aspC:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

aspC

Gene Synonym(s)

ECK0919, b0928, JW0911[1], JW0911

Product Desc.

AspC[2][3];

Component of aspartate transaminase[2]; aspartate aminotransferase, PLP-dependent[3]

Aspartate aminotransferase, AspAT; kynurenine aminotransferase; glutamine transaminase K[4]

Product Synonyms(s)

aspartate aminotransferase, PLP-dependent[1], B0928[2][1], AspC[2][1] , ECK0919, JW0911, b0928

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): aspC[2]

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

aspC

Mnemonic

Aspartate

Synonyms

ECK0919, b0928, JW0911[1], JW0911

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

21.2 minutes 

MG1655: 984932..983742
<gbrowseImage> name=NC_000913:983742..984932 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 1002801..1001611
<gbrowseImage> name=NC_012967:1001611..1002801 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 886710..887900
<gbrowseImage> name=NC_012759:886710..887900 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 986131..984941
<gbrowseImage> name=NC_007779:984941..986131 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 1038860..1037670
<gbrowseImage> name=NC_010473:1037670..1038860 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

Coding Start (SO:0000323)

MG1655

983742

Edman degradation

PMID:387032
PMID:3298240
PMID:6378205
PMID:9298646
PMID:11736651


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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

aspCH133N

H133N

Auxotrophies

Decreases to 60% in maximum rate of the overall reactions in both directions

seeded from UniProt:P00509

aspCR374F,Y

R374F,Y

Auxotrophies

Second-order rate constants are reduced by >5 orders of magnitude

seeded from UniProt:P00509

aspCH133A

H133A

Auxotrophies

Slight increase in maximum velocity of the overall transamination reaction between aspartate and 2-oxoglutarate

seeded from UniProt:P00509

aspCY65F,S

Y65F,S

Auxotrophies

Slight changes in activity

seeded from UniProt:P00509

ΔaspC (Keio:JW0911)

deletion

deletion

Auxotrophies

Still Asp+. Mutations in aspC, tyrB, and ilvE are required before E. coli K-12 becomes auxotrophic for aspartate.[5]

PMID:16738554

Shigen

CGSC8924[6]

aspC::Tn5KAN-2 (FB20252)

Insertion at nt 615 in Minus orientation

Auxotrophies

PMID:15262929

E. coli Genome Project:FB20252

does not contain pKD46

aspC13

Auxotrophies

PMID:15983

CGSC:5110

aspC25

Auxotrophies

CGSC:5114

ΔaspC745::kan

deletion

deletion

Auxotrophies

PMID:16738554

CGSC:100112


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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW0911

Plasmid clone

Shigen

PMID:16769691

Status:Clone OK

Primer 1:GCCTTTGAGAACATTACCGCCGC

Primer 2:CCCAGCACTGCCACAATCGCTTC

E1D1

Kohara Phage

Genobase

PMID:3038334

11F5

Kohara Phage

Genobase

PMID:3038334

zca-1230::Tn10

Linked marker

CAG18478 = CGSC7356[6]

est. P1 cotransduction: 21% [7]
Synonyms:zbj-1230::Tn10

zcb-3059::Tn10

Linked marker

CAG12094 = CGSC7358[6]

est. P1 cotransduction: 51% [7]

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10096

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10096

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000092

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:945553

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0094

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003150

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

AspC

Synonyms

aspartate aminotransferase, PLP-dependent[1], B0928[2][1], AspC[2][1] , ECK0919, JW0911, b0928

Product description

AspC[2][3];

Component of aspartate transaminase[2]; aspartate aminotransferase, PLP-dependent[3]

Aspartate aminotransferase, AspAT; kynurenine aminotransferase; glutamine transaminase K[4]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

GO:0004069

L-aspartate:2-oxoglutarate aminotransferase activity

GOA:spec
GO_REF:0000003

IEA: Inferred from Electronic Annotation

EC:2.6.1.1

F

Seeded from EcoCyc (v14.0)

complete

GO:0005829

cytosol

PMID:16858726

IDA: Inferred from Direct Assay

C

Seeded from EcoCyc (v14.0)

complete

GO:0004838

L-tyrosine:2-oxoglutarate aminotransferase activity

PMID:15983

IMP: Inferred from Mutant Phenotype

F

Table 4

complete

GO:0030170

pyridoxal phosphate binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004838

