insB-7 2:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

Quickview

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<protect> See Help:Quickview for help with entering information in the Quickview table.

Standard Name

insB-7_2

Gene Synonym(s)

insB, ECK0022, b0021, JW0020, b0264, JW0256, b0274, JW0268, b0988, JW0972, b1893, unique to MG1655, b3445, JW3409, b4563, JW4255, b4564, JW4256, b4576, JW4255+JW4256, unique to W3110, JW2285, insB-1, insB-2, insB-3, insB-4, insB-5, insB-6, insB-7_1[1][2][3]

Product Desc.

IS1 protein InsB[3][2]

Product Synonyms(s)

B0274[3], InsB-3[3], InsB-2[3], B0264[3]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): insAB-1[3], afuC[3], insAB-3[3], insAB-4[3], insAB-5[3], yhhZ[3]

Regulation/Activity
Quick Links

PortEco search(2)    DNA display    Protein display    Pubmed(2)    Textpresso(2)

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Notes

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Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

insB-7_2

Mnemonic
Synonyms

insB, ECK0022, b0021, JW0020, b0264, JW0256, b0274, JW0268, b0988, JW0972, b1893, unique to MG1655, b3445, JW3409, b4563, JW4255, b4564, JW4256, b4576, JW4255+JW4256, unique to W3110, JW2285, insB-1, insB-2, insB-3, insB-4, insB-5, insB-6, insB-7_1[1][2][3]

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

0.43 minutes 

MG1655: 20314..19811
<gbrowseImage> name=NC_000913:19811..20314 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 1322970..1323473
<gbrowseImage> name=NC_012967:1322970..1323473 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 353279..353782
<gbrowseImage> name=NC_012967:353279..353782 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 263041..263544
<gbrowseImage> name=NC_012967:263041..263544 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 4550928..4551431
<gbrowseImage> name=NC_012967:4550928..4551431 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 4521586..4522089
<gbrowseImage> name=NC_012967:4521586..4522089 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 4505357..4505860
<gbrowseImage> name=NC_012967:4505357..4505860 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 4478031..4478534
<gbrowseImage> name=NC_012759:4478031..4478534 source=BW2952 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 994837..995340
<gbrowseImage> name=NC_012759:994837..995340 source=BW2952 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 1193864..1194367
<gbrowseImage> name=NC_012967:1193864..1194367 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 23540..24043
<gbrowseImage> name=NC_012967:23540..24043 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 376764..377267
<gbrowseImage> name=NC_012967:376764..377267 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 546947..547450
<gbrowseImage> name=NC_012967:546947..547450 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 589570..590073
<gbrowseImage> name=NC_012967:589570..590073 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 619132..619635
<gbrowseImage> name=NC_012967:619132..619635 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 633993..634496
<gbrowseImage> name=NC_012967:633993..634496 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 3433477..3433980
<gbrowseImage> name=NC_012967:3433477..3433980 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 3023960..3024463
<gbrowseImage> name=NC_012967:3023960..3024463 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2822202..2822705
<gbrowseImage> name=NC_012967:2822202..2822705 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2682857..2683360
<gbrowseImage> name=NC_012967:2682857..2683360 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 241506..242009
<gbrowseImage> name=NC_012967:241506..242009 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2618278..2618781
<gbrowseImage> name=NC_012967:2618278..2618781 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2407457..2407960
<gbrowseImage> name=NC_012967:2407457..2407960 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2262755..2263258
<gbrowseImage> name=NC_012967:2262755..2263258 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2143079..2143582
<gbrowseImage> name=NC_012967:2143079..2143582 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2128849..2129352
<gbrowseImage> name=NC_012967:2128849..2129352 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 1460409..1460912
<gbrowseImage> name=NC_012967:1460409..1460912 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 1973521..1974024
<gbrowseImage> name=NC_012967:1973521..1974024 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2034341..2034844
<gbrowseImage> name=NC_012967:2034341..2034844 source=REL606 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 3741213..3741716
<gbrowseImage> name=NC_012967:3741213..3741716 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 1178223..1178726
<gbrowseImage> name=NC_012759:1178223..1178726 source=BW2952 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 19811..20314
<gbrowseImage> name=NC_012759:19811..20314 source=BW2952 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 3470194..3470697
<gbrowseImage> name=NC_012759:3470194..3470697 source=BW2952 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 952218..952721
<gbrowseImage> name=NC_012759:952218..952721 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 20314..19811
<gbrowseImage> name=NC_007779:19811..20314 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

