selB:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

selB

Gene Synonym(s)

ECK3579, b3590, JW3563, fdhA[1], fdhA

Product Desc.

selenocysteinyl-tRNA-specific translation factor[2][3]

Elongation factor promoting selenocysteine incorporation; specific for selenocysteyl tRNA[4]

Product Synonyms(s)

selenocysteinyl-tRNA-specific translation factor[1], B3590[2][1], FdhA[2][1], SelB[2][1] , ECK3579, fdhA, JW3563, b3590

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): selAB[2]

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

selB

Mnemonic

Selenium

Synonyms

ECK3579, b3590, JW3563, fdhA[1], fdhA

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

80.95 minutes 

MG1655: 3757884..3756040
<gbrowseImage> name=NC_000913:3756040..3757884 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 3694554..3692710
<gbrowseImage> name=NC_012967:3692710..3694554 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 3644366..3646210
<gbrowseImage> name=NC_012759:3644366..3646210 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 3880554..3882398
<gbrowseImage> name=NC_007779:3880554..3882398 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 3855461..3853617
<gbrowseImage> name=NC_010473:3853617..3855461 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

Coding Start (SO:0000323)

MG1655

3756040

Edman degradation

PMID:2140572


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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

ΔselB (Keio:JW3563)

deletion

deletion

PMID:16738554

Shigen
CGSC10627[5]

ΔselB300::kan

CGSC:44357

ΔselB774::kan

PMID:16738554

CGSC:102908


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Notes

Genetic Interactions

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<protect>

Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW3563

Plasmid clone

Shigen

PMID:16769691

Status:Clone OK

Primer 1:GCCATTATTGCGACTGCCGGACA

Primer 2:CCTTTTTCCGGAAATAATAATGC

2C10

Kohara Phage

Genobase

PMID:3038334

9B3

Kohara Phage

Genobase

PMID:3038334

zhg-50::Tn10

Linked marker

CAG18450 = CGSC7450[5]

est. P1 cotransduction: % [6]
Synonyms:zhf-50::Tn10, zhf-5::Tn10

zic-4901::Tn10

Linked marker

CAG18492 = CGSC7457[5]

est. P1 cotransduction: 1% [6]

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10942

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10942

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000931

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:948103

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0935

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011729

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

SelB

Synonyms

selenocysteinyl-tRNA-specific translation factor[1], B3590[2][1], FdhA[2][1], SelB[2][1] , ECK3579, fdhA, JW3563, b3590

Product description

selenocysteinyl-tRNA-specific translation factor[2][3]

Elongation factor promoting selenocysteine incorporation; specific for selenocysteyl tRNA[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

GO:0000166

nucleotide binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

Seeded from EcoCyc (v14.0)

complete

GO:0001514

selenocysteine incorporation

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004535

P

Seeded from EcoCyc (v14.0)

complete

GO:0001514

selenocysteine incorporation

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015190

P

Seeded from EcoCyc (v14.0)

complete

GO:0001514

selenocysteine incorporation

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015191

P

Seeded from EcoCyc (v14.0)

complete

GO:0003723

RNA binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004535

F

Seeded from EcoCyc (v14.0)

complete

GO:0003723

RNA binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015190

F

Seeded from EcoCyc (v14.0)

complete

GO:0003723

RNA binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015191

F

Seeded from EcoCyc (v14.0)

complete

GO:0003746

translation elongation factor activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004535

F

Seeded from EcoCyc (v14.0)

complete

GO:0003746

translation elongation factor activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015190

F

Seeded from EcoCyc (v14.0)

complete

GO:0003746

translation elongation factor activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015191

