ftsA:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

ftsA

Gene Synonym(s)

ECK0095, b0094, JW0092, divA[1], divA

Product Desc.

essential cell division protein FtsA[2][3]

Cell division and septation protein, specific role unknown; recruited to FtsZ ring[4]

Product Synonyms(s)

ATP-binding cell division protein involved in recruitment of FtsK to Z ring[1], B0094[2][1], DivA[2][1], FtsA[2][1] , divA, ECK0095, JW0092, b0094

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ftsAZ[2], mraZW-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ[2], ftsQAZ[2], OP00295

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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FtsA is an essential gene. ftsA* mutants no longer require zipA. Divisome.[4]



Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

ftsA

Mnemonic

Filamentation, temperature sensitive

Synonyms

ECK0095, b0094, JW0092, divA[1], divA

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

2.24 minutes 

MG1655: 103982..105244
<gbrowseImage> name=NC_000913:103982..105244 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 106786..108048
<gbrowseImage> name=NC_012967:106786..108048 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 103981..105243
<gbrowseImage> name=NC_012759:103981..105243 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 103982..105244
<gbrowseImage> name=NC_007779:103982..105244 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 78086..79348
<gbrowseImage> name=NC_010473:78086..79348 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

FtsA*

R286W

Growth Phenotype

gain of function, can suppress cell division mutants, can compensate for a loss of ZipA

Below normal levels of FtsZ, normal cell division is not permitted

Cells are 27% shorter during exponential growth at 32C

Enhances Z-ring assembly kinetics without increasing total levels of FtsZ

  • PMID:12634424
  • PMID:16194242

PMID:17542921 PMID:17322202

suppressor of loss of zipA
also suppresses

  • loss of ftsK
  • filamentation from MinC overproduction

ftsA1882(ts)

Growth Phenotype

forms small chains of swollen cells at 42 C; after a shift back to permissive temperature minicell-like cells are formed by the formation of aberrant constrictions

PMID:1097423 PMID:4591963 PMID:338600

CGSC:10693

part of AX621 strain

ftsA16(Am)

Nonsense Mutation

Growth Phenotype

division stops after about 20 minutes at 42 C

PMID:374336

CGSC:25115

amber (UAG) mutation

ftsA2(ts)

temperature sensitive

CGSC:25120

ftsA3(ts)

temperature sensitive

PMID:6365891

CGSC:25123

forms abortive septa

ftsA27(ts)

temperature sensitive

CGSC:91085

ftsA6

PMID:3280547

does not react to permissive temperature like other mutations

ftsA12(ts)

Growth Phenotype

stops dividing at 42 C


PMID:8509333

PMID:7885232

PMID:8509333

CGSC:91083

ftsA12(ts)

Cell Shape

makes non-septated filaments at 42 C

PMID:8509333

PMID:7885232

CGSC:91083

ftsA10

Growth Phenotype

resistant to UV irradiation a temperature sensitive cell division mutant

PMID:14237063 PMID:3032902

ftsA16(Am)

Nonsense Mutation

Cell Shape

at 42 C indentations where septation would occur if grown at permissive temperature are seen

PMID:374336

CGSC:25115

amber (UAG) mutation

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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW0092

Plasmid clone

Shigen

PMID:16769691

Status:Clone OK

Primer 1:GCCATCAAGGCGACGGACAGAAA

Primer 2:CCAAACTCTTTTCGCAGCCAACT

6F3

Kohara Phage

Genobase

PMID:3038334

15B8

Kohara Phage

Genobase

PMID:3038334

leuO3051::Tn10

Linked marker

CAG12095 = CGSC7324[5]

est. P1 cotransduction: 47% [6]
Synonyms:zab-3051::Tn10 nnnThe start of leuO was reannotated by Riley et al. (2006).

zad-220::Tn10

Linked marker

CAG12025 = CGSC7326[5]

est. P1 cotransduction: 14% [6]

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10339

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10339

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000333

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:944778

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0335

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000331

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

FtsA

Synonyms

ATP-binding cell division protein involved in recruitment of FtsK to Z ring[1], B0094[2][1], DivA[2][1], FtsA[2][1] , divA, ECK0095, JW0092, b0094

Product description

essential cell division protein FtsA[2][3]

Cell division and septation protein, specific role unknown; recruited to FtsZ ring[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

