parC:Gene Product(s): Difference between revisions

Standard name	ParC
Synonyms	DNA topoisomerase IV, subunit A^[1], B3019^[2]^[1], ParC^[2]^[1]
Product description	topoisomerase IV subunit A^[2]^[3]; Component of dimer of topoisomerase IV subunit A^[3]; topoisomerase IV^[3]
EC number (for enzymes)	5.99.1.-^[1]
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki. See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
	GO:0003677	DNA binding	GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000004	IEA: Inferred from Electronic Annotation	InterPro:IPR002205 InterPro:IPR005742 InterPro:IPR006691 InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013760 SP_KW:KW-0238	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0003916	DNA topoisomerase activity	GO_REF:0000002 GO_REF:0000004	IEA: Inferred from Electronic Annotation	InterPro:IPR006691 SP_KW:KW-0799	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0003918	DNA topoisomerase (ATP-hydrolyzing) activity	GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR002205 InterPro:IPR005742 InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013760	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005524	ATP binding	GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR002205 InterPro:IPR005742 InterPro:IPR006691 InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013760	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005694	chromosome	GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR002205 InterPro:IPR005742 InterPro:IPR006691 InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013760	C	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0006265	DNA topological change	GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002 GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR002205 InterPro:IPR005742 InterPro:IPR006691 InterPro:IPR013757 InterPro:IPR013758 InterPro:IPR013760	P	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0006268	DNA unwinding during replication	GO_REF:0000002 GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR005742 InterPro:IPR006691	P	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0016020	membrane	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0472	C	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0016853	isomerase activity	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0413	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005737	cytoplasm	PMID:12535532^[5]	IDA: Inferred from Direct Assay		C	Seeded from EcoCyc 11.1^[3].	complete
	GO:0006261	DNA-dependent DNA replication	PMID:2170028^[6]	IDA: Inferred from Direct Assay		P	Seeded from EcoCyc 11.1^[3].	complete
	GO:0003918	DNA topoisomerase (ATP-hydrolyzing) activity		IDA: Inferred from Direct Assay		F		required field missing
	GO:0007059	chromosome segregation	PMID:2842295^[7]	IMP: Inferred from Mutant Phenotype		P		complete
Contributes to	GO:0003916	DNA topoisomerase activity	PMID:1334483^[8]	IDA: Inferred from Direct Assay		F		complete
	GO:0019897	extrinsic to plasma membrane	PMID:1334483^[8]	IDA: Inferred from Direct Assay		C	in the presence of DNA	complete
	GO:0005737	cytoplasm	PMID:1334483^[8]	IDA: Inferred from Direct Assay		C	in the presence of Mg2+	complete
Contributes to	GO:0003918	DNA topoisomerase (ATP-hydrolyzing) activity	PMID:8227000^[9]	IDA: Inferred from Direct Assay		F		complete
	GO:0009330	DNA topoisomerase complex (ATP-hydrolyzing)	PMID:8227000^[9]	IDA: Inferred from Direct Assay		C		complete
	GO:0006265	DNA topological change	PMID:8227000^[9]	IDA: Inferred from Direct Assay		P		complete
	GO:0003677	DNA binding	PMID:18023670^[10]	IDA: Inferred from Direct Assay		F		complete
	GO:0030541	plasmid partitioning	PMID:8104339^[11]	IDA: Inferred from Direct Assay		P		complete
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
Protein	Subunits of dimer of topoisomerase IV subunit A	could be indirect
Protein	yciH		PMID:16606699^[12]	Experiment(s):EBI-1144556
Protein	rplB		PMID:16606699^[12]	Experiment(s):EBI-1144556
Protein	rplA		PMID:16606699^[12]	Experiment(s):EBI-1144556
Protein	pflD		PMID:16606699^[12]	Experiment(s):EBI-1144556
Protein	aceF		PMID:15690043^[13]	Experiment(s):EBI-883350
Protein	lpdA		PMID:15690043^[13]	Experiment(s):EBI-883350
Protein	mreB		PMID:15690043^[13]	Experiment(s):EBI-883350
Protein	gyrA		PMID:15690043^[13]	Experiment(s):EBI-883350
Protein	secA		PMID:15690043^[13]	Experiment(s):EBI-883350
Protein	murF		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	rfaQ		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	rplL		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	rplM		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	rplV		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	rpmA		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	rpmG		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	rpsB		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	rpsJ		PMID:15690043^[13]	Experiment(s):EBI-890645
Protein	Subunits of topoisomerase IV	could be indirect
Protein	slyD		PMID:15690043^[13]	Experiment(s):EBI-890645
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Notes