F

Seeded from EcoCyc (v14.0)

complete

GO:0004069

L-aspartate:2-oxoglutarate aminotransferase activity

PMID:15983

IMP: Inferred from Mutant Phenotype

F

Table 3

complete

GO:0030170

pyridoxal phosphate binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004839

F

Seeded from EcoCyc (v14.0)

complete

GO:0009094

L-phenylalanine biosynthetic process

PMID:15983

IGI: Inferred from Genetic Interaction

EcoliWiki:ilvE|EcoliWiki:tyrB

P

complete

GO:0030170

pyridoxal phosphate binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015421

F

Seeded from EcoCyc (v14.0)

complete

GO:0030170

pyridoxal phosphate binding

PMID:352693

IDA: Inferred from Direct Assay

F

complete

GO:0033585

L-phenylalanine biosynthetic process from chorismate via phenylpyruvate

PMID:15983

IMP: Inferred from Mutant Phenotype

P

Seeded from EcoCyc (v14.0)

complete

GO:0042803

protein homodimerization activity

PMID:352693

IDA: Inferred from Direct Assay

F

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

PMID:352693

IDA: Inferred from Direct Assay

C

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of aspartate transaminase

could be indirect

Protein

nadE

PMID:16606699

Experiment(s):EBI-1138400

Protein

nuoC

PMID:19402753

LCMS(ID Probability):99.6

Protein

tig

PMID:19402753

LCMS(ID Probability):99.6

Protein

glf

PMID:19402753

LCMS(ID Probability):99.6

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

Cytoplasm

PMID:3521591

EchoLocation:aspC


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MFENITAAPA DPILGLADLF RADERPGKIN LGIGVYKDET GKTPVLTSVK KAEQYLLENE
TTKNYLGIDG IPEFGRCTQE LLFGKGSALI NDKRARTAQT PGGTGALRVA ADFLAKNTSV
KRVWVSNPSW PNHKSVFNSA GLEVREYAYY DAENHTLDFD ALINSLNEAQ AGDVVLFHGC
CHNPTGIDPT LEQWQTLAQL SVEKGWLPLF DFAYQGFARG LEEDAEGLRA FAAMHKELIV
ASSYSKNFGL YNERVGACTL VAADSETVDR AFSQMKAAIR ANYSNPPAHG ASVVATILSN
DALRAIWEQE LTDMRQRIQR MRQLFVNTLQ EKGANRDFSF IIKQNGMFSF SGLTKEQVLR
LREEFGVYAV ASGRVNVAGM TPDNMAPLCE AIVAVL
Length

396

Mol. Wt

43.573 kDa

pI

5.6 (calculated)

Extinction coefficient

43,890 - 44,515 (calc based on 11 Y, 5 W, and 5 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

26..392

PF00155 Aminotransferase class I and II

PMID:19920124

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=aspC taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128895

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945553

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003150

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P00509

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10096

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10096

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945553

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000092

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0094

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MC4100

2.11E+03

molecules/cell

  • Medium: median data from rich and minimal media
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min):
  • Growth phase: other:

emPAI

PMID:18304323

Protein

Ecoli K-12

248.055+/-2.206

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

Single Molecule Fluorescence

PMID:20671182

mRNA

Ecoli K-12

0.25942+/-0.02462

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

by FISH

PMID:20671182

mRNA

Ecoli K-12

0.314705882

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

by RNA_Seq

PMID:20671182

Protein

E. coli K-12 EMG2

460

molecules/cell

  • Medium: MOPS glucose minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • Growth phase: Exponential
  • OD: OD600 = 0.2 to 0.25
  • other: aerated

Quantitative protein sequencing

Spot ID: M66�2

PMID: 9298646

Protein

E. coli K-12 MG1655

4498

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

7192

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

3526

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

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Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

aspC

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Figure courtesy of RegulonDB

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Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:984912..984952 source=MG1655 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

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Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b0928 (EcoliWiki Page)

NCBI GEO profiles for aspC

microarray

GenExpDB:b0928 (EcoliWiki Page)

Summary of data for aspC from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

GFP Fusion

Intergenic region (984862..985140) fused to gfpmut2.

