rpsL:Gene: Difference between revisions

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Line 14: Line 14:
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
Line 31: Line 33:
*  
*  
****************************************************************************************** -->{{Gene_nomenclature_help}}
****************************************************************************************** -->{{Gene_nomenclature_help}}
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{|   id="L46a9f38ae65ec" class=" tableEdit Gene_nomenclature_table"


|-
|-
!align=left {{table_heading_style}} |Standard name
!align=left {{table_heading_style}} |Standard name
||
||
''rpsL''  
''rpsL''
|-
|-
!align=left {{table_heading_style}} |Mnemonic
!align=left {{table_heading_style}} |Mnemonic
||
||
 
Ribosomal protein, small
|-
|-
!align=left {{table_heading_style}} |Synonyms
!align=left {{table_heading_style}} |Synonyms
||
||
''ECK3329, b3342, JW3304, asuB, strA''<ref name='LIB:Riley_2006'/>
''ECK3329, b3342, JW3304, asuB, strA''<ref name='LIB:Riley_2006'/>, strA''


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*  
*  
****************************************************************************************** -->{{Gene_location_help}}
****************************************************************************************** -->{{Gene_location_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="J46a9f38b72dcb"  class=" tableEdit Gene_location_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
Line 74: Line 76:
74.84 minutes&nbsp;
74.84 minutes&nbsp;
|
|
MG1655: 3472574..3472200<br />{{GBrowseFigureByCoord|3471200|3473574|ecoli|MG1655}}
MG1655: 3472574..3472200<br /><gbrowseImage>
name=NC_000913:3472200..3472574
source=MG1655
preset=GeneLocation
</gbrowseImage>
 
|
|
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG10911 EcoCyc]
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG10911 EcoCyc]
{{GBrowseLink|ecoli|NC_000913|3471200|3473574|GBrowse(MG1655)}}
{{GBrowseLink|MG1655|NC_000913|3471200|3473574|GBrowse(MG1655)}}
   
   
|
|
{{GBrowseFastaLink|ecoli|NC_000913|3472200|3472574|FASTA Dump}}
{{GBrowseFastaLink|MG1655|NC_000913|3472200|3472574|FASTA Dump}}
*[http://biocyc.org/ECOLI/sequence?object=EG10911 EcoCyc Sequence Dump]  
*[http://biocyc.org/ECOLI/sequence?object=EG10911 EcoCyc Sequence Dump]  
|-
|
[[REL606]]
|
|
NC_012967: 3402457..3402083<br /><gbrowseImage>
name=NC_012967:3402083..3402457
source=REL606
preset=GeneLocation
</gbrowseImage>
|
{{GBrowseLink|REL606|NC_012967|3402083|3402457|GBrowse (REL606)}}
|
{{GBrowseFastaLink|REL606|NC_012967|3402083|3402457|FASTA Dump}}
|-
|
[[BW2952]]
|
|
NC_012759: 3359357..3359731<br /><gbrowseImage>
name=NC_012759:3359357..3359731
source=BW2952
preset=GeneLocation
</gbrowseImage>
|
{{GBrowseLink|BW2952|NC_012759|3359357|3359731|GBrowse (BW2952)}}
|
{{GBrowseFastaLink|BW2952|NC_012759|3359357|3359731|FASTA Dump}}
|-  
|-  
|
|
Line 88: Line 127:
&nbsp;
&nbsp;
|
|
W3110: 4165864..4166238<br />{{GBrowseFigureByCoord|4164864|4167238|ecoli_W3110|W3110}}
W3110: 4165864..4166238<br /><gbrowseImage>
name=NC_007779:4165864..4166238
source=W3110
preset=GeneLocation
</gbrowseImage>
 
|
|
{{GBrowseLink|ecoli_W3110|AC_000091|4164864|4167238|GBrowse(W3110)}}  
{{GBrowseLink|W3110|NC_007779|4164864|4167238|GBrowse(W3110)}}  
|
|
{{GBrowseFastaLink|ecoli_W3110|AC_000091|4165864|4166238|FASTA Dump}}  
{{GBrowseFastaLink|W3110|NC_007779|4165864|4166238|FASTA Dump}}  


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*  
*  
****************************************************************************************** -->{{Gene_sequence_features_help}}
****************************************************************************************** -->{{Gene_sequence_features_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="G46a9f38c3318e"  class=" tableEdit Gene_sequence_features_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Feature type!!Location!!Description
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
|-
|
Coding Start (SO:0000323)
|
[[MG1655]]
|
3472203
|
Edman degradation
|
PMID:320034<br />
|