GO:0000917

barrier septum formation

P

Missing: evidence, reference

GO:0007049

cell cycle

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003494

P

Seeded from EcoCyc (v14.0)

complete

GO:0007049

cell cycle

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR020823

P

Seeded from EcoCyc (v14.0)

complete

GO:0007049

cell cycle

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0131

P

Seeded from EcoCyc (v14.0)

complete

GO:0032155

cell division site part

PMID:8917533

IDA: Inferred from Direct Assay

C

complete

GO:0051301

cell division

PMID:4583216

IMP: Inferred from Mutant Phenotype

P

complete

GO:0008360

regulation of cell shape

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0133

P

Seeded from EcoCyc (v14.0)

complete

GO:0051301

cell division

PMID:8917533

IMP: Inferred from Mutant Phenotype

P

complete

GO:0000910

cytokinesis

PMID:8917533

IMP: Inferred from Mutant Phenotype

P

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

aceE

PMID:15690043

Experiment(s):EBI-881093

Protein

dnaJ

PMID:15690043

Experiment(s):EBI-881093

Protein

dnaK

PMID:15690043

Experiment(s):EBI-881093

Protein

mreB

PMID:15690043

Experiment(s):EBI-881093

Protein

tufA

PMID:15690043

Experiment(s):EBI-881093, EBI-888109

Protein

accD

PMID:15690043

Experiment(s):EBI-888109

Protein

cutA

PMID:15690043

Experiment(s):EBI-888109

Protein

nusG

PMID:15690043

Experiment(s):EBI-888109

Protein

rho

PMID:15690043

Experiment(s):EBI-888109

Protein

rplK

PMID:15690043

Experiment(s):EBI-888109

Protein

rplL

PMID:15690043

Experiment(s):EBI-888109

Protein

rplT

PMID:15690043

Experiment(s):EBI-888109

Protein

rplU

PMID:15690043

Experiment(s):EBI-888109

Protein

rpsB

PMID:15690043

Experiment(s):EBI-888109

Protein

slyD

PMID:15690043

Experiment(s):EBI-888109

Protein

tdcE

PMID:15690043

Experiment(s):EBI-888109

Protein

yfiF

PMID:15690043

Experiment(s):EBI-888109

Protein

yhhA

PMID:15690043

Experiment(s):EBI-888109

Protein

murB

PMID:19402753

MALDI(Z-score):39.730525

Protein

tufB

PMID:19402753

MALDI(Z-score):21.725028

Protein

tdcE

PMID:19402753

LCMS(ID Probability):99.0

Protein

cutA

PMID:19402753

LCMS(ID Probability):99.0

Protein

yhhA

PMID:19402753

LCMS(ID Probability):99.0

FtsZ

Protein

ftsA

PMID:11053380

yeast two-hybrid assay

Protein

ftsK44

ftsA R286W supresses ftsK44

PMID:16194242


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

Inner membrane

localizes to septum, dependent on interaction with FtsZ


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MIKATDRKLV VGLEIGTAKV AALVGEVLPD GMVNIIGVGS CPSRGMDKGG VNDLESVVKC
VQRAIDQAEL MADCQISSVY LALSGKHISC QNEIGMVPIS EEEVTQEDVE NVVHTAKSVR
VRDEHRVLHV IPQEYAIDYQ EGIKNPVGLS GVRMQAKVHL ITCHNDMAKN IVKAVERCGL
KVDQLIFAGL ASSYSVLTED ERELGVCVVD IGGGTMDIAV YTGGALRHTK VIPYAGNVVT
SDIAYAFGTP PSDAEAIKVR HGCALGSIVG KDESVEVPSV GGRPPRSLQR QTLAEVIEPR
YTELLNLVNE EILQLQEKLR QQGVKHHLAA GIVLTGGAAQ IEGLAACAQR VFHTQVRIGA
PLNITGLTDY AQEPYYSTAV GLLHYGKESH LNGEAEVEKR VTASVGSWIK RLNSWLRKEF
Length

420

Mol. Wt

45.328 kDa

pI

6.2 (calculated)

Extinction coefficient

28,880 - 30,005 (calc based on 12 Y, 2 W, and 9 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

10..196

PF02491 Cell division protein FtsA

PMID:19920124

Domain

206..382

PF02491 Cell division protein FtsA

PMID:19920124

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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=ftsA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128087

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:944778

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000331

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0ABH0

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10339

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10339

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:944778

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000333

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0335

Escherichia coli str. K-12 substr. MG1655

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Notes

Structure resembles actin, plus an extra domain.