F

Seeded from EcoCyc (v14.0)

complete

GO:0003924

GTPase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000795

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000795

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004161

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004535

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015190

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015191

F

Seeded from EcoCyc (v14.0)

complete

GO:0005525

GTP binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0342

F

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004535

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015190

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015191

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0963

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0086

C

Seeded from EcoCyc (v14.0)

complete

GO:0006412

translation

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0648

P

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

rpsI

PMID:16606699

Experiment(s):EBI-1146180

Protein

rplB

PMID:16606699

Experiment(s):EBI-1146180

Protein

ompL

PMID:16606699

Experiment(s):EBI-1146180

Protein

rplQ

PMID:16606699

Experiment(s):EBI-1146180

Protein

aceE

PMID:15690043

Experiment(s):EBI-883733

Protein

aceF

PMID:15690043

Experiment(s):EBI-883733

Protein

dnaJ

PMID:15690043

Experiment(s):EBI-883733, EBI-890918

Protein

pta

PMID:15690043

Experiment(s):EBI-883733

Protein

rplB

PMID:15690043

Experiment(s):EBI-883733

Protein

rplC

PMID:15690043

Experiment(s):EBI-883733, EBI-890918

Protein

rpsD

PMID:15690043

Experiment(s):EBI-883733, EBI-890918

Protein

srmB

PMID:15690043

Experiment(s):EBI-883733, EBI-890918

Protein

rnr

PMID:15690043

Experiment(s):EBI-883733

Protein

rluB

PMID:15690043

Experiment(s):EBI-883733

Protein

yfiF

PMID:15690043

Experiment(s):EBI-883733, EBI-890918

Protein

rho

PMID:15690043

Experiment(s):EBI-890918

Protein

rplA

PMID:15690043

Experiment(s):EBI-890918

Protein

rplD

PMID:15690043

Experiment(s):EBI-890918

Protein

rplI

PMID:15690043

Experiment(s):EBI-890918

Protein

rplL

PMID:15690043

Experiment(s):EBI-890918

Protein

rplO

PMID:15690043

Experiment(s):EBI-890918

Protein

rplS

PMID:15690043

Experiment(s):EBI-890918

Protein

rplT

PMID:15690043

Experiment(s):EBI-890918

Protein

rplU

PMID:15690043

Experiment(s):EBI-890918

Protein

rplV

PMID:15690043

Experiment(s):EBI-890918

Protein

rplX

PMID:15690043

Experiment(s):EBI-890918

Protein

rplY

PMID:15690043

Experiment(s):EBI-890918

Protein

rpmB

PMID:15690043

Experiment(s):EBI-890918

Protein

rpsA

PMID:15690043

Experiment(s):EBI-890918

Protein

rpsC

PMID:15690043

Experiment(s):EBI-890918

Protein

rpsE

PMID:15690043

Experiment(s):EBI-890918

Protein

rpsF

PMID:15690043

Experiment(s):EBI-890918

Protein

rpsG

PMID:15690043

Experiment(s):EBI-890918

Protein

rpsT

PMID:15690043

Experiment(s):EBI-890918

Protein

rplM

PMID:15690043

Experiment(s):EBI-890918

Protein

rplY

PMID:19402753

LCMS(ID Probability):99.6

Protein

rplO

PMID:19402753

LCMS(ID Probability):99.6

Protein

rpsA

PMID:19402753

LCMS(ID Probability):99.6 MALDI(Z-score):2.220191

Protein

rho

PMID:19402753

LCMS(ID Probability):99.6

Protein

rplU

PMID:19402753

LCMS(ID Probability):99.6

Protein

rplM

PMID:19402753

LCMS(ID Probability):99.6

Protein

pta

PMID:19402753

MALDI(Z-score):25.744061

Protein

rplT

PMID:19402753

LCMS(ID Probability):99.6

Protein

rplS

PMID:19402753

LCMS(ID Probability):99.6

Protein

rpsF

PMID:19402753

LCMS(ID Probability):99.6

Protein

rplI

PMID:19402753

LCMS(ID Probability):99.4

Protein

rpsD

PMID:19402753

LCMS(ID Probability):99.6 MALDI(Z-score):34.734394

Protein

srmB

PMID:19402753

LCMS(ID Probability):99.6 MALDI(Z-score):15.619374

Protein

rplB

PMID:19402753

LCMS(ID Probability):94.6 MALDI(Z-score):31.166264

Protein

rpsC

PMID:19402753

LCMS(ID Probability):99.6

Protein

rplX

PMID:19402753

LCMS(ID Probability):99.6

Protein

dnaJ

PMID:19402753

LCMS(ID Probability):99.6 MALDI(Z-score):23.491939

Protein

rplA

PMID:19402753

LCMS(ID Probability):99.6

Protein

rplD

PMID:19402753

LCMS(ID Probability):99.6 MALDI(Z-score):2.210716

Protein

yfiF

PMID:19402753

LCMS(ID Probability):99.6 MALDI(Z-score):32.454436

Protein

rnr

PMID:19402753

MALDI(Z-score):27.609239

Protein

rluB

PMID:19402753

MALDI(Z-score):26.510533

Protein

rplL

PMID:19402753

LCMS(ID Probability):99.6