6 minutes 

MG1655: 278905..278402
<gbrowseImage> name=NC_000913:278402..278905 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 278905..278402
<gbrowseImage> name=NC_007779:278402..278905 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

6.25 minutes 

MG1655: 290376..289873
<gbrowseImage> name=NC_000913:289873..290376 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 290376..289873
<gbrowseImage> name=NC_007779:289873..290376 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

22.61 minutes 

MG1655: 1049250..1049753
<gbrowseImage> name=NC_000913:1049250..1049753 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 1050449..1050952
<gbrowseImage> name=NC_007779:1050449..1050952 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

42.6 minutes 

MG1655: 1977045..1976542
<gbrowseImage> name=NC_000913:1976542..1977045 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 0..0
<gbrowseImage> name=NC_007779:0..0 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

77.2 minutes 

MG1655: 3581700..3582203
<gbrowseImage> name=NC_000913:3581700..3582203 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 4056738..4056235
<gbrowseImage> name=NC_007779:4056235..4056738 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

97.35 minutes 

MG1655: 4516744..4517037
<gbrowseImage> name=NC_000913:4516744..4517037 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 4523401..4523694
<gbrowseImage> name=NC_007779:4523401..4523694 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

97.36 minutes 

MG1655: 4517038..4517247
<gbrowseImage> name=NC_000913:4517038..4517247 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 4523695..4523904
<gbrowseImage> name=NC_007779:4523695..4523904 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

 

MG1655: 4516744..4517247
<gbrowseImage> name=NC_000913:4516744..4517247 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 4523401..4523904
<gbrowseImage> name=NC_007779:4523401..4523904 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

 

MG1655: 0..0
<gbrowseImage> name=NC_000913:0..0 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 2411976..2411473
<gbrowseImage> name=NC_007779:2411473..2411976 source=W3110 preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

Plasmid clone

Shigen

PMID:16769691

Status:

Primer 1:

Primer 2:

6H3

Kohara Phage

Genobase

PMID:3038334

22B12

Kohara Phage

Genobase

PMID:3038334

5A5

Kohara Phage

Genobase

PMID:3038334

3C7

Kohara Phage

Genobase

PMID:3038334

3C7

Kohara Phage

Genobase

PMID:3038334

21C10

Kohara Phage

Genobase

PMID:3038334

4H11

Kohara Phage

Genobase

PMID:3038334

2F1

Kohara Phage

Genobase

PMID:3038334

9C2

Kohara Phage

Genobase

PMID:3038334

10F5

Kohara Phage

Genobase

PMID:3038334

16A5

Kohara Phage

Genobase

PMID:3038334

7G7

Kohara Phage

Genobase

PMID:3038334

9H9

Kohara Phage

Genobase

PMID:3038334

zjf-920::Tn10

Linked marker

CAG12019 = CGSC7484[4]

est. P1 cotransduction: 1% [5]
Synonyms:zjh-901::Tn10, zjg-920::Tn10

mdoB202::Tn10

Linked marker

CAG18430 = CGSC7488[4]

est. P1 cotransduction: 1% [5]
Synonyms:zjj-202::Tn10, zji-202::Tn10

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

ECOCYC:G6085

Escherichia coli str. K-12 substr. MG1655

EcoGene (EcoliWiki Page)

