex

PMID:7607227

IDA: Inferred from Direct Assay

C

The E. coli NADH dehydrogenase complex was purified and the subunits separated by SDS-PAGE. The N-termini of these 6 polypeptides were sequenced after deblocking with methanolic HCl.

complete

GO:0009055

electron carrier activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR017900

F

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR009051

F

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0560

F

Seeded from EcoCyc (v14.0)

complete

GO:0016651

oxidoreductase activity, acting on NADH or NADPH

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR010226

F

Seeded from EcoCyc (v14.0)

complete

GO:0019684

photosynthesis, light reaction

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_01351

P

Seeded from EcoCyc (v14.0)

complete

GO:0019898

extrinsic to membrane

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-9903

C

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc (v14.0)

complete

GO:0048038

quinone binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0874

F

Seeded from EcoCyc (v14.0)

complete

GO:0050136

NADH dehydrogenase (quinone) activity

GOA:spec
GO_REF:0000003

IEA: Inferred from Electronic Annotation

EC:1.6.99.5

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001450

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR009051

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR017900

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0411

F

Seeded from EcoCyc (v14.0)

complete

GO:0051539

4 iron, 4 sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR010226

F

Seeded from EcoCyc (v14.0)

complete

GO:0051539

4 iron, 4 sulfur cluster binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0004

F

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_01351

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR009051

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR010226

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0560

P

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of connecting fragment of NADH dehydrogenase I

could be indirect

Protein

rimJ

PMID:16606699

Experiment(s):EBI-1142422

Protein

gpmB

PMID:16606699

Experiment(s):EBI-1142422

Protein

Subunits of NADH dehydrogenase I

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

Cytoplasm

PMID:9298646, PMID:11416161

EchoLocation:nuoI


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MTLKELLVGF GTQVRSIWMI GLHAFAKRET RMYPEEPVYL PPRYRGRIVL TRDPDGEERC
VACNLCAVAC PVGCISLQKA ETKDGRWYPE FFRINFSRCI FCGLCEEACP TTAIQLTPDF
EMGEYKRQDL VYEKEDLLIS GPGKYPEYNF YRMAGMAIDG KDKGEAENEA KPIDVKSLLP
Length

180

Mol. Wt

20.537 kDa

pI

5.3 (calculated)

Extinction coefficient

24,410 - 25,535 (calc based on 9 Y, 2 W, and 9 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

92..115

PF00037 4Fe-4S binding domain

PMID:19920124

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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=nuoI taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16130216

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:946757

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007539

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0AFD6

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG12089

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12089

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:946757

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001994

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2013

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MG1655

2352

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

926

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

1943

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

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Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

nuoABCEFGHIJKLMN

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Figure courtesy of RegulonDB

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Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:2394452..2394492 source=MG1655 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

</protect>

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b2281 (EcoliWiki Page)

NCBI GEO profiles for nuoI

microarray

GenExpDB:b2281 (EcoliWiki Page)

Summary of data for nuoI from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to nuoI Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG12089

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2013

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2281

EcoGene

EcoGene:EG12089

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001994

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007539

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000012187 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000011836 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G16700 (score: 1.000; bootstrap: 100%)
  • AT1G79010 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000016013 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00042331 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00020636 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000016330 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000019661 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-CDNA-040425-3100 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-040426-2153 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3218 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050522-131 (score: 0.780)
  • ZDB-GENE-050522-131 (score: 0.780)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0169117 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0017567 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17794-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000315774 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000030525 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000001890 (score: 0.660)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000026657 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:2385079 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000006846 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000023526 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000147522 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000149365 (score: 0.727)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00024623001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000045090 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

NUOI

From SHIGELLACYC

E. coli O157

NUOI

From ECOO157CYC

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Notes

Families

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Database Accession Notes

Pfam (EcoliWiki Page)

PF00037 4Fe-4S binding domain

Panther (EcoliWiki Page)

PTHR10849:SF4

Superfamily (EcoliWiki Page)

SUPERFAMILY:54862

EcoCyc

EcoCyc:EG12089

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12089

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001994

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2013

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007539

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 CGSC: The Coli Genetics Stock Center
  6. ↑ 6.0 6.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).
  7. ↑ Yano, T et al. (1999) Characterization of the putative 2x[4Fe-4S]-binding NQO9 subunit of the proton-translocating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans. Expression, reconstitution, and EPR characterization. J. Biol. Chem. 274 28598-605 PubMed

Categories

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