fusA:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

Quickview

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<protect>

Standard Name

fusA

Gene Synonym(s)

ECK3327, b3340, JW3302, far, fus[1], fus

Product Desc.

elongation factor G[2][3]

Elongation Factor EF-G; GTPase required for translocation from the A-site to the P-site in the ribosome; fusidic acid resistance[4]

Product Synonyms(s)

protein chain elongation factor EF-G, GTP-binding[1], B3340[2][1], Fus[2][1], Far[2][1], FusA[2][1], EF-G[2][1] , ECK3327, far, fus, JW3302, b3340

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fusA-tufA[2], rpsLG-fusA-tufA[2]

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

</protect> See Help:Quickview for help with entering information in the Quickview table. <protect></protect>

Notes

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Binds TrxA (Kumar, 2004). HT_Cmplx23_Cyt: FusA+Tsf+TufA. Ribosomal protein L7/L12 activates the GTPase activity of EF-G (Kischa, 1971; Hamel, 1972; Nechifor, 2007).[4]



Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

fusA

Mnemonic

Fusidic acid

Synonyms

ECK3327, b3340, JW3302, far, fus[1], fus

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

74.78 minutes 

MG1655: 3471536..3469422
<gbrowseImage> name=NC_000913:3469422..3471536 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 3401419..3399305
<gbrowseImage> name=NC_012967:3399305..3401419 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 3356579..3358693
<gbrowseImage> name=NC_012759:3356579..3358693 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 4166902..4169016
<gbrowseImage> name=NC_007779:4166902..4169016 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 3569281..3567167
<gbrowseImage> name=NC_010473:3567167..3569281 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

Coding Start (SO:0000323)

MG1655

3469425

Edman degradation

PMID:6989816
PMID:7042386
PMID:9298646


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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

fusA2

CGSC:17097

fusA1

CGSC:10057


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Notes

Genetic Interactions

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<protect>

Interactor Interaction Allele Score(s) Reference(s) Accessions Notes

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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW3302

Plasmid clone

Shigen

PMID:16769691

Status:Clone OK

Primer 1:GCCGCTCGTACAACACCCATCGC

Primer 2:CCTTTACCACGGGCTTCAATTAC

3F8

Kohara Phage

Genobase

PMID:3038334

smg-3082::Tn10

Linked marker

CAG12071 = CGSC7444[5]

est. P1 cotransduction: 18% [6]
Synonyms:zhb-3082::Tn10, zhd-3082::Tn10

zhf-3084::Tn10

Linked marker

CAG18456 = CGSC7576[5]

est. P1 cotransduction: 26% [6]
Synonyms:zhe-3084::Tn10nnnCAG18456 also carries cysG0 (CGSC).

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10360

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10360

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000353

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:947847

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0355

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010914

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

FusA

Synonyms

protein chain elongation factor EF-G, GTP-binding[1], B3340[2][1], Fus[2][1], Far[2][1], FusA[2][1], EF-G[2][1] , ECK3327, far, fus, JW3302, b3340

Product description

elongation factor G[2][3]

Elongation Factor EF-G; GTPase required for translocation from the A-site to the P-site in the ribosome; fusidic acid resistance[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

GO:0000166

nucleotide binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

Seeded from EcoCyc (v14.0)

complete

GO:0003746

translation elongation factor activity

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00054

F

Seeded from EcoCyc (v14.0)

complete

GO:0003746

translation elongation factor activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004540

F

Seeded from EcoCyc (v14.0)

complete

GO:0003746

translation elongation factor activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0251

F

Seeded from EcoCyc (v14.0)

complete

GO:0003924

GTPase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000795

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00054

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000640

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000795

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004161

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004540

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR005225

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR005517

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0342

F

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00054

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0963

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0086

C

Seeded from EcoCyc (v14.0)

complete

GO:0006412

translation

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0648

P

Seeded from EcoCyc (v14.0)

complete

GO:0006414

translational elongation

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00054

P

Seeded from EcoCyc (v14.0)

complete

GO:0006414

translational elongation

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004540

P

Seeded from EcoCyc (v14.0)

complete

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

nadE

PMID:15690043

Experiment(s):EBI-887996

Protein

tufA

PMID:15690043

Experiment(s):EBI-887996

Protein

apt

PMID:15690043

Experiment(s):EBI-887996

Protein

aroB

PMID:15690043

Experiment(s):EBI-887996

Protein

ydiV

PMID:15690043

Experiment(s):EBI-893622

Protein

ypdI

PMID:15690043

Experiment(s):EBI-893622

Protein

citE

PMID:15690043

Experiment(s):EBI-893622

Protein

htrE

PMID:15690043

Experiment(s):EBI-893622

Protein

rmlA2

PMID:15690043

Experiment(s):EBI-893622

Protein

yfcC

PMID:15690043

Experiment(s):EBI-893622

Protein

rhsA

PMID:16606699

Experiment(s):EBI-1145597

Protein

yeaG

PMID:16606699

Experiment(s):EBI-1145597

Protein

rbsA

PMID:16606699

Experiment(s):EBI-1145597

Protein

ybjD

PMID:16606699

Experiment(s):EBI-1145597

Protein

murF

PMID:19402753

MALDI(Z-score):37.906501

Protein

murG

PMID:19402753

MALDI(Z-score):37.396251

Protein

nadE

PMID:19402753

MALDI(Z-score):39.983110

Protein

htrE

PMID:19402753

LCMS(ID Probability):99.6

Protein

murI

PMID:19402753

MALDI(Z-score):38.761999

Protein

aroB

PMID:19402753

MALDI(Z-score):38.906883

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

Cytoplasm

PMID:7042386

EchoLocation:fusA

cytoplasm

From EcoCyc[3]


