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On One Page

Quickview |

Gene |

Product(s) |

Expression|

Evolution |

References |

Quickview

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<protect> See Help:Quickview for help with entering information in the Quickview table.

Standard Name	insD-6
Gene Synonym(s)	insD, ECK0358, b0361, JW0352, yi22-1, b1402, JW1397, yi22-2, b1996, JW1975, yi22-3, b2860, JW2826, yi22-4, b3045, JW3013, yi22-5, b4273, JW4230, yi22-6, unique to W3110, JW5933, JW5918, JW5903, JW5899, ECK1572, b1578, JW1570, insD-1, insD-2, insD-3, insD-4, insD-5^[1]^[2]^[3]
Product Desc.	IS2 element protein^[3]^[2], Qin prophage; predicted transposase^[3]^[2]
Product Synonyms(s)	InsD-2, IS2 insertion element transposase InsAB'^[1], CP4-44 prophage; IS2 insertion element transposase InsAB'^[1], KpLE2 phage-like element; IS2 insertion element transposase InsAB'^[1], IS2 element protein^[1], Qin prophage; predicted transposase^[1], B3045^[3]^[1], B0361^[3]^[1], B1402^[3]^[1], B1996^[3]^[1], B2860^[3]^[1], B4273^[3]^[1], B1578^[3], InsD-1^[3]^[1], InsD-3^[3]^[1], InsD-4^[3]^[1], InsD-5^[3]^[1], InsD-6^[3]^[1]
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): insCD-1^[3], insCD-2^[3], insCD-3^[3], ygeM^[3], insCD-5^[3], insCD-6^[3], dicB-ydfDE-insD-intD^[3]
Regulation/Activity
Quick Links	PortEco search(insD-6) DNA display Protein display Pubmed(insD-6) Textpresso(insD-6)
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</protect> See Help:Quickview for help with entering information in the Quickview table. <protect></protect>