EcoGene:EG40002

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G6138

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:944743

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:947698

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G6145

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:944950

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G6509

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:945009

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G7029

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:945867

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G7762

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:947949

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:4056034

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

InsB-1

Synonyms

B0274[3], InsB-3[3], InsB-2[3], B0264[3] , ECK0022, b0021, b0264, b0274, b0988, b1893, b3445, b4576

Product description

IS1 protein InsB[3][2]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology

IS1 protein InsB

See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions

IS1 protein InsB

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MPGNRPHYGR WPQHDFPPFK KLRPQSVTSR IQPGSDVIVC AEMDEQWGYV GAKSRQRWLF
YAYDRLRKTV VAHVFGERTM ATLGRLMSLL SPFDVVIWMT DGWPLYESRL KGKLHVISKR
YTQRIERHNL NLRQHLARLG RKSLSFSKSV EQHDKVIGHY LNIKHYQ
Length

167

Mol. Wt

19.757 kDa

pI

10.7 (calculated)

Extinction coefficient

39,420 - 39,545 (calc based on 8 Y, 5 W, and 1 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

37..167

PF03400 IS1 transposase

PMID:19920124

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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=insB-7_2 taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128015

Escherichia coli str. K-12 substr. MG1655

ASAP (EcoliWiki Page)

ASAP:ABE-0000075

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G6085

Escherichia coli str. K-12 substr. MG1655

EcoGene (EcoliWiki Page)

EcoGene:EG40002

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:944743

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:944743

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GI:16128249

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947698

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GI:16128259

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:944950

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GI:16128954

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945009

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GI:16129845

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945867

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GI:16131317

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947949

Escherichia coli str. K-12 substr. MG1655

ASAP (EcoliWiki Page)

ASAP:ABE-0285109

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:4056034

Escherichia coli str. K-12 substr. MG1655

ASAP (EcoliWiki Page)

ASAP:ABE-0000906

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G6138

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947698

Escherichia coli str. K-12 substr. MG1655

ASAP (EcoliWiki Page)

ASAP:ABE-0000948

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G6145

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:944950

Escherichia coli str. K-12 substr. MG1655

ASAP (EcoliWiki Page)

ASAP:ABE-0003338

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G6509

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945009

Escherichia coli str. K-12 substr. MG1655

ASAP (EcoliWiki Page)

ASAP:ABE-0006308

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G7029

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945867

Escherichia coli str. K-12 substr. MG1655

ASAP (EcoliWiki Page)

ASAP:ABE-0011251

Escherichia coli str. K-12 substr. MG1655

EcoCyc (EcoliWiki Page)

ECOCYC:G7762

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947949

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:4056034

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MG1655

2a

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

Low confidence in the sequencing data set.

PMID: 24766808

Protein

E. coli K-12 MG1655

0a

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

Low confidence in the sequencing data set.

PMID: 24766808

Protein

E. coli K-12 MG1655

3a

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

Low confidence in the sequencing data set.

PMID: 24766808

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Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

insAB-1

afuC

insAB-3

insAB-4

insAB-5

yhhZ

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Figure courtesy of RegulonDB

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Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:20294..20334 source=MG1655 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

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Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b0988 (EcoliWiki Page)

NCBI GEO profiles for insB-7_2

microarray

GenExpDB:b0988 (EcoliWiki Page)

Summary of data for insB-7_2 from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to insB-7_2 Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G0-10570

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b0988

EchoBASE (EcoliWiki Page)

EchoBASE:EB4719


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Notes

Links

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Xenopus tropicalis

  • ENSXETP00000047495 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

S0020

From SHIGELLACYC

E. coli O157

Z5491

From ECOO157CYC

Xenopus tropicalis

  • ENSXETP00000047495 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

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Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03400 IS1 transposase


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 3.11 3.12 3.13 3.14 3.15 3.16 3.17 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 CGSC: The Coli Genetics Stock Center
  5. ↑ 5.0 5.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

Categories

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