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MARTTPIARY RNIGISAHID AGKTTTTERI LFYTGVNHKI GEVHDGAATM DWMEQEQERG
ITITSAATTA FWSGMAKQYE PHRINIIDTP GHVDFTIEVE RSMRVLDGAV MVYCAVGGVQ
PQSETVWRQA NKYKVPRIAF VNKMDRMGAN FLKVVNQIKT RLGANPVPLQ LAIGAEEHFT
GVVDLVKMKA INWNDADQGV TFEYEDIPAD MVELANEWHQ NLIESAAEAS EELMEKYLGG
EELTEAEIKG ALRQRVLNNE IILVTCGSAF KNKGVQAMLD AVIDYLPSPV DVPAINGILD
DGKDTPAERH ASDDEPFSAL AFKIATDPFV GNLTFFRVYS GVVNSGDTVL NSVKAARERF
GRIVQMHANK REEIKEVRAG DIAAAIGLKD VTTGDTLCDP DAPIILERME FPEPVISIAV
EPKTKADQEK MGLALGRLAK EDPSFRVWTD EESNQTIIAG MGELHLDIIV DRMKREFNVE
ANVGKPQVAY RETIRQKVTD VEGKHAKQSG GRGQYGHVVI DMYPLEPGSN PKGYEFINDI
KGGVIPGEYI PAVDKGIQEQ LKAGPLAGYP VVDMGIRLHF GSYHDVDSSE LAFKLAASIA
FKEGFKKAKP VLLEPIMKVE VETPEENTGD VIGDLSRRRG MLKGQESEVT GVKIHAEVPL
SEMFGYATQL RSLTKGRASY TMEFLKYDEA PSNVAQAVIE ARGK
Length

704

Mol. Wt

77.581 kDa

pI

5.2 (calculated)

Extinction coefficient

61,310 - 61,685 (calc based on 19 Y, 6 W, and 3 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Initiator Methionine

1

Removed

UniProt:P0A6M8

Modification Site

692

phosphorylation site at S692

probability greater than 75%

PMID:17938405

Modification Site

636

phosphorylation site at S636

probability greater than 75%

PMID:17938405

Domain

611..698

PF00679 Elongation factor G C-terminus

PMID:19920124

Domain

486..609

PF03764 Elongation factor G, domain IV

PMID:19920124

Domain

8..288

PF00009 Elongation factor Tu GTP binding domain

PMID:19920124

Domain

331..398

PF03144 Elongation factor Tu domain 2

PMID:19920124

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=fusA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

<protect>

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131219

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947847

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010914

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0A6M8

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10360

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10360

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947847

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000353

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0355

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MC4100

5.33E+04

molecules/cell

  • Medium: median data from rich and minimal media
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min):
  • Growth phase: other:

emPAI

PMID:18304323

Protein

Ecoli K-12

316.368+/-3.11

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

Single Molecule Fluorescence

PMID:20671182

mRNA

Ecoli K-12

0.91599+/-0.04695

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

by FISH

PMID:20671182

mRNA

Ecoli K-12

2.805581835

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

by RNA_Seq

PMID:20671182

Protein

E. coli K-12 EMG2

1080

molecules/cell

  • Medium: MOPS glucose minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • Growth phase: Exponential
  • OD: OD600 = 0.2 to 0.25
  • other: aerated

Quantitative protein sequencing

Spot ID: M55

PMID: 9298646

Protein

E. coli K-12 MG1655

84151

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

15930

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

55700

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

fusA-tufA

rpsLG-fusA-tufA

Figure courtesy of RegulonDB

</protect>

Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:3471516..3471556 source=MG1655 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

</protect>

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference


Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b3340 (EcoliWiki Page)

NCBI GEO profiles for fusA

microarray

GenExpDB:b3340 (EcoliWiki Page)

Summary of data for fusA from multiple microarray studies


Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

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Notes

Accessions Related to fusA Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10360

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0355

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b3340

EcoGene

EcoGene:EG10360

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000353

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010914

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010217 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000021136 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G62750 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000039865 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00025768 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00009246 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013270 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006920 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-5128 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-262 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-261 (score: 0.997)
  • ZDB-GENE-030131-8112 (score: 0.260)
  • ZDB-GENE-040426-1569 (score: 0.116)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0201691 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0031898 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18263-PA (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000015672 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000264263 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000026295 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000019560 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Mus musculus

  • MGI:107339 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Oryza gramene

  • Q9FE64 (score: 1.000; bootstrap: 99%)
  • Q94I51 (score: 0.968)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000026799 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000040081 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YLR069C (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC13061c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000136434 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00014776001 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000030761 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

FUSA

From SHIGELLACYC

E. coli O157

FUSA

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03144 Elongation factor Tu domain 2

Pfam (EcoliWiki Page)

PF00009 Elongation factor Tu GTP binding domain

Pfam (EcoliWiki Page)

PF03764 Elongation factor G, domain IV

Pfam (EcoliWiki Page)

PF00679 Elongation factor G C-terminus

Superfamily (EcoliWiki Page)

SUPERFAMILY:50447

Panther (EcoliWiki Page)

PTHR23115:SF66

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Superfamily (EcoliWiki Page)

SUPERFAMILY:54211

Superfamily (EcoliWiki Page)

SUPERFAMILY:54980

Superfamily (EcoliWiki Page)

SUPERFAMILY:54980

EcoCyc

EcoCyc:EG10360

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10360

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000353

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0355

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010914

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. 4.0 4.1 4.2 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. 5.0 5.1 CGSC: The Coli Genetics Stock Center
  6. 6.0 6.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

Categories

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