hupB:Gene: Difference between revisions

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|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
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*  
*  
****************************************************************************************** -->{{Gene_nomenclature_help}}
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|-
|-
!align=left {{table_heading_style}} |Standard name
!align=left {{table_heading_style}} |Standard name
||
||
''hupB''  
''hupB''
|-
|-
!align=left {{table_heading_style}} |Mnemonic
!align=left {{table_heading_style}} |Mnemonic
||
||
 
HU protein
|-
|-
!align=left {{table_heading_style}} |Synonyms
!align=left {{table_heading_style}} |Synonyms
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''ECK0434, b0440, JW0430, dpeA, hopD, dbhB, gsp*''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK0434, b0440, JW0430, dpeA, hopD, dbhB, gsp*''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>


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*  
*  
****************************************************************************************** -->{{Gene_location_help}}
****************************************************************************************** -->{{Gene_location_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="F46a9b088d47a5"  class=" tableEdit Gene_location_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
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9.93 minutes&nbsp;
9.93 minutes&nbsp;
|
|
MG1655: 460675..460947<br />{{GBrowseFigureByCoord|459675|461947|ecoli|MG1655}}
MG1655: 460675..460947<br /><gbrowseImage>
name=NC_000913:460675..460947
source=MG1655
preset=GeneLocation
</gbrowseImage>
 
|
|
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG10467 EcoCyc]
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG10467 EcoCyc]
{{GBrowseLink|ecoli|NC_000913|459675|461947|GBrowse(MG1655)}}
{{GBrowseLink|MG1655|NC_000913|459675|461947|GBrowse(MG1655)}}
   
   
|
|
{{GBrowseFastaLink|ecoli|NC_000913|460675|460947|FASTA Dump}}
{{GBrowseFastaLink|MG1655|NC_000913|460675|460947|FASTA Dump}}
*[http://biocyc.org/ECOLI/sequence?object=EG10467 EcoCyc Sequence Dump]  
*[http://biocyc.org/ECOLI/sequence?object=EG10467 EcoCyc Sequence Dump]  
|-
|
[[REL606]]
|
|
NC_012967: 433506..433778<br /><gbrowseImage>
name=NC_012967:433506..433778
source=REL606
preset=GeneLocation
</gbrowseImage>
|
{{GBrowseLink|REL606|NC_012967|433506|433778|GBrowse (REL606)}}
|
{{GBrowseFastaLink|REL606|NC_012967|433506|433778|FASTA Dump}}
|-
|
[[BW2952]]
|
|
NC_012759: 363434..363706<br /><gbrowseImage>
name=NC_012759:363434..363706
source=BW2952
preset=GeneLocation
</gbrowseImage>
|
{{GBrowseLink|BW2952|NC_012759|363434|363706|GBrowse (BW2952)}}
|
{{GBrowseFastaLink|BW2952|NC_012759|363434|363706|FASTA Dump}}
|-  
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&nbsp;
&nbsp;
|
|
W3110: 460675..460947<br />{{GBrowseFigureByCoord|459675|461947|ecoli_W3110|W3110}}
W3110: 460675..460947<br /><gbrowseImage>
name=NC_007779:460675..460947
source=W3110
preset=GeneLocation
</gbrowseImage>
 
|
|
{{GBrowseLink|ecoli_W3110|AC_000091|459675|461947|GBrowse(W3110)}}  
{{GBrowseLink|W3110|NC_007779|459675|461947|GBrowse(W3110)}}  
|
|
{{GBrowseFastaLink|ecoli_W3110|AC_000091|460675|460947|FASTA Dump}}  
{{GBrowseFastaLink|W3110|NC_007779|460675|460947|FASTA Dump}}
|-
|
[[DH10B]]
|
 
|
DH10B: 400006..400278<br /><gbrowseImage>
name=NC_010473:400006..400278
source=DH10B
preset=GeneLocation
</gbrowseImage>
 
|
{{GBrowseLink|DH10B|NC_010473|399462|400822|GBrowse(DH10B)}}
|
{{GBrowseFastaLink|DH10B|NC_010473|399462|400822|FASTA Dump}}  