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MIIATAGHVD HGKTTLLQAI TGVNADRLPE EKKRGMTIDL GYAYWPQPDG RVPGFIDVPG
HEKFLSNMLA GVGGIDHALL VVACDDGVMA QTREHLAILQ LTGNPMLTVA LTKADRVDEA
RVDEVERQVK EVLREYGFAE AKLFITAATE GRGMDALREH LLQLPEREHA SQHSFRLAID
RAFTVKGAGL VVTGTALSGE VKVGDSLWLT GVNKPMRVRA LHAQNQPTET ANAGQRIALN
IAGDAEKEQI NRGDWLLADV PPEPFTRVIV ELQTHTPLTQ WQPLHIHHAA SHVTGRVSLL
EDNLAELVFD TPLWLADNDR LVLRDISARN TLAGARVVML NPPRRGKRKP EYLQWLASLA
RAQSDADALS VHLERGAVNL ADFAWARQLN GEGMRELLQQ PGYIQAGYSL LNAPVAARWQ
RKILDTLATY HEQHRDEPGP GRERLRRMAL PMEDEALVLL LIEKMRESGD IHSHHGWLHL
PDHKAGFSEE QQAIWQKAEP LFGDEPWWVR DLAKETGTDE QAMRLTLRQA AQQGIITAIV
KDRYYRNDRI VEFANMIRDL DQECGSTCAA DFRDRLGVGR KLAIQILEYF DRIGFTRRRG
NDHLLRDALL FPEK
Length

614

Mol. Wt

68.868 kDa

pI

6.6 (calculated)

Extinction coefficient

80,900 - 81,275 (calc based on 10 Y, 12 W, and 3 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

1..166

PF00009 Elongation factor Tu GTP binding domain

PMID:19920124

Domain

189..257

PF03144 Elongation factor Tu domain 2

PMID:19920124

Domain

423..480

PF09106 Elongation factor SelB, winged helix

PMID:19920124

Domain

557..606

PF09107 Elongation factor SelB, winged helix

PMID:19920124

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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=selB taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131461

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948103

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011729

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P14081

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10942

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10942

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948103

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000931

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0935

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

Ecoli K-12

7.13+/-0.075

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

Single Molecule Fluorescence

PMID:20671182

mRNA

Ecoli K-12

0.026843818

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

by RNA_Seq

PMID:20671182

Protein

E. coli K-12 MG1655

1083

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

338

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

672

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

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Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

selAB

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Figure courtesy of RegulonDB

</protect>

Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:3757864..3757904 source=MG1655 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

</protect>

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b3590 (EcoliWiki Page)

NCBI GEO profiles for selB

microarray

GenExpDB:b3590 (EcoliWiki Page)

Summary of data for selB from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to selB Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10942

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0935

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b3590

EcoGene

EcoGene:EG10942

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000931

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011729

Escherichia coli str. K-12 substr. MG1655

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<protect></protect>

Notes

Links

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Shigella flexneri

SELB

From SHIGELLACYC

E. coli O157

SELB

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03144 Elongation factor Tu domain 2

Pfam (EcoliWiki Page)

PF00009 Elongation factor Tu GTP binding domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:46785

Superfamily (EcoliWiki Page)

SUPERFAMILY:46785

Superfamily (EcoliWiki Page)

SUPERFAMILY:50447

Superfamily (EcoliWiki Page)

SUPERFAMILY:50465

Panther (EcoliWiki Page)

PTHR23115:SF39

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Pfam (EcoliWiki Page)

PF09106 Elongation factor SelB, winged helix

Pfam (EcoliWiki Page)

PF09107 Elongation factor SelB, winged helix

EcoCyc

EcoCyc:EG10942

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10942

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000931

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0935

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011729

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 CGSC: The Coli Genetics Stock Center
  6. ↑ 6.0 6.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

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