Localization

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Compartment	Description	Evidence	Notes
cytoplasm			From EcoCyc^[3]
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence	at EcoCyc MSDMAERLAL HEFTENAYLN YSMYVIMDRA LPFIGDGLKP VQRRIVYAMS ELGLNASAKF KKSARTVGDV LGKYHPHGDS ACYEAMVLMA QPFSYRYPLV DGQGNWGAPD DPKSFAAMRY TESRLSKYSE LLLSELGQGT ADWVPNFDGT LQEPKMLPAR LPNILLNGTT GIAVGMATDI PPHNLREVAQ AAIALIDQPK TTLDQLLDIV QGPDYPTEAE IITSRAEIRK IYENGRGSVR MRAVWKKEDG AVVISALPHQ VSGARVLEQI AAQMRNKKLP MVDDLRDESD HENPTRLVIV PRSNRVDMDQ VMNHLFATTD LEKSYRINLN MIGLDGRPAV KNLLEILSEW LVFRRDTVRR RLNYRLEKVL KRLHILEGLL VAFLNIDEVI EIIRNEDEPK PALMSRFGLT ETQAEAILEL KLRHLAKLEE MKIRGEQSEL EKERDQLQGI LASERKMNNL LKKELQADAQ AYGDDRRSPL QEREEAKAMS EHDMLPSEPV TIVLSQMGWV RSAKGHDIDA PGLNYKAGDS FKAAVKGKSN QPVVFVDSTG RSYAIDPITL PSARGQGEPL TGKLTLPPGA TVDHMLMESD DQKLLMASDA GYGFVCTFND LVARNRAGKA LITLPENAHV MPPVVIEDAS DMLLAITQAG RMLMFPVSDL PQLSKGKGNK IINIPSAEAA RGEDGLAQLY VLPPQSTLTI HVGKRKIKLR PEELQKVTGE RGRRGTLMRG LQRIDRVEID SPRRASSGDS EE
Mol. Wt	83.83 kDa (calc) ^[2]
pI
Extinction coefficient	55810 - 56060 (calc based on 19 Y, 5 W, and 2 C residues)
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Domains/Motifs/Modification Sites

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Type	Residues	Description	Notes
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Structure

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Structures

Models

View models at:

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:EG10686-MONOMER
SwissModel (EcoliWiki Page)	SwissModel:P0AFI2
UniProt (EcoliWiki Page)	UniProt:P0AFI2
PFAM (EcoliWiki Page)	PFAM:PF00521
RefSeq (EcoliWiki Page)	RefSeq:NP_417491
ModBase (EcoliWiki Page)	ModBase:P0AFI2
PDB (EcoliWiki Page)	PDB:1ZVT
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Notes

Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 ^3.3 ^3.4 ^3.5 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 ^4.6 ^4.7 ^4.8 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ Espeli, O et al. (2003) Temporal regulation of topoisomerase IV activity in E. coli. Mol. Cell 11 189-201 PubMed
↑ Kato, J et al. (1990) New topoisomerase essential for chromosome segregation in E. coli. Cell 63 393-404 PubMed
↑ Kato, J et al. (1988) Gene organization in the region containing a new gene involved in chromosome partition in Escherichia coli. J. Bacteriol. 170 3967-77 PubMed
↑ ^8.0 ^8.1 ^8.2 Kato, J et al. (1992) Purification and characterization of DNA topoisomerase IV in Escherichia coli. J. Biol. Chem. 267 25676-84 PubMed
↑ ^9.0 ^9.1 ^9.2 Peng, H & Marians, KJ (1993) Escherichia coli topoisomerase IV. Purification, characterization, subunit structure, and subunit interactions. J. Biol. Chem. 268 24481-90 PubMed
↑ Nakajima, T et al. (2007) The evaluation of lymph node metastasis by endobronchial ultrasound-guided transbronchial needle aspiration: crucial for selection of surgical candidates with metastatic lung tumors. J Thorac Cardiovasc Surg 134 1485-90 PubMed
↑ Peng, H & Marians, KJ (1993) Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro. Proc. Natl. Acad. Sci. U.S.A. 90 8571-5 PubMed
↑ ^12.0 ^12.1 ^12.2 ^12.3 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
↑ ^13.00 ^13.01 ^13.02 ^13.03 ^13.04 ^13.05 ^13.06 ^13.07 ^13.08 ^13.09 ^13.10 ^13.11 ^13.12 ^13.13 ^13.14 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed

parC:Gene Product(s): Difference between revisions

Revision as of 16:35, 16 February 2009

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

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-[[Category:GO:0003677_!_DNA_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003677_!_DNA_binding GO:0003677]
+GO:0003677
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 DNA binding
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-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000004
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 IEA: Inferred from Electronic Annotation
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-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002205 InterPro:IPR002205]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005742 InterPro:IPR005742]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR006691 InterPro:IPR006691]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013757 InterPro:IPR013757]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013758 InterPro:IPR013758]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013760 InterPro:IPR013760]<br />[http://www.uniprot.org/keywords/KW-0238 SP_KW:KW-0238]
+InterPro:IPR002205<br />InterPro:IPR005742<br />InterPro:IPR006691<br />InterPro:IPR013757<br />InterPro:IPR013758<br />InterPro:IPR013760<br />SP_KW:KW-0238
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-[[Category:GO:0003916_!_DNA_topoisomerase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003916_!_DNA_topoisomerase_activity GO:0003916]
+GO:0003916
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 DNA topoisomerase activity
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-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000002<br />GO_REF:0000004
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 IEA: Inferred from Electronic Annotation
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-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR006691 InterPro:IPR006691]<br />[http://www.uniprot.org/keywords/KW-0799 SP_KW:KW-0799]
+InterPro:IPR006691<br />SP_KW:KW-0799
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 F
@@ Line 121: / Line 121: @@
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-[[Category:GO:0003918_!_DNA_topoisomerase_(ATP-hydrolyzing)_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003918_!_DNA_topoisomerase_(ATP-hydrolyzing)_activity GO:0003918]
+GO:0003918
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 DNA topoisomerase (ATP-hydrolyzing) activity
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-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]
+GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002
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 IEA: Inferred from Electronic Annotation
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-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002205 InterPro:IPR002205]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005742 InterPro:IPR005742]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013757 InterPro:IPR013757]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013758 InterPro:IPR013758]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013760 InterPro:IPR013760]
+InterPro:IPR002205<br />InterPro:IPR005742<br />InterPro:IPR013757<br />InterPro:IPR013758<br />InterPro:IPR013760
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 F
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-[[Category:GO:0005524_!_ATP_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005524_!_ATP_binding GO:0005524]
+GO:0005524
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 ATP binding
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-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]
+GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002205 InterPro:IPR002205]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005742 InterPro:IPR005742]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR006691 InterPro:IPR006691]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013757 InterPro:IPR013757]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013758 InterPro:IPR013758]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013760 InterPro:IPR013760]
+InterPro:IPR002205<br />InterPro:IPR005742<br />InterPro:IPR006691<br />InterPro:IPR013757<br />InterPro:IPR013758<br />InterPro:IPR013760
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 F
@@ Line 159: / Line 159: @@
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-[[Category:GO:0005694_!_chromosome]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005694_!_chromosome GO:0005694]
+GO:0005694
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 chromosome
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-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]
+GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002205 InterPro:IPR002205]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005742 InterPro:IPR005742]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR006691 InterPro:IPR006691]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013757 InterPro:IPR013757]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013758 InterPro:IPR013758]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013760 InterPro:IPR013760]
+InterPro:IPR002205<br />InterPro:IPR005742<br />InterPro:IPR006691<br />InterPro:IPR013757<br />InterPro:IPR013758<br />InterPro:IPR013760
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 C
@@ Line 178: / Line 178: @@
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-[[Category:GO:0006265_!_DNA_topological_change]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006265_!_DNA_topological_change GO:0006265]
+GO:0006265
 |
 DNA topological change
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]
+GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002205 InterPro:IPR002205]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005742 InterPro:IPR005742]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR006691 InterPro:IPR006691]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013757 InterPro:IPR013757]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013758 InterPro:IPR013758]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR013760 InterPro:IPR013760]
+InterPro:IPR002205<br />InterPro:IPR005742<br />InterPro:IPR006691<br />InterPro:IPR013757<br />InterPro:IPR013758<br />InterPro:IPR013760
 |
 P
@@ Line 197: / Line 197: @@
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-[[Category:GO:0006268_!_DNA_unwinding_during_replication]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006268_!_DNA_unwinding_during_replication GO:0006268]
+GO:0006268
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 DNA unwinding during replication
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]
+GO_REF:0000002<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR005742 InterPro:IPR005742]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR006691 InterPro:IPR006691]
+InterPro:IPR005742<br />InterPro:IPR006691
 |
 P
@@ Line 216: / Line 216: @@
 |
-[[Category:GO:0016020_!_membrane]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016020_!_membrane GO:0016020]
+GO:0016020
 |
 membrane
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0472 SP_KW:KW-0472]
+SP_KW:KW-0472
 |
 C
@@ Line 235: / Line 235: @@
 |
-[[Category:GO:0016853_!_isomerase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016853_!_isomerase_activity GO:0016853]
+GO:0016853
 |
 isomerase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0413 SP_KW:KW-0413]
+SP_KW:KW-0413
 |
 F
@@ Line 254: / Line 254: @@
 |
-[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
+GO:0005737
 |
 cytoplasm
-|[[PMID:12535532]]<ref name=PMID:12535532/>
+|
+PMID:12535532
 |
 IDA: Inferred from Direct Assay
@@ Line 272: / Line 273: @@
 |
-[[Category:GO:0006261_!_DNA-dependent_DNA_replication]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006261_!_DNA-dependent_DNA_replication GO:0006261]
+GO:0006261
 |
 DNA-dependent DNA replication
-|[[PMID:2170028]]<ref name=PMID:2170028/>
+|
+PMID:2170028
 |
 IDA: Inferred from Direct Assay
@@ Line 290: / Line 292: @@
 |
-[[Category:GO:0003918_!_DNA_topoisomerase_(ATP-hydrolyzing)_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003918_!_DNA_topoisomerase_(ATP-hydrolyzing)_activity GO:0003918]
+GO:0003918
 |
 DNA topoisomerase (ATP-hydrolyzing) activity
@@ Line 309: / Line 311: @@
 |
-[[Category:GO:0007059_!_chromosome_segregation]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0007059_!_chromosome_segregation GO:0007059]
+GO:0007059
 |
 chromosome segregation
-|[[PMID:2842295]]<ref name=PMID:2842295/>
+|
+PMID:2842295
 |
 IMP: Inferred from Mutant Phenotype
@@ Line 327: / Line 330: @@
 Contributes to
 |
-[[Category:GO:0003916_!_DNA_topoisomerase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003916_!_DNA_topoisomerase_activity GO:0003916]
+GO:0003916
 |
 DNA topoisomerase activity
-|[[PMID:1334483]]<ref name=PMID:1334483/>
+|
+PMID:1334483
 |
 IDA: Inferred from Direct Assay
@@ Line 345: / Line 349: @@
 |
-[[Category:GO:0019897_!_extrinsic_to_plasma_membrane]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0019897_!_extrinsic_to_plasma_membrane GO:0019897]
+GO:0019897
 |
 extrinsic to plasma membrane
-|[[PMID:1334483]]<ref name=PMID:1334483/>
+|
+PMID:1334483
 |
 IDA: Inferred from Direct Assay
@@ Line 363: / Line 368: @@
 |
-[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
+GO:0005737
 |
 cytoplasm
-|[[PMID:1334483]]<ref name=PMID:1334483/>
+|
+PMID:1334483
 |
 IDA: Inferred from Direct Assay
@@ Line 381: / Line 387: @@
 Contributes to
 |
-[[Category:GO:0003918_!_DNA_topoisomerase_(ATP-hydrolyzing)_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003918_!_DNA_topoisomerase_(ATP-hydrolyzing)_activity GO:0003918]
+GO:0003918
 |
 DNA topoisomerase (ATP-hydrolyzing) activity
-|[[PMID:8227000]]<ref name=PMID:8227000/>
+|
+PMID:8227000
 |
 IDA: Inferred from Direct Assay
@@ Line 399: / Line 406: @@
 |
-[[Category:GO:0009330_!_DNA_topoisomerase_complex_(ATP-hydrolyzing)]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0009330_!_DNA_topoisomerase_complex_(ATP-hydrolyzing) GO:0009330]
+GO:0009330
 |
 DNA topoisomerase complex (ATP-hydrolyzing)
-|[[PMID:8227000]]<ref name=PMID:8227000/>
+|
+PMID:8227000
 |
 IDA: Inferred from Direct Assay
@@ Line 417: / Line 425: @@
 |
-[[Category:GO:0006265_!_DNA_topological_change]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006265_!_DNA_topological_change GO:0006265]
+GO:0006265
 |
 DNA topological change
-|[[PMID:8227000]]<ref name=PMID:8227000/>
+|
+PMID:8227000
 |
 IDA: Inferred from Direct Assay
@@ Line 435: / Line 444: @@
 |
-[[Category:GO:0003677_!_DNA_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0003677_!_DNA_binding GO:0003677]
+GO:0003677
 |
 DNA binding
-|[[PMID:18023670]]<ref name=PMID:18023670/>
+|
+PMID:18023670
 |
 IDA: Inferred from Direct Assay
@@ Line 453: / Line 463: @@
 |
-[[Category:GO:0030541_!_plasmid_partitioning]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0030541_!_plasmid_partitioning GO:0030541]
+GO:0030541
 |
 plasmid partitioning
-|[[PMID:8104339]]<ref name=PMID:8104339/>
+|
+PMID:8104339
 |

parC:Gene Product(s): Difference between revisions

Revision as of 16:35, 16 February 2009

Nomenclature

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Function

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Localization

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Structure and Physical Properties

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Gene Product Resources

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