Notes

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Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name	insD-6
Mnemonic
Synonyms	insD, ECK0358, b0361, JW0352, yi22-1, b1402, JW1397, yi22-2, b1996, JW1975, yi22-3, b2860, JW2826, yi22-4, b3045, JW3013, yi22-5, b4273, JW4230, yi22-6, unique to W3110, JW5933, JW5918, JW5903, JW5899, ECK1572, b1578, JW1570, insD-1, insD-2, insD-3, insD-4, insD-5^[1]^[2]^[3]
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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain	Map location	Genome coordinates	Genome browsers	Sequence links
MG1655	8.21 minutes	MG1655: 380898..381803 <gbrowseImage> name=NC_000913:380898..381803 source=MG1655 preset=GeneLocation </gbrowseImage>	EcoCyc GBrowse(MG1655)	FASTA Dump EcoCyc Sequence Dump
BW2952		NC_012759: 2797242..2798147 <gbrowseImage> name=NC_012759:2797242..2798147 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 3825220..3825585 <gbrowseImage> name=NC_012759:3825220..3825585 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
REL606		NC_012967: 2005753..2006658 <gbrowseImage> name=NC_012967:2005753..2006658 source=REL606 preset=GeneLocation </gbrowseImage>	GBrowse (REL606)	FASTA Dump
BW2952		NC_012759: 3825543..3826448 <gbrowseImage> name=NC_012759:3825543..3826448 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 3432536..3433078 <gbrowseImage> name=NC_012759:3432536..3433078 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 3432172..3432567 <gbrowseImage> name=NC_012759:3432172..3432567 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 1358004..1358909 <gbrowseImage> name=NC_012759:1358004..1358909 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 1959459..1960364 <gbrowseImage> name=NC_012759:1959459..1960364 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 283657..284562 <gbrowseImage> name=NC_012759:283657..284562 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 2881542..2882447 <gbrowseImage> name=NC_012759:2881542..2882447 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 3071680..3072585 <gbrowseImage> name=NC_012759:3071680..3072585 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
BW2952		NC_012759: 4435353..4436258 <gbrowseImage> name=NC_012759:4435353..4436258 source=BW2952 preset=GeneLocation </gbrowseImage>	GBrowse (BW2952)	FASTA Dump
W3110		W3110: 380898..381803 <gbrowseImage> name=NC_007779:380898..381803 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse(W3110)	FASTA Dump
MG1655	31.6 minutes	MG1655: 1466850..1465945 <gbrowseImage> name=NC_000913:1465945..1466850 source=ecoli preset=GeneLocation </gbrowseImage>	EcoCyc GBrowse (MG1655)	FASTA Dump
W3110		W3110: 1470540..1469635 <gbrowseImage> name=NC_007779:1469635..1470540 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
MG1655	44.55 minutes	MG1655: 2067881..2066976 <gbrowseImage> name=NC_000913:2066976..2067881 source=ecoli preset=GeneLocation </gbrowseImage>	EcoCyc GBrowse (MG1655)	FASTA Dump
W3110		W3110: 2071994..2071089 <gbrowseImage> name=NC_007779:2071089..2071994 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
MG1655	64.54 minutes	MG1655: 2995299..2994394 <gbrowseImage> name=NC_000913:2994394..2995299 source=ecoli preset=GeneLocation </gbrowseImage>	EcoCyc GBrowse (MG1655)	FASTA Dump
W3110		W3110: 2995933..2995028 <gbrowseImage> name=NC_007779:2995028..2995933 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
MG1655	68.64 minutes	MG1655: 3184532..3185437 <gbrowseImage> name=NC_000913:3184532..3185437 source=ecoli preset=GeneLocation </gbrowseImage>	EcoCyc GBrowse (MG1655)	FASTA Dump
W3110		W3110: 3185166..3186071 <gbrowseImage> name=NC_007779:3185166..3186071 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
MG1655	96.92 minutes	MG1655: 4496618..4497523 <gbrowseImage> name=NC_000913:4496618..4497523 source=ecoli preset=GeneLocation </gbrowseImage>	EcoCyc GBrowse (MG1655)	FASTA Dump
W3110		W3110: 4503275..4504180 <gbrowseImage> name=NC_007779:4503275..4504180 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
W3110		W3110: 3743867..3742944 <gbrowseImage> name=NC_007779:3742944..3743867 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
W3110		W3110: 2321728..2320805 <gbrowseImage> name=NC_007779:2320805..2321728 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
W3110		W3110: 1301435..1302358 <gbrowseImage> name=NC_007779:1301435..1302358 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
W3110		W3110: 1106556..1105633 <gbrowseImage> name=NC_007779:1105633..1106556 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
MG1655	35.54 minutes	MG1655: 1648905..1649561 <gbrowseImage> name=NC_000913:1648905..1649561 source=ecoli preset=GeneLocation </gbrowseImage>	EcoCyc GBrowse (MG1655)	FASTA Dump
W3110		W3110: 1652595..1653251 <gbrowseImage> name=NC_007779:1652595..1653251 source=W3110 preset=GeneLocation </gbrowseImage>	GBrowse (W3110)	FASTA Dump
DH10B		DH10B: 4598426..4599331 <gbrowseImage> name=NC_010473:4598426..4599331 source=DH10B preset=GeneLocation </gbrowseImage>	GBrowse(DH10B)	FASTA Dump
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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type	Strain	Genomic Location	Evidence	Reference	Notes
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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele	Nt change(s)	AA change(s)	Phenotype: Type	Phenotype: Description	Reference	Availability	Comments
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Notes

