moaA:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

moaA

Gene Synonym(s)

ECK0770, b0781, JW0764, bisA, chlA, chlA1, narA[1], narA

Product Desc.

molybdopterin biosynthesis, protein A[2][3]

MPT synthesis; chlorate resistance protein A[4]

Product Synonyms(s)

molybdopterin biosynthesis protein A[1], B0781[2][1], NarA[2][1], ChlA[2][1], BisA[2][1], MoaA[2][1] , bisA, chlA, ECK0770, JW0764, narA, b0781

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): moaABCDE[2]

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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The moaA 5' UTR has a molybdenum cofactor (Moco) sensitive riboswitch. Radical SAM superfamily. A predicted CueR site near the start of translation imported from RegulonDB has been removed; although there is some evidence of regulation by CueR, this binding site has not been confirmed.[4]



Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

moaA

Mnemonic

Molybdenate

Synonyms

ECK0770, b0781, JW0764, bisA, chlA, chlA1, narA[1], narA

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

17.59 minutes 

MG1655: 816267..817256
<gbrowseImage> name=NC_000913:816267..817256 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 809670..810659
<gbrowseImage> name=NC_012967:809670..810659 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 719235..720224
<gbrowseImage> name=NC_012759:719235..720224 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 817466..818455
<gbrowseImage> name=NC_007779:817466..818455 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 870195..871184
<gbrowseImage> name=NC_010473:870195..871184 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

Coding Start (SO:0000323)

MG1655

816267

Edman degradation

PMID:8361352


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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

moaA(del) (Keio:JW0764)

deletion

deletion

PMID:16738554

Shigen
CGSC8821[5]

moaA(del)::kan

deletion

Biolog:respiration

unable to respire Acetate

PMID:16095938

moaA(del)::kan

deletion

Biolog:respiration

unable to respire L-Serine

PMID:16095938

moaA18

CGSC:4965

moaA15

CGSC:10257

moaA1

CGSC:11070

moaA29

CGSC:12219

moaA31

CGSC:74600

moaA35

CGSC:74714

moaA753(del)::kan

PMID:16738554

CGSC:101898

chlA

Resistant to

Resistant to Chlorate

PMID:4558444

Strain: PK 27

Table 7

chlA

Enzyme Activity

Lack of formate nitrate reductase activity

PMID:4558444

Strain: PK 27

Table 7

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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW0764

Plasmid clone

Shigen

PMID:16769691

Status:Clone OK

Primer 1:GCCGCTTCACAACTGACTGATGC

Primer 2:CCGCCGCCAATGTACGATAAGTT

4H7

Kohara Phage

Genobase

PMID:3038334

3D4

Kohara Phage

Genobase

PMID:3038334

24F9

Kohara Phage

Genobase

PMID:3038334

nadA57::Tn10

Linked marker

CAG12147 = CGSC7351[5]

est. P1 cotransduction: 22% [6]

zbh-29::Tn10

Linked marker

CAG18493 = CGSC7353[5]

est. P1 cotransduction: 85% [6]
Synonyms:zbi-29::Tn10

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG11595

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11595

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001543

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:945392

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1552

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002669

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

MoaA

Synonyms

molybdopterin biosynthesis protein A[1], B0781[2][1], NarA[2][1], ChlA[2][1], BisA[2][1], MoaA[2][1] , bisA, chlA, ECK0770, JW0764, narA, b0781

Product description

molybdopterin biosynthesis, protein A[2][3]

MPT synthesis; chlorate resistance protein A[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

GO:0000166

nucleotide binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000385

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007197

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013785

F

Seeded from EcoCyc (v14.0)

complete

GO:0005506

iron ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0408

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0342

F

Seeded from EcoCyc (v14.0)

complete

GO:0006777

Mo-molybdopterin cofactor biosynthetic process

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_01225

P

Seeded from EcoCyc (v14.0)

complete

GO:0006777

Mo-molybdopterin cofactor biosynthetic process

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR010505

P

Seeded from EcoCyc (v14.0)

complete

GO:0006777

Mo-molybdopterin cofactor biosynthetic process

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013483

P

Seeded from EcoCyc (v14.0)

complete

GO:0006777

Mo-molybdopterin cofactor biosynthetic process

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0501

P

Seeded from EcoCyc (v14.0)

complete

GO:0008152

metabolic process

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013785

P

Seeded from EcoCyc (v14.0)

complete

GO:0019008

molybdopterin synthase complex

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR010505

C

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000385

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013483

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007197

F

Seeded from EcoCyc (v14.0)

complete

GO:0051536

iron-sulfur cluster binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0411

F

Seeded from EcoCyc (v14.0)

complete

GO:0051539

4 iron, 4 sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000385

F

Seeded from EcoCyc (v14.0)

complete

GO:0051539

4 iron, 4 sulfur cluster binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR010505