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*  
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****************************************************************************************** -->{{Gene_sequence_features_help}}
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{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="B46a9b089be316"  class=" tableEdit Gene_sequence_features_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Feature type!!Location!!Description
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
|-
|
Coding Start (SO:0000323)
|
[[MG1655]]
|
460675
|
Edman degradation
|
PMID:215461<br />PMID:350619<br />PMID:6987059<br />PMID:9298646<br />
|


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*  
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****************************************************************************************** -->{{Gene_alleles_help}}
****************************************************************************************** -->{{Gene_alleles_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="H46a9b08a389e4"  class=" tableEdit Gene_allele_table dataTable" 
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
|-  
|-  
|
|
&Delta;hupB (Keio:JW0430)
hupBA30D
|
 
|
A30D
|
 
|
No effect
|
 
|
 
|
seeded from [http://www.uniprot.org/uniprot/P0ACF4 UniProt:P0ACF4]
|-
|
hupBRTGR58GTGG
|
 
|
RTGR58GTGG
|
 
|
Reduced DNA-binding
|
 
|
 
|
seeded from [http://www.uniprot.org/uniprot/P0ACF4 UniProt:P0ACF4]
|-
|
hupBF47T
|
 
|
F47T
|
 
|
Reduced DNA-binding
|
 
|
 
|
seeded from [http://www.uniprot.org/uniprot/P0ACF4 UniProt:P0ACF4]
|-
|
hupBK37Q
|
 
|
K37Q
|
 
|
No effect
|
 
|
 
|
seeded from [http://www.uniprot.org/uniprot/P0ACF4 UniProt:P0ACF4]
|-
|
''hupB(del)'' (Keio:JW0430)
|
|
deletion
deletion
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|
|


|[[PMID:16738554]]<ref name=PMID:16738554/>
|
|
[http://www.shigen.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do Shigen]<br>[http://cgsc2.biology.yale.edu/Strain.php?ID=106874 CGSC8593]<ref name='LIB:cgsc'/>  
PMID:16738554
|
[http://www.shigen.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do Shigen]
 
[http://cgsc2.biology.yale.edu/Strain.php?ID=106874 CGSC8593]<ref name='LIB:cgsc'/>  
|
|
   
   
|-  
|-  
|
|
''&#916;hupB726::kan''
[http://asap.ahabs.wisc.edu/asap/feature_info.php?FeatureID=ABE-0001527 hupB::Tn5KAN-2] (FB20176)
|
Insertion at nt 210 in Minus orientation
|
|


Line 162: Line 308:
|
|


|
PMID:15262929
|
[http://www.genome.wisc.edu/resources/forms/strainrequest.htm E. coli Genome Project:FB20176]
|
does not contain [[pKD46]]
|-
|
''hupB(del)''::kan
|
deletion
|
|


|[[PMID:16738554]]<ref name=PMID:16738554/>
|
[[Biolog]]:respiration
|
unable to respire [[Carbon sources|a-Ketobutyrate]]
|
PMID:16095938
|
 
|
|-
|
''hupB726(del)::kan''
|
 
|
 
|
 
|
 
|
PMID:16738554
|
|
[[cgscmutation:101442|CGSC:101442]]
[[cgscmutation:101442|CGSC:101442]]
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===Notes===
===Notes===


==Genetic Interactions==
{{BacktoTop}}
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.11445.H4e04bd51a9839-->
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="H4e04bd51a9839"  class=" tableEdit Genetic_interaction_table dataTable" 
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!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
|- class="tableEdit_footer"
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===Notes===


==Genetic Resources==
==Genetic Resources==
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|- {{table_heading_style}}
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!|Resource!!Resource Type!!Source!!Notes/Reference
!|Resource!!Resource Type!!Source!!Notes/Reference
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|
|
[http://www.shigen.nig.ac.jp/ecoli/strain/askaCloneQueryAction.do?strainTypeId=9 Shigen]
[http://www.shigen.nig.ac.jp/ecoli/strain/askaCloneQueryAction.do?strainTypeId=9 Shigen]
|[[PMID:16769691]]<ref name=PMID:16769691/>
|
PMID:16769691