Genetic Interactions

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Interactor	Interaction	Allele	Score(s)	Reference(s)	Accessions	Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource	Resource Type	Source	Notes/Reference
	Plasmid clone	Shigen	PMID:16769691 Status: Primer 1: Primer 2:
8F10	Kohara Phage	Genobase	PMID:3038334
1C7	Kohara Phage	Genobase	PMID:3038334
1H7	Kohara Phage	Genobase	PMID:3038334
3D5	Kohara Phage	Genobase	PMID:3038334
1A7	Kohara Phage	Genobase	PMID:3038334
7F12	Kohara Phage	Genobase	PMID:3038334
12E2	Kohara Phage	Genobase	PMID:3038334
7B6	Kohara Phage	Genobase	PMID:3038334
3B12	Kohara Phage	Genobase	PMID:3038334
22A6	Kohara Phage	Genobase	PMID:3038334
5A1	Kohara Phage	Genobase	PMID:3038334
15G6	Kohara Phage	Genobase	PMID:3038334
10D8	Kohara Phage	Genobase	PMID:3038334
6B12	Kohara Phage	Genobase	PMID:3038334
9F9	Kohara Phage	Genobase	PMID:3038334
5E3	Kohara Phage	Genobase	PMID:3038334
2A2	Kohara Phage	Genobase	PMID:3038334
3F11	Kohara Phage	Genobase	PMID:3038334
E4D8	Kohara Phage	Genobase	PMID:3038334
zjf-920::Tn10	Linked marker	CAG12019 = CGSC7484^[4]	est. P1 cotransduction: 9% ^[5] Synonyms:zjh-901::Tn10, zjg-920::Tn10
mdoB202::Tn10	Linked marker	CAG18430 = CGSC7488^[4]	est. P1 cotransduction: % ^[5] Synonyms:zjj-202::Tn10, zji-202::Tn10
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc (EcoliWiki Page)	ECOCYC:G6213	Escherichia coli str. K-12 substr. MG1655
EcoGene (EcoliWiki Page)	EcoGene:EG40004	Escherichia coli str. K-12 substr. MG1655
NCBI (EcoliWiki Page)	GeneID:945203	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G6723	Escherichia coli str. K-12 substr. MG1655
NCBI (EcoliWiki Page)	GeneID:945952	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G6836	Escherichia coli str. K-12 substr. MG1655
NCBI (EcoliWiki Page)	GeneID:946118	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G7076	Escherichia coli str. K-12 substr. MG1655
NCBI (EcoliWiki Page)	GeneID:946403	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G7480	Escherichia coli str. K-12 substr. MG1655
NCBI (EcoliWiki Page)	GeneID:947346	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G7584	Escherichia coli str. K-12 substr. MG1655
NCBI (EcoliWiki Page)	GeneID:947517	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G7895	Escherichia coli str. K-12 substr. MG1655
NCBI (EcoliWiki Page)	GeneID:948779	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name	InsD
Synonyms	InsD-2, IS2 insertion element transposase InsAB'^[1], CP4-44 prophage; IS2 insertion element transposase InsAB'^[1], KpLE2 phage-like element; IS2 insertion element transposase InsAB'^[1], IS2 element protein^[1], Qin prophage; predicted transposase^[1], B3045^[3]^[1], B0361^[3]^[1], B1402^[3]^[1], B1996^[3]^[1], B2860^[3]^[1], B4273^[3]^[1], B1578^[3], InsD-1^[3]^[1], InsD-3^[3]^[1], InsD-4^[3]^[1], InsD-5^[3]^[1], InsD-6^[3]^[1] , ECK0358, b0361, b1402, b1578, b1996, b2860, b3045, b4273
Product description	IS2 element protein^[3]^[2], Qin prophage; predicted transposase^[3]^[2]
EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology

See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Reference/Source	Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	at EcoCyc MDSARALIAR GWGVSLVSRC LRVSRAQLHV ILRRTDDWMD GRRSRHTDDT DVLLRIHHVI GELPTYGYRR VWALLRRQAE LDGMPAINAK RVYRIMRQNA LLLERKPAVP PSKRAHTGRV AVKESNQRWC SDGFEFCCDN GERLRVTFAL DCCDREALHW AVTTGGFNSE TVQDVMLGAV ERRFGNDLPS SPVEWLTDNG SCYRANETRQ FARMLGLEPK NTAVRSPESN GIAESFVKTI KRDYISIMPK PDGLTAAKNL AEAFEHYNEW HPHSALGYRS PREYLRQRAC NGLSDNRCLE I
Length	301
Mol. Wt	34.397 kDa
pI	9.2 (calculated)
Extinction coefficient	50,420 - 51,545 (calc based on 8 Y, 7 W, and 9 C residues)
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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	Notes	References
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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=insD-6 taxon=562,83333 </beststructure>

Models

View models at:

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</protect>

Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
NCBI (Protein) (EcoliWiki Page)	GI:16128346	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:945203	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GI:16129363	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:945952	Escherichia coli str. K-12 substr. MG1655
ASAP (EcoliWiki Page)	ASAP:ABE-0005268	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:946118	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GI:16129937	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:946403	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GI:16130763	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:947346	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GI:16130941	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:947517	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GI:16132094	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:948779	Escherichia coli str. K-12 substr. MG1655
ASAP (EcoliWiki Page)	ASAP:ABE-0001239	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G6213	Escherichia coli str. K-12 substr. MG1655
EcoGene (EcoliWiki Page)	EcoGene:EG40004	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:945203	Escherichia coli str. K-12 substr. MG1655
ASAP (EcoliWiki Page)	ASAP:ABE-0004683	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G6723	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:945952	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G6836	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:946118	Escherichia coli str. K-12 substr. MG1655
ASAP (EcoliWiki Page)	ASAP:ABE-0006629	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G7076	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:946403	Escherichia coli str. K-12 substr. MG1655
ASAP (EcoliWiki Page)	ASAP:ABE-0009395	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G7480	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:947346	Escherichia coli str. K-12 substr. MG1655
ASAP (EcoliWiki Page)	ASAP:ABE-0009999	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G7584	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:947517	Escherichia coli str. K-12 substr. MG1655
ASAP (EcoliWiki Page)	ASAP:ABE-0014001	Escherichia coli str. K-12 substr. MG1655
EcoCyc (EcoliWiki Page)	ECOCYC:G7895	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:948779	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Cellular Levels