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli D1210

175

molecules/cell

  • Medium: LB broth
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min): Doubling time (per hour) = 1.67
  • Growth phase: other:

quantitative western

PMID:1406287

Protein

E. coli D1210

200

molecules/cell

  • Medium: LB + 0.4% Glucose
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min): Doubling time (per hour) = 2.00
  • Growth phase: other:

quantitative western

PMID:1406287

Protein

E. coli D1210

127

molecules/cell

  • Medium: M9 + 1% casamino acids + 0.4% glucose
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min): Doubling time (per hour) = 1.62
  • Growth phase: other:

quantitative western

PMID:1406287

Protein

E. coli D1210

100

molecules/cell

  • Medium: M9 + 1% casamino acids + 0.4% glycerol
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min): Doubling time (per hour) = 1.03
  • Growth phase: other:

quantitative western

PMID:1406287

Protein

E. coli D1210

74

molecules/cell

  • Medium: M9 + 0.4% glucose
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min): Doubling time (per hour) = 0.52
  • Growth phase: other:

quantitative western

PMID:1406287

Protein

E. coli D1210

48

molecules/cell

  • Medium: M9 + 0.4% glycerol
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min): Doubling time (per hour) = 0.48
  • Growth phase: other:

quantitative western

PMID:1406287

Protein

E. coli D1210

45

molecules/cell

  • Medium: M9 + 0.4% succinate
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min): Doubling time (per hour) = 0.44
  • Growth phase: other:

quantitative western

PMID:1406287

Protein

E. coli D1210

43

molecules/cell

  • Medium: M9 + 0.4% acetate
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min): Doubling time (per hour) = 0.41
  • Growth phase: other:

quantitative western

PMID:1406287

Protein

Ecoli K-12

58.922+/-0.223

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

Single Molecule Fluorescence

PMID:20671182

mRNA

Ecoli K-12

0.161648177

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

by RNA_Seq

PMID:20671182

Protein

E. coli K-12 MG1655

984

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

575

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

1013

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

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Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

ftsAZ

mraZW-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ

ftsQAZ

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Figure courtesy of RegulonDB

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Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Overproduction of FtsA causes long non-septate filaments to form and inhibits normal cell septation. [7]

Overproduction does block division but transcription from cloned fts promoters is not further repressed. [8]

RcsB effects the efficiency of the transcription of ftsA1p. Specifically, causing it too increase in efficiency as more of RcsB is added. [9]

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:103962..104002 source=MG1655 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

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Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b0094 (EcoliWiki Page)

NCBI GEO profiles for ftsA

microarray

GenExpDB:b0094 (EcoliWiki Page)

Summary of data for ftsA from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to ftsA Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10339

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0335

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0094

EcoGene

EcoGene:EG10339

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000333

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000331

Escherichia coli str. K-12 substr. MG1655

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Notes

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Shigella flexneri

FTSA

From SHIGELLACYC

E. coli O157

FTSA

From ECOO157CYC

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Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02491 Cell division protein FtsA

Pfam (EcoliWiki Page)

PF02491 Cell division protein FtsA

Superfamily (EcoliWiki Page)

SUPERFAMILY:53067

Superfamily (EcoliWiki Page)

SUPERFAMILY:53067

EcoCyc

EcoCyc:EG10339

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10339

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000333

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0335

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000331

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 4.2 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 CGSC: The Coli Genetics Stock Center
  6. ↑ 6.0 6.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).
  7. ↑ Wang, HC & Gayda, RC (1990) High-level expression of the FtsA protein inhibits cell septation in Escherichia coli K-12. J. Bacteriol. 172 4736-40 PubMed
  8. ↑ Dewar, SJ et al. (1989) Transcriptional regulation of cell division genes in Escherichia coli. Mol. Microbiol. 3 1371-7 PubMed
  9. ↑ Carballès, F et al. (1999) Regulation of Escherichia coli cell division genes ftsA and ftsZ by the two-component system rcsC-rcsB. Mol. Microbiol. 34 442-50 PubMed

Categories

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