F

Seeded from EcoCyc (v14.0)

complete

GO:0051539

4 iron, 4 sulfur cluster binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0004

F

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

groL

PMID:15690043

Experiment(s):EBI-882483, EBI-890053

Protein

tufA

PMID:15690043

Experiment(s):EBI-882483

Protein

nadE

PMID:16606699

Experiment(s):EBI-1137952

Protein

groL

PMID:16606699

Experiment(s):EBI-1137952

Protein

yahN

PMID:16606699

Experiment(s):EBI-1137952

Protein

ribB

PMID:16606699

Experiment(s):EBI-1137952

Protein

ydcP

PMID:16606699

Experiment(s):EBI-1137952

Protein

cheA

PMID:16606699

Experiment(s):EBI-1137952

Protein

gyrB

PMID:15690043

Experiment(s):EBI-890053

Protein

rplU

PMID:15690043

Experiment(s):EBI-890053

Protein

rpsG

PMID:15690043

Experiment(s):EBI-890053

Protein

smpB

PMID:15690043

Experiment(s):EBI-890053

Protein

rplU

PMID:19402753

LCMS(ID Probability):99.6

Protein

groL

PMID:19402753

LCMS(ID Probability):99.6 MALDI(Z-score):17.053160

Protein

groS

PMID:19402753

LCMS(ID Probability):99.6 MALDI(Z-score):28.596653

Protein

gyrB

PMID:19402753

LCMS(ID Probability):99.3

Protein

smpB

PMID:19402753

LCMS(ID Probability):99.6

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

cytoplasm

From EcoCyc[3]


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MASQLTDAFA RKFYYLRLSI TDVCNFRCTY CLPDGYKPSG VTNKGFLTVD EIRRVTRAFA
RLGTEKVRLT GGEPSLRRDF TDIIAAVREN DAIRQIAVTT NGYRLERDVA SWRDAGLTGI
NVSVDSLDAR QFHAITGQDK FNQVMAGIDA AFEAGFEKVK VNTVLMRDVN HHQLDTFLNW
IQHRPIQLRF IELMETGEGS ELFRKHHISG QVLRDELLRR GWIHQLRQRS DGPAQVFCHP
DYAGEIGLIM PYEKDFCATC NRLRVSSIGK LHLCLFGEGG VNLRDLLEDD TQQQALEARI
SAALREKKQT HFLHQNNTGI TQNLSYIGG
Length

329

Mol. Wt

37.346 kDa

pI

8.0 (calculated)

Extinction coefficient

28,420 - 29,295 (calc based on 8 Y, 3 W, and 7 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

18..181

PF04055 Radical SAM superfamily

PMID:19920124

Domain

186..313

PF06463 Molybdenum Cofactor Synthesis C

PMID:19920124

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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=moaA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128749

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945392

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002669

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P30745

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11595

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11595

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945392

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001543

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1552

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MG1655

268

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

184

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

313

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

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Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

moaABCDE

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Figure courtesy of RegulonDB

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Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:816247..816287 source=MG1655 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

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Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b0781 (EcoliWiki Page)

NCBI GEO profiles for moaA

microarray

GenExpDB:b0781 (EcoliWiki Page)

Summary of data for moaA from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

GFP Fusion

Intergenic region (815792..816315) fused to gfpmut2.

OpenBioSystems

GFP fusion described in Zaslaver, et al.
Plate:109-AZ07; Well:G1[7]

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Notes

Accessions Related to moaA Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG11595

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1552

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0781

EcoGene

EcoGene:EG11595

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001543

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002669

Escherichia coli str. K-12 substr. MG1655

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Notes

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020395 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000031710 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G31955 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000013792 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00036147 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00009885 (score: 1.000; bootstrap: 100%)
  • WBGene00009908 (score: 0.490)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000002277 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007125 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0186365 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0036122 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA17248-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000016313 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000344794 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000028080 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000016402 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6K248 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000030994 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000015628 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000142287 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00016930001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000017093 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

MOAA

From SHIGELLACYC

E. coli O157

MOAA

From ECOO157CYC

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Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF04055 Radical SAM superfamily

Panther (EcoliWiki Page)

PTHR22960:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:102114

Pfam (EcoliWiki Page)

PF06463 Molybdenum Cofactor Synthesis C

EcoCyc

EcoCyc:EG11595

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11595

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001543

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1552

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002669

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 4.2 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 CGSC: The Coli Genetics Stock Center
  6. ↑ 6.0 6.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).
  7. ↑ Zaslaver, A et al. (2006) A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Nat. Methods 3 623-8 PubMed

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