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See Help:Cellular levels

Molecule	Organism or Strain	Value	Units	Experimental Conditions	Assay used	Notes	Reference(s)
Protein	E. coli K-12 MG1655	1^a	molecules/cell/generation	Medium: MOPS Complete Temperature (°C): 37 Doubling time (min): *Growth phase: OD: other:	Ribosome Profiling	Low confidence in the sequencing data set.	PMID: 24766808
Protein	E. coli K-12 MG1655	0^a	molecules/cell/generation	Medium: MOPS Minimal Temperature (°C): 37 Doubling time (min): *Growth phase: OD: other:	Ribosome Profiling	Low confidence in the sequencing data set.	PMID: 24766808
Protein	E. coli K-12 MG1655	17^a	molecules/cell/generation	Medium: MOPS Complete without Methionine Temperature (°C): 37 Doubling time (min): *Growth phase: OD: other:	Ribosome Profiling	Low confidence in the sequencing data set.	PMID: 24766808
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Notes

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)
insCD-1
insCD-2
insCD-3
ygeM
insCD-5
insCD-6
dicB-ydfDE-insD-intD
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Figure courtesy of RegulonDB

</protect>

Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:380878..380918 source=MG1655 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

</protect>

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

</protect>

Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name	Mutation	Phenotype	Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type	Reference	Notes
microarray	GEO Profiles:b4273 (EcoliWiki Page)	NCBI GEO profiles for insD-6
microarray	GenExpDB:b4273 (EcoliWiki Page)	Summary of data for insD-6 from multiple microarray studies
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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name	Resource Type	Description	Source	Notes
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Notes

Accessions Related to insD-6 Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:G7895
EcoliGenExpDB (EcoliWiki Page)	EcoliGenExpDB:b4273
EchoBASE (EcoliWiki Page)	EchoBASE:EB4727
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Notes

Links

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Name	URL	Comments
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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism	Homologs (Statistics)	Comments
Oryza gramene	Q5CAG6 (score: 1.000; bootstrap: 100%) Q8H073 (score: 1.000; bootstrap: 100%)	From Inparanoid:20070104
Shigella flexneri	S0221	From SHIGELLACYC
E. coli O157	Z0322	From ECOO157CYC
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Database	Accession	Notes
Superfamily (EcoliWiki Page)	SUPERFAMILY:53098
Superfamily (EcoliWiki Page)	SUPERFAMILY:53098
Superfamily (EcoliWiki Page)	SUPERFAMILY:53098
Superfamily (EcoliWiki Page)	SUPERFAMILY:53098
Superfamily (EcoliWiki Page)	SUPERFAMILY:53098
Superfamily (EcoliWiki Page)	SUPERFAMILY:53098
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↑ ^1.00 ^1.01 ^1.02 ^1.03 ^1.04 ^1.05 ^1.06 ^1.07 ^1.08 ^1.09 ^1.10 ^1.11 ^1.12 ^1.13 ^1.14 ^1.15 ^1.16 ^1.17 ^1.18 ^1.19 ^1.20 ^1.21 ^1.22 ^1.23 ^1.24 ^1.25 ^1.26 ^1.27 ^1.28 ^1.29 ^1.30 ^1.31 ^1.32 ^1.33 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.00 ^3.01 ^3.02 ^3.03 ^3.04 ^3.05 ^3.06 ^3.07 ^3.08 ^3.09 ^3.10 ^3.11 ^3.12 ^3.13 ^3.14 ^3.15 ^3.16 ^3.17 ^3.18 ^3.19 ^3.20 ^3.21 ^3.22 ^3.23 ^3.24 ^3.25 ^3.26 ^3.27 ^3.28 ^3.29 ^3.30 ^3.31 ^3.32 ^3.33 ^3.34 ^3.35 ^3.36 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 CGSC: The Coli Genetics Stock Center
↑ ^5.0 ^5.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

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