OpenBioSystems

GFP fusion described in Zaslaver, et al.
Plate:109-AZ01; Well:E7[8]

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Notes

Accessions Related to aspC Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10096

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0094

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0928

EcoGene

EcoGene:EG10096

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000092

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003150

Escherichia coli str. K-12 substr. MG1655

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Notes

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000016571 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000011707 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000030487 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G19550 (score: 1.000; bootstrap: 100%)
  • AT5G11520 (score: 0.734)
  • AT1G62800 (score: 0.656)
  • AT4G31990 (score: 0.206)
  • AT2G30970 (score: 0.141)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000009440 (score: 1.000; bootstrap: 99%)
  • ENSBTAP00000015873 (score: 0.118)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00027571 (score: 1.000; bootstrap: 99%)
  • WBGene00040842 (score: 0.508)
  • WBGene00036252 (score: 0.063)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00016652 (score: 1.000; bootstrap: 99%)
  • WBGene00015778 (score: 0.498)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000012308 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000013922 (score: 0.139)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007609 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-7917 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1516 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3650 (score: 0.783)
  • ZDB-GENE-040426-2703 (score: 0.783)
  • ZDB-CDNA-040425-2950 (score: 0.116)
  • ZDB-GENE-040426-2003 (score: 0.116)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0230092 (score: 1.000; bootstrap: 100%)
  • DDB0230093 (score: 0.107)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0001125 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18050-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000003646 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000012086 (score: 0.156)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000245206 (score: 1.000; bootstrap: 99%)
  • ENSP00000239123 (score: 0.147)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000007886 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000025373 (score: 0.167)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000017818 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000004345 (score: 0.139)

From Inparanoid:20070104

Mus musculus

  • MGI:95792 (score: 1.000; bootstrap: 100%)
  • MGI:95791 (score: 0.133)

From Inparanoid:20070104

Oryza gramene

  • P37833 (score: 1.000; bootstrap: 100%)
  • Q42391 (score: 1.000; bootstrap: 100%)
  • Q5JMF4 (score: 1.000; bootstrap: 100%)
  • Q7F594 (score: 1.000; bootstrap: 100%)
  • Q84V24 (score: 0.236)
  • Q6KAJ2 (score: 0.236)
  • Q42425 (score: 0.225)
  • Q43057 (score: 0.136)
  • Q6EUS6 (score: 0.125)
  • Q43305 (score: 0.125)
  • Q5Z7I8 (score: 0.108)
  • O48599 (score: 0.102)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000013976 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000004968 (score: 0.138)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000015956 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000051464 (score: 0.742)
  • ENSRNOP00000041826 (score: 0.714)
  • ENSRNOP00000022309 (score: 0.132)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YLR027C (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC7251 (score: 1.000; bootstrap: 100%)
  • SPAC10F63c (score: 0.115)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000130060 (score: 0.146)
  • NEWSINFRUP00000162658 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000128916 (score: 0.131)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003870001 (score: 1.000; bootstrap: 99%)
  • GSTENP00010691001 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000034675 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

ASPC

From SHIGELLACYC

E. coli O157

ASPC

From ECOO157CYC

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Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00155 Aminotransferase class I and II

Superfamily (EcoliWiki Page)

SUPERFAMILY:53383

EcoCyc

EcoCyc:EG10096

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10096

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000092

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0094

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003150

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Gelfand, DH & Steinberg, RA (1977) Escherichia coli mutants deficient in the aspartate and aromatic amino acid aminotransferases. J. Bacteriol. 130 429-40 PubMed
  6. ↑ 6.0 6.1 6.2 CGSC: The Coli Genetics Stock Center
  7. ↑ 7.0 7.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).
  8. ↑ Zaslaver, A et al. (2006) A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Nat. Methods 3 623-8 PubMed

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