Status:Clone OK
Status:Clone OK
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Primer 2:CCGTTTACCGCGTCTTTCAGTGC  
Primer 2:CCGTTTACCGCGTCTTTCAGTGC  
|-
|
[[:Category:Kohara_Phage:3B6|3B6]]
|
Kohara Phage
|
[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=148 Genobase]
|
PMID:3038334
|-
|
[[:Category:Kohara_Phage:7E2|7E2]]
|
Kohara Phage
|
[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=149 Genobase]
|
PMID:3038334
|-  
|-  
|
|
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CAG12017 = [http://cgsc2.biology.yale.edu/Strain.php?ID=39373 CGSC7339]<ref name='LIB:cgsc'/>
CAG12017 = [http://cgsc2.biology.yale.edu/Strain.php?ID=39373 CGSC7339]<ref name='LIB:cgsc'/>
|
|
est. P1 cotransduction: 96% <ref name='LIB:Nichols_linked_Tn'/>nnSynonyms:zba-3054::Tn10  
est. P1 cotransduction: 96% <ref name='LIB:Nichols_linked_Tn'/> <br />
Synonyms:zba-3054::Tn10  
|-  
|-  
|
|
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CAG12154 = [http://cgsc2.biology.yale.edu/Strain.php?ID=39379 CGSC7341]<ref name='LIB:cgsc'/>
CAG12154 = [http://cgsc2.biology.yale.edu/Strain.php?ID=39379 CGSC7341]<ref name='LIB:cgsc'/>
|
|
est. P1 cotransduction: 18% <ref name='LIB:Nichols_linked_Tn'/>nnSynonyms:zbb-30-55::TnlO, zba-3055::Tn10  
est. P1 cotransduction: 18% <ref name='LIB:Nichols_linked_Tn'/> <br />
Synonyms:zbb-30-55::TnlO, zba-3055::Tn10  


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{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Q46a9b08c0bcf7"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-  
|-  
|
|
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
[[EcoCyc]]
|
|
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10467 EcoCyc:EG10467]
EcoCyc:EG10467
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://www.ecoli-york.org EchoBASE] ([[EchoBASE|EcoliWiki Page]])
[[EcoGene]]
|
|
[http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0462 EchoBASE:EB0462]
EcoGene:EG10467
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://chase.ou.edu/oubcf/index.php EcoliGenExpDB] ([[EcoliGenExpDB|EcoliWiki Page]])
[[RegulonDB]]
|
|
[http://chase.ou.edu/macro/searchlink.php?bnum=b0440 EcoliGenExpDB:b0440]
RegulonDB:ECK120000460
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://BioCyc.org/ECOL199310/ ECOL199310CYC] ([[ECOL199310CYC|EcoliWiki Page]])  
[http://www.ncbi.nlm.nih.gov/gene NCBI] ([[NCBI|EcoliWiki Page]])
|
|
[http://BioCyc.org/ECOL199310/new-image?object=C0556 ECOL199310CYC:C0556]
[http://www.ncbi.nlm.nih.gov/gene?term=949095 GeneID:949095]
|
|
Escherichia coli str. K-12 substr. MG1655
|-  
|-  
|
|
[http://ecogene.org EcoGene] ([[EcoGene|EcoliWiki Page]])
[[EchoBASE]]
|
|
[http://ecogene.org/geneinfo.php?eg_id=EG10467 EcoGene:EG10467]
EchoBASE:EB0462
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://BioCyc.org/ECOO157/ ECOO157CYC] ([[ECOO157CYC|EcoliWiki Page]])
[[ASAP]]
|
|
[http://BioCyc.org/ECOO157/new-image?object=HUPB ECOO157CYC:HUPB]
ASAP:ABE-0001527
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]  
|-  
|
[http://cgsc.biology.yale.edu CGSC] ([[CGSC|EcoliWiki Page]])
|
[http://cgsc.biology.yale.edu/cgi-bin/sybgw/cgsc/Site/18235 CGSC:18235]
|
|-
|
[https://asap.ahabs.wisc.edu/asap/logon.php ASAP] ([[ASAP|EcoliWikiPage]])
|
[http://asap.ahabs.wisc.edu/asap/feature_info.php?LocationID=WIS&FeatureID=0001527&formSubmitReturn=1 ASAP:ABE-0001527]
|


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==References==
==References==
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===Categories===
===Categories===
[[Category:Gene List:MG1655]]
[[Category:Gene List:MG1655]]
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[[Category:Genes in the Keio knockout collection]]
[[Category:Genes in the Keio knockout collection]]
[[Category:Genes in the ASKA clone collection]]
[[Category:Genes in the ASKA clone collection]]
[[Category:hup genes]]
[[Category:hup genes]][[Category:Gene_List:DH10B]][[Category:Gene_List:REL606]]
[[Category:Gene_List:BW2952]]

Latest revision as of 20:30, 19 September 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

hupB

Mnemonic

HU protein

Synonyms

ECK0434, b0440, JW0430, dpeA, hopD, dbhB, gsp*[1][2]

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Notes

Location(s) and DNA Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

9.93 minutes 

MG1655: 460675..460947
<gbrowseImage> name=NC_000913:460675..460947 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 433506..433778
<gbrowseImage> name=NC_012967:433506..433778 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 363434..363706
<gbrowseImage> name=NC_012759:363434..363706 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 460675..460947
<gbrowseImage> name=NC_007779:460675..460947 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 400006..400278
<gbrowseImage> name=NC_010473:400006..400278 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

Coding Start (SO:0000323)

MG1655

460675

Edman degradation

PMID:215461[3]
PMID:350619[4]
PMID:6987059[5]
PMID:9298646[6]


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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

hupBA30D

A30D

No effect

seeded from UniProt:P0ACF4

hupBRTGR58GTGG

RTGR58GTGG

Reduced DNA-binding

seeded from UniProt:P0ACF4

hupBF47T

F47T

Reduced DNA-binding

seeded from UniProt:P0ACF4

hupBK37Q

K37Q

No effect

seeded from UniProt:P0ACF4

hupB(del) (Keio:JW0430)

deletion

deletion

PMID:16738554[7]

Shigen

CGSC8593[8]

hupB::Tn5KAN-2 (FB20176)

Insertion at nt 210 in Minus orientation

PMID:15262929[9]

E. coli Genome Project:FB20176

does not contain pKD46

hupB(del)::kan

deletion

Biolog:respiration

unable to respire a-Ketobutyrate

PMID:16095938[10]

hupB726(del)::kan

PMID:16738554[7]

CGSC:101442


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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW0430

Plasmid clone

Shigen

PMID:16769691[11]

Status:Clone OK

Primer 1:GCCAATAAATCTCAATTGATCGA

Primer 2:CCGTTTACCGCGTCTTTCAGTGC

3B6

Kohara Phage

Genobase

PMID:3038334[12]

7E2

Kohara Phage

Genobase

PMID:3038334[12]

zaj-3054::Tn10

Linked marker

CAG12017 = CGSC7339[8]

est. P1 cotransduction: 96% [13]
Synonyms:zba-3054::Tn10

gsk-3055::Tn10

Linked marker

CAG12154 = CGSC7341[8]

est. P1 cotransduction: 18% [13]
Synonyms:zbb-30-55::TnlO, zba-3055::Tn10

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10467

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10467

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000460

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:949095

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0462

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001527

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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<protect>

References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ Mende, L et al. (1978) Primary structures of two homologous ribosome-associated DNA-binding proteins of Escherichia coli. FEBS Lett. 96 395-8 PubMed
  4. ↑ Laine, B et al. (1978) The amino- and carboxy-terminal amino acid sequences of protein HU from Escherichia coli. FEBS Lett. 89 116-20 PubMed
  5. ↑ Laine, B et al. (1980) Complete amino-acid sequences of DNA-binding proteins HU-1 and HU-2 from Escherichia coli. Eur. J. Biochem. 103 447-61 PubMed
  6. ↑ Link, AJ et al. (1997) Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12. Electrophoresis 18 1259-313 PubMed
  7. ↑ 7.0 7.1 Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed
  8. ↑ 8.0 8.1 8.2 CGSC: The Coli Genetics Stock Center
  9. ↑ Kang, Y et al. (2004) Systematic mutagenesis of the Escherichia coli genome. J. Bacteriol. 186 4921-30 PubMed
  10. ↑ Ito, M et al. (2005) Functional analysis of 1440 Escherichia coli genes using the combination of knock-out library and phenotype microarrays. Metab. Eng. 7 318-27 PubMed
  11. ↑ Kitagawa, M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12 291-9 PubMed
  12. ↑ 12.0 12.1 Kohara, Y et al. (1987) The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell 50 495-508 PubMed
  13. ↑ 13.0 13.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

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