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*  
*  
****************************************************************************************** -->{{Gene_alleles_help}}
****************************************************************************************** -->{{Gene_alleles_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}}
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="D46a9f38c7bb13"  class=" tableEdit Gene_allele_table dataTable" 
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
Line 156: Line 213:
|-  
|-  
|
|
''rpsL136''(strR)
rpsLK43R
|
|


|
|
 
K43R
|
|


|
|
streptomycin resistant
(confers streptomycin resistance but not hyperaccurate translation)
|
|


|
|
[[cgscmutation:4522|CGSC:4522]]
 
|
|
Strain variation; seeded from [http://www.uniprot.org/uniprot/P0A7S3 UniProt:P0A7S3]
|-  
|-  
|
|
''rpsL31''(strR)
rpsLL57H
|
|


|
|
 
L57H
|
|


|
|
streptomycin resistant
Protein is not incorporated into ribosomes
|
|


|
|
[[cgscmutation:4510|CGSC:4510]]
 
|
|
seeded from [http://www.uniprot.org/uniprot/P0A7S3 UniProt:P0A7S3]
|-  
|-  
|
|
''rpsL8''
rpsLK88Q
|
|


|
K88Q
|
|


|
|
 
Confers low-level resistance to streptomycin and a 15% decrease in the translational elongation rate
|
|


Line 202: Line 261:


|
|
[[cgscmutation:4650|CGSC:4650]]
seeded from [http://www.uniprot.org/uniprot/P0A7S3 UniProt:P0A7S3]  
|
|-  
|-  
|
|
''rpsL118''(strR)
''rpsL136''(strR)
|
|


Line 219: Line 276:


|
|
[[cgscmutation:4748|CGSC:4748]]
[[cgscmutation:4522|CGSC:4522]]
|
|
   
   
|-  
|-  
|
|
''rpsL200''(strR)
''rpsL31''(strR)
|
|


Line 236: Line 293:


|
|
[[cgscmutation:4764|CGSC:4764]]
[[cgscmutation:4510|CGSC:4510]]
|
|
   
   
|-  
|-  
|
|
''rpsL104''
''rpsL8''
|
|


Line 253: Line 310:


|
|
[[cgscmutation:4888|CGSC:4888]]
[[cgscmutation:4650|CGSC:4650]]
|
|
   
   
|-  
|-  
|
|
''rpsL109''(strR)
''rpsL118''(strR)
|
|


Line 270: Line 327:


|
|
[[cgscmutation:4933|CGSC:4933]]
[[cgscmutation:4748|CGSC:4748]]
|
|
   
   
|-  
|-  
|
|
''rpsL151''(strR)
''rpsL200''(strR)
|
|


Line 287: Line 344:


|
|
[[cgscmutation:5028|CGSC:5028]]
[[cgscmutation:4764|CGSC:4764]]
|
|
   
   
|-  
|-  
|
|
''rpsL195''(strR)
''rpsL104''
|
|


Line 300: Line 357:


|
|
streptomycin resistant
 
|
|


|
|
[[cgscmutation:5051|CGSC:5051]]
[[cgscmutation:4888|CGSC:4888]]
|
|
   
   
|-  
|-  
|
|
''rpsL134''(strR)
''rpsL109''(strR)
|
|


Line 321: Line 378:


|
|
[[cgscmutation:5092|CGSC:5092]]
[[cgscmutation:4933|CGSC:4933]]
|
|
   
   
|-  
|-  
|
|
''rpsL175''(strR)
''rpsL151''(strR)
|
|


Line 338: Line 395:


|
|
[[cgscmutation:5097|CGSC:5097]]
[[cgscmutation:5028|CGSC:5028]]
|
|
   
   
|-  
|-  
|
|
''rpsL153''(strR)
''rpsL195''(strR)
|
|


Line 355: Line 412:


|
|
[[cgscmutation:5174|CGSC:5174]]
[[cgscmutation:5051|CGSC:5051]]
|
|
   
   
|-  
|-  
|
|
''rpsL67''(strR)
''rpsL134''(strR)
|
|


Line 372: Line 429:


|
|
[[cgscmutation:5230|CGSC:5230]]
[[cgscmutation:5092|CGSC:5092]]
|
|
   
   
|-  
|-  
|
|
''rpsL135''(strR)
''rpsL175''(strR)
|
|


Line 389: Line 446:


|
|
[[cgscmutation:5280|CGSC:5280]]
[[cgscmutation:5097|CGSC:5097]]
|
|
   
   
|-  
|-  
|
|
''rpsL125''(strR)
''rpsL153''(strR)
|
|


Line 406: Line 463:


|
|
[[cgscmutation:5300|CGSC:5300]]
[[cgscmutation:5174|CGSC:5174]]
|
|
   
   
|-  
|-  
|
|
''rpsL155''(strR)
''rpsL67''(strR)
|
|


Line 423: Line 480:


|
|
[[cgscmutation:5385|CGSC:5385]]
[[cgscmutation:5230|CGSC:5230]]
|
|
   
   
|-  
|-  
|
|
''rpsL150''(strR)
''rpsL135''(strR)
|
|


Line 440: Line 497:


|
|
[[cgscmutation:5414|CGSC:5414]]
[[cgscmutation:5280|CGSC:5280]]
|
|
   
   
|-  
|-  
|
|
''rpsL100''(strR)
''rpsL125''(strR)
|
|


Line 457: Line 514:


|
|
[[cgscmutation:5475|CGSC:5475]]
[[cgscmutation:5300|CGSC:5300]]
|
|
   
   
|-  
|-  
|
|
''rpsL181''(strR)
''rpsL155''(strR)
|
|


Line 474: Line 531:


|
|
[[cgscmutation:5536|CGSC:5536]]
[[cgscmutation:5385|CGSC:5385]]
|
|
   
   
|-  
|-  
|
|
''rpsL178''(strR)
''rpsL150''(strR)
|
|


Line 491: Line 548:


|
|
[[cgscmutation:5550|CGSC:5550]]
[[cgscmutation:5414|CGSC:5414]]
|
|
   
   
|-  
|-  
|
|
''rpsL172''(strR)
''rpsL100''(strR)
|
|


Line 508: Line 565:


|
|
[[cgscmutation:5578|CGSC:5578]]
[[cgscmutation:5475|CGSC:5475]]
|
|
   
   
|-  
|-  
|
|
''rpsL173''(strR)
''rpsL181''(strR)
|
|


Line 525: Line 582:


|
|
[[cgscmutation:5587|CGSC:5587]]
[[cgscmutation:5536|CGSC:5536]]
|
|
   
   
|-  
|-  
|
|
''rpsL223''(strR)
''rpsL178''(strR)
|
|


Line 542: Line 599:


|
|
[[cgscmutation:5720|CGSC:5720]]
[[cgscmutation:5550|CGSC:5550]]
|
|
   
   
|-  
|-  
|
|
''rpsL129''(strR)
''rpsL172''(strR)
|
|


Line 559: Line 616:


|
|
[[cgscmutation:5773|CGSC:5773]]
[[cgscmutation:5578|CGSC:5578]]
|
|
   
   
|-  
|-  
|
|
''rpsL99''(strR)
''rpsL173''(strR)
|
|


Line 576: Line 633:


|
|
[[cgscmutation:5785|CGSC:5785]]
[[cgscmutation:5587|CGSC:5587]]
|
|
   
   
|-  
|-  
|
|
''rpsL14''
''rpsL223''(strR)
|
|


Line 589: Line 646:


|
|
 
streptomycin resistant
|
|


|
|
[[cgscmutation:5791|CGSC:5791]]
[[cgscmutation:5720|CGSC:5720]]
|
|
   
   
|-  
|-  
|
|
''rpsL700''(strR)
''rpsL129''(strR)
|
|


Line 610: Line 667:


|
|
[[cgscmutation:5803|CGSC:5803]]
[[cgscmutation:5773|CGSC:5773]]
|
|
   
   
|-  
|-  
|
|
''rpsL97''(strR)
''rpsL99''(strR)
|
|


Line 627: Line 684:


|
|
[[cgscmutation:5834|CGSC:5834]]
[[cgscmutation:5785|CGSC:5785]]
|
|
   
   
|-  
|-  
|
|
''rpsL78''(strR)
''rpsL14''
|
|


Line 640: Line 697:


|
|
streptomycin resistant
 
|
|


|
|
[[cgscmutation:5940|CGSC:5940]]
[[cgscmutation:5791|CGSC:5791]]
|
|
   
   
|-  
|-  
|
|
''rpsL39''(StrD)
''rpsL700''(strR)
|
|


Line 657: Line 714:


|
|
streptomycin dependent
streptomycin resistant
|
|


|
|
[[cgscmutation:5991|CGSC:5991]]
[[cgscmutation:5803|CGSC:5803]]
|
|
   
   
|-  
|-  
|
|
''rpsL101''(strR)
''rpsL97''(strR)
|
|


Line 678: Line 735:


|
|
[[cgscmutation:6009|CGSC:6009]]
[[cgscmutation:5834|CGSC:5834]]
|
|
   
   
|-  
|-  
|
|
''rpsL45''(strR)
''rpsL78''(strR)
|
|


Line 695: Line 752:


|
|
[[cgscmutation:6053|CGSC:6053]]
[[cgscmutation:5940|CGSC:5940]]
|
|
   
   
|-  
|-  
|
|
''rpsL265''(strR)
''rpsL39''(StrD)
|
|


Line 708: Line 765:


|
|
streptomycin resistant
streptomycin dependent
|
|


|
|
[[cgscmutation:6113|CGSC:6113]]
[[cgscmutation:5991|CGSC:5991]]
|
|
   
   
|-  
|-  
|
|
''rpsL704''(strR)
''rpsL101''(strR)
|
|


Line 729: Line 786:


|
|
[[cgscmutation:6176|CGSC:6176]]
[[cgscmutation:6009|CGSC:6009]]
|
|
   
   
|-  
|-  
|
|
''rpsL186''(strR)
''rpsL45''(strR)
|
|


Line 746: Line 803:


|
|
[[cgscmutation:6191|CGSC:6191]]
[[cgscmutation:6053|CGSC:6053]]
|
|
   
   
|-  
|-  
|
|
''rpsL17''
''rpsL265''(strR)
|
|


Line 759: Line 816:


|
|
 
streptomycin resistant
|
|


|
|
[[cgscmutation:6221|CGSC:6221]]
[[cgscmutation:6113|CGSC:6113]]
|
|
   
   
|-  
|-  
|
|
''rpsL198''(strR)
''rpsL704''(strR)
|
|


Line 780: Line 837:


|
|
[[cgscmutation:6284|CGSC:6284]]
[[cgscmutation:6176|CGSC:6176]]
|
|
   
   
|-  
|-  
|
|
''rpsL197''(strR)
''rpsL186''(strR)
|
|


Line 797: Line 854:


|
|
[[cgscmutation:6295|CGSC:6295]]
[[cgscmutation:6191|CGSC:6191]]
|
|
   
   
|-  
|-  
|
|
''rpsL179''(strR)
''rpsL17''
|
|


Line 810: Line 867:


|
|
streptomycin resistant
 
|
|


|
|
[[cgscmutation:6334|CGSC:6334]]
[[cgscmutation:6221|CGSC:6221]]
|
|
   
   
|-  
|-  
|
|
''rpsL117''(strR)
''rpsL198''(strR)
|
|


Line 831: Line 888:


|
|
[[cgscmutation:6364|CGSC:6364]]
[[cgscmutation:6284|CGSC:6284]]
|
|
   
   
|-  
|-  
|
|
''rpsL126''(strR)
''rpsL197''(strR)
|
|


Line 848: Line 905:


|
|
[[cgscmutation:6369|CGSC:6369]]
[[cgscmutation:6295|CGSC:6295]]
|
|
   
   
|-  
|-  
|
|
''rpsL25''(strR)
''rpsL179''(strR)
|
|


Line 865: Line 922:


|
|
[[cgscmutation:6532|CGSC:6532]]
[[cgscmutation:6334|CGSC:6334]]
|
|
   
   
|-  
|-  
|
|
''rpsL196''(strR)
''rpsL117''(strR)
|
|


Line 882: Line 939:


|
|
[[cgscmutation:6542|CGSC:6542]]
[[cgscmutation:6364|CGSC:6364]]
|
|
   
   
|-  
|-  
|
|
''rpsL213''(strR)
''rpsL126''(strR)
|
|


Line 899: Line 956:


|
|
[[cgscmutation:6638|CGSC:6638]]
[[cgscmutation:6369|CGSC:6369]]
|
|
   
   
|-  
|-  
|
|
''rpsL212''(strR)
''rpsL25''(strR)
|
|


Line 914: Line 971:
streptomycin resistant
streptomycin resistant
|
|
PMID:1089639 PMID:1094452
 
|
|
[[cgscmutation:6642|CGSC:6642]]
[[cgscmutation:6532|CGSC:6532]]
|
|
   
   
|-  
|-  
|
|
''rpsL124''(strR)
''rpsL196''(strR)
|
|


Line 933: Line 990:


|
|
[[cgscmutation:6646|CGSC:6646]]
[[cgscmutation:6542|CGSC:6542]]
|
|
   
   
|-  
|-  
|
|
''rpsL214''(strR)
''rpsL213''(strR)
|
|


Line 950: Line 1,007:


|
|
[[cgscmutation:6650|CGSC:6650]]
[[cgscmutation:6638|CGSC:6638]]
|
|
   
   
|-  
|-  
|
|
''rpsL228''(strR)
''rpsL212''(strR)
|
|


Line 965: Line 1,022:
streptomycin resistant
streptomycin resistant
|
|
 
PMID:1089639 PMID:1094452
|
|
[[cgscmutation:6694|CGSC:6694]]
[[cgscmutation:6642|CGSC:6642]]
|
|
   
   
|-  
|-  
|
|
''rpsL231''(strR)
''rpsL124''(strR)
|
|


Line 984: Line 1,041:


|
|
[[cgscmutation:6741|CGSC:6741]]
[[cgscmutation:6646|CGSC:6646]]
|
|
   
   
|-  
|-  
|
|
''rpsL999''(strR)
''rpsL214''(strR)
|
|


Line 1,001: Line 1,058:


|
|
[[cgscmutation:6885|CGSC:6885]]
[[cgscmutation:6650|CGSC:6650]]
|
|
   
   
|-  
|-  
|
|
''rpsL254''(strR)
''rpsL228''(strR)
|
|


Line 1,018: Line 1,075:


|
|
[[cgscmutation:6967|CGSC:6967]]
[[cgscmutation:6694|CGSC:6694]]
|
|
   
   
|-  
|-  
|
|
''rpsL255''
''rpsL231''(strR)
|
|


Line 1,031: Line 1,088:


|
|
 
streptomycin resistant
|
|


|
|
[[cgscmutation:7010|CGSC:7010]]
[[cgscmutation:6741|CGSC:6741]]
|
|
   
   
|-  
|-  
|
|
''rpsL261''(strR)
''rpsL999''(strR)
|
|


Line 1,052: Line 1,109:


|
|
[[cgscmutation:7047|CGSC:7047]]
[[cgscmutation:6885|CGSC:6885]]
|
|
   
   
|-  
|-  
|
|
''rpsL35''(strR)
''rpsL254''(strR)
|
|


Line 1,069: Line 1,126:


|
|
[[cgscmutation:7214|CGSC:7214]]
[[cgscmutation:6967|CGSC:6967]]
|
|
   
   
|-  
|-  
|
|
''rpsL146''(strR)
''rpsL255''
|
|


Line 1,082: Line 1,139:


|
|
streptomycin resistant
 
|
|


|
|
[[cgscmutation:7262|CGSC:7262]]
[[cgscmutation:7010|CGSC:7010]]
|
|
   
   
|-  
|-  
|
|
''rpsL110''(strR)
''rpsL261''(strR)
|
|


Line 1,103: Line 1,160:


|
|
[[cgscmutation:7303|CGSC:7303]]
[[cgscmutation:7047|CGSC:7047]]
|
|
   
   
|-  
|-  
|
|
''rpsL145''(strR)
''rpsL35''(strR)
|
|


Line 1,120: Line 1,177:


|
|
[[cgscmutation:7333|CGSC:7333]]
[[cgscmutation:7214|CGSC:7214]]
|
|
   
   
|-  
|-  
|
|
''rpsL257''(strR)
''rpsL146''(strR)
|
|


Line 1,137: Line 1,194:


|
|
[[cgscmutation:7347|CGSC:7347]]
[[cgscmutation:7262|CGSC:7262]]
|
|
   
   
|-  
|-  
|
|
''rpsL284''(strR)
''rpsL110''(strR)
|
|


Line 1,154: Line 1,211:


|
|
[[cgscmutation:7560|CGSC:7560]]
[[cgscmutation:7303|CGSC:7303]]
|
|
   
   
|-  
|-  
|
|
''rpsL283''(strR)
''rpsL145''(strR)
|
|


Line 1,171: Line 1,228:


|
|
[[cgscmutation:7566|CGSC:7566]]
[[cgscmutation:7333|CGSC:7333]]
|
|
   
   
|-  
|-  
|
|
''rpsL180''(strR)
''rpsL257''(strR)
|
|


Line 1,188: Line 1,245:


|
|
[[cgscmutation:7620|CGSC:7620]]
[[cgscmutation:7347|CGSC:7347]]
|
|
   
   
|-  
|-  
|
|
''rpsL182''(strR)
''rpsL284''(strR)
|
|


Line 1,205: Line 1,262:


|
|
[[cgscmutation:7730|CGSC:7730]]
[[cgscmutation:7560|CGSC:7560]]
|
|
   
   
|-  
|-  
|
|
''rpsL204''(strR)
''rpsL283''(strR)
|
|


Line 1,222: Line 1,279:


|
|
[[cgscmutation:7734|CGSC:7734]]
[[cgscmutation:7566|CGSC:7566]]
|
|
   
   
|-  
|-  
|
|
''[rpsL203]''(strR)
''rpsL180''(strR)
|
|


Line 1,239: Line 1,296:


|
|
[[cgscmutation:7741|CGSC:7741]]
[[cgscmutation:7620|CGSC:7620]]
|
|
   
   
|-  
|-  
|
|
''rpsL160''(strR)
''rpsL182''(strR)
|
|


Line 1,256: Line 1,313:


|
|
[[cgscmutation:7844|CGSC:7844]]
[[cgscmutation:7730|CGSC:7730]]
|
|
   
   
|-  
|-  
|
|
''rpsL140''(strR)
''rpsL204''(strR)
|
|


Line 1,273: Line 1,330:


|
|
[[cgscmutation:7859|CGSC:7859]]
[[cgscmutation:7734|CGSC:7734]]
|
|
   
   
|-  
|-  
|
|
''rpsL149''(strR)
''[rpsL203]''(strR)
|
|


Line 1,290: Line 1,347:


|
|
[[cgscmutation:7933|CGSC:7933]]
[[cgscmutation:7741|CGSC:7741]]
|
|
   
   
|-  
|-  
|
|
''rpsL157''(strR)
''rpsL160''(strR)
|
|


Line 1,307: Line 1,364:


|
|
[[cgscmutation:8004|CGSC:8004]]
[[cgscmutation:7844|CGSC:7844]]
|
|
   
   
|-  
|-  
|
|
''rpsL115''(strR)
''rpsL140''(strR)
|
|


Line 1,324: Line 1,381:


|
|
[[cgscmutation:8089|CGSC:8089]]
[[cgscmutation:7859|CGSC:7859]]
|
|
   
   
|-  
|-  
|
|
''rpsL20''(strR)
''rpsL149''(strR)
|
|


Line 1,341: Line 1,398:


|
|
[[cgscmutation:8208|CGSC:8208]]
[[cgscmutation:7933|CGSC:7933]]
|
|
   
   
|-  
|-  
|
|
''rpsL62''(strR)
''rpsL157''(strR)
|
|


Line 1,358: Line 1,415:


|
|
[[cgscmutation:8248|CGSC:8248]]
[[cgscmutation:8004|CGSC:8004]]
|
|
   
   
|-  
|-  
|
|
''rpsL201''(strR)
''rpsL115''(strR)
|
|


Line 1,375: Line 1,432:


|
|
[[cgscmutation:8302|CGSC:8302]]
[[cgscmutation:8089|CGSC:8089]]
|
|
   
   
|-  
|-  
|
|
''rpsL192''(strR)
''rpsL20''(strR)
|
|


Line 1,392: Line 1,449:


|
|
[[cgscmutation:8303|CGSC:8303]]
[[cgscmutation:8208|CGSC:8208]]
|
|
   
   
|-  
|-  
|
|
''rpsL190''(strR)
''rpsL62''(strR)
|
|


Line 1,409: Line 1,466:


|
|
[[cgscmutation:8304|CGSC:8304]]
[[cgscmutation:8248|CGSC:8248]]
|
|
   
   
|-  
|-  
|
|
''rpsL194''(strR)
''rpsL201''(strR)
|
|


Line 1,426: Line 1,483:


|
|
[[cgscmutation:8305|CGSC:8305]]
[[cgscmutation:8302|CGSC:8302]]
|
|
   
   
|-  
|-  
|
|
''rpsL193''(strR)
''rpsL192''(strR)
|
|


Line 1,443: Line 1,500:


|
|
[[cgscmutation:8306|CGSC:8306]]
[[cgscmutation:8303|CGSC:8303]]
|
|
   
   
|-  
|-  
|
|
''rpsL56''(strR)
''rpsL190''(strR)
|
|


Line 1,460: Line 1,517:


|
|
[[cgscmutation:8334|CGSC:8334]]
[[cgscmutation:8304|CGSC:8304]]
|
|
   
   
|-  
|-  
|
|
''rpsL171''(strR)
''rpsL194''(strR)
|
|


Line 1,477: Line 1,534:


|
|
[[cgscmutation:8424|CGSC:8424]]
[[cgscmutation:8305|CGSC:8305]]
|
|
   
   
|-  
|-  
|
|
''rpsL230''(strR)
''rpsL193''(strR)
|
|


Line 1,494: Line 1,551:


|
|
[[cgscmutation:8538|CGSC:8538]]
[[cgscmutation:8306|CGSC:8306]]
|
|
   
   
|-  
|-  
|
|
''rpsL273''(strR)
''rpsL56''(strR)
|
|


Line 1,511: Line 1,568:


|
|
[[cgscmutation:8781|CGSC:8781]]
[[cgscmutation:8334|CGSC:8334]]
|
|
   
   
|-  
|-  
|
|
''rpsL132''(strR)
''rpsL171''(strR)
|
|


Line 1,528: Line 1,585:


|
|
[[cgscmutation:8811|CGSC:8811]]
[[cgscmutation:8424|CGSC:8424]]
|
|
   
   
|-  
|-  
|
|
''rpsL174''(strR)
''rpsL230''(strR)
|
|


Line 1,545: Line 1,602:


|
|
[[cgscmutation:8902|CGSC:8902]]
[[cgscmutation:8538|CGSC:8538]]
|
|
   
   
|-  
|-  
|
|
''rpsL159''(strR)
''rpsL273''(strR)
|
|


Line 1,562: Line 1,619:


|
|
[[cgscmutation:9102|CGSC:9102]]
[[cgscmutation:8781|CGSC:8781]]
|
|
   
   
|-  
|-  
|
|
''rpsL27''(strR)
''rpsL132''(strR)
|
|


Line 1,579: Line 1,636:


|
|
[[cgscmutation:9123|CGSC:9123]]
[[cgscmutation:8811|CGSC:8811]]
|
|
   
   
|-  
|-  
|
|
''rpsL138''(strR)
''rpsL174''(strR)
|
|


Line 1,596: Line 1,653:


|
|
[[cgscmutation:9352|CGSC:9352]]
[[cgscmutation:8902|CGSC:8902]]
|
|
   
   
|-  
|-  
|
|
''rpsL69''(strR)
''rpsL159''(strR)
|
|


Line 1,613: Line 1,670:


|
|
[[cgscmutation:9428|CGSC:9428]]
[[cgscmutation:9102|CGSC:9102]]
|
|
   
   
|-  
|-  
|
|
''rpsL71''(strR)
''rpsL27''(strR)
|
|


Line 1,630: Line 1,687:


|
|
[[cgscmutation:9433|CGSC:9433]]
[[cgscmutation:9123|CGSC:9123]]
|
|
   
   
|-  
|-  
|
|
''rpsL24''(strR)
''rpsL138''(strR)
|
|


Line 1,647: Line 1,704:


|
|
[[cgscmutation:9606|CGSC:9606]]
[[cgscmutation:9352|CGSC:9352]]
|
|
   
   
|-  
|-  
|
|
''rpsL281''(strR)
''rpsL69''(strR)
|
|


Line 1,664: Line 1,721:


|
|
[[cgscmutation:9729|CGSC:9729]]
[[cgscmutation:9428|CGSC:9428]]
|
|
   
   
|-  
|-  
|
|
''rpsL263''(strR)
''rpsL71''(strR)
|
|


Line 1,681: Line 1,738:


|
|
[[cgscmutation:9830|CGSC:9830]]
[[cgscmutation:9433|CGSC:9433]]
|
|
   
   
|-  
|-  
|
|
''rpsL185''(strR)
''rpsL24''(strR)
|
|


Line 1,698: Line 1,755:


|
|
[[cgscmutation:9848|CGSC:9848]]
[[cgscmutation:9606|CGSC:9606]]
|
|
   
   
|-  
|-  
|
|
''rpsL260''(strR)
''rpsL281''(strR)
|
|


Line 1,715: Line 1,772:


|
|
[[cgscmutation:9860|CGSC:9860]]
[[cgscmutation:9729|CGSC:9729]]
|
|
   
   
|-  
|-  
|
|
''rpsL154''(strR)
''rpsL263''(strR)
|
|


Line 1,732: Line 1,789:


|
|
[[cgscmutation:9873|CGSC:9873]]
[[cgscmutation:9830|CGSC:9830]]
|
|
   
   
|-  
|-  
|
|
''rpsL120''(strR)
''rpsL185''(strR)
|
|


Line 1,749: Line 1,806:


|
|
[[cgscmutation:10167|CGSC:10167]]
[[cgscmutation:9848|CGSC:9848]]
|
|
   
   
|-  
|-  
|
|
''rpsL264''(strR)
''rpsL260''(strR)
|
|


Line 1,766: Line 1,823:


|
|
[[cgscmutation:10251|CGSC:10251]]
[[cgscmutation:9860|CGSC:9860]]
|
|
   
   
|-  
|-  
|
|
''rpsL268''(strR)
''rpsL154''(strR)
|
|


Line 1,783: Line 1,840:


|
|
[[cgscmutation:10815|CGSC:10815]]
[[cgscmutation:9873|CGSC:9873]]
|
|
   
   
|-  
|-  
|
|
''rpsL127''(strR)
''rpsL120''(strR)
|
|


Line 1,800: Line 1,857:


|
|
[[cgscmutation:11128|CGSC:11128]]
[[cgscmutation:10167|CGSC:10167]]
|
|
   
   
|-  
|-  
|
|
''rpsL16''(strR)
''rpsL264''(strR)
|
|


Line 1,817: Line 1,874:


|
|
[[cgscmutation:11152|CGSC:11152]]
[[cgscmutation:10251|CGSC:10251]]
|
|
   
   
|-  
|-  
|
|
''rpsL712''(strR)
''rpsL268''(strR)
|
|


Line 1,834: Line 1,891:


|
|
[[cgscmutation:11323|CGSC:11323]]
[[cgscmutation:10815|CGSC:10815]]
|
|
   
   
|-  
|-  
|
|
''rpsL60''(strR)
''rpsL127''(strR)
|
|


Line 1,851: Line 1,908:


|
|
[[cgscmutation:11361|CGSC:11361]]
[[cgscmutation:11128|CGSC:11128]]
|
|
   
   
|-  
|-  
|
|
''rpsL106''(strR)
''rpsL16''(strR)
|
|


Line 1,868: Line 1,925:


|
|
[[cgscmutation:11512|CGSC:11512]]
[[cgscmutation:11152|CGSC:11152]]
|
|
   
   
|-  
|-  
|
|
''rpsL123''(strR)
''rpsL712''(strR)
|
|


Line 1,885: Line 1,942:


|
|
[[cgscmutation:11573|CGSC:11573]]
[[cgscmutation:11323|CGSC:11323]]
|
|
   
   
|-  
|-  
|
|
''rpsL144''(strR)
''rpsL60''(strR)
|
|


Line 1,902: Line 1,959:


|
|
[[cgscmutation:11592|CGSC:11592]]
[[cgscmutation:11361|CGSC:11361]]
|
|
   
   
|-  
|-  
|
|
''rpsL183''(strR)
''rpsL106''(strR)
|
|


Line 1,919: Line 1,976:


|
|
[[cgscmutation:11845|CGSC:11845]]
[[cgscmutation:11512|CGSC:11512]]
|
|
   
   
|-  
|-  
|
|
''rpsL133''(strR)
''rpsL123''(strR)
|
|


Line 1,936: Line 1,993:


|
|
[[cgscmutation:11867|CGSC:11867]]
[[cgscmutation:11573|CGSC:11573]]
|
|
   
   
|-  
|-  
|
|
''rpsL229''(strR)
''rpsL144''(strR)
|
|


Line 1,953: Line 2,010:


|
|
[[cgscmutation:11911|CGSC:11911]]
[[cgscmutation:11592|CGSC:11592]]
|
|
   
   
|-  
|-  
|
|
''rpsL227''(strR)
''rpsL183''(strR)
|
|


Line 1,970: Line 2,027:


|
|
[[cgscmutation:12062|CGSC:12062]]
[[cgscmutation:11845|CGSC:11845]]
|
|
   
   
|-  
|-  
|
|
''rpsL218''(strR)
''rpsL133''(strR)
|
|


Line 1,987: Line 2,044:


|
|
[[cgscmutation:12069|CGSC:12069]]
[[cgscmutation:11867|CGSC:11867]]
|
|
   
   
|-  
|-  
|
|
''rpsL217''(strR)
''rpsL229''(strR)
|
|


Line 2,004: Line 2,061:


|
|
[[cgscmutation:12072|CGSC:12072]]
[[cgscmutation:11911|CGSC:11911]]
|
|
   
   
|-  
|-  
|
|
''rpsL253''(strR)
''rpsL227''(strR)
|
|


Line 2,021: Line 2,078:


|
|
[[cgscmutation:12147|CGSC:12147]]
[[cgscmutation:12062|CGSC:12062]]
|
|
   
   
|-  
|-  
|
|
''rpsL272''(strR)
''rpsL218''(strR)
|
|


Line 2,038: Line 2,095:


|
|
[[cgscmutation:12213|CGSC:12213]]
[[cgscmutation:12069|CGSC:12069]]
|
|
   
   
|-  
|-  
|
|
''rpsL275''(strR)
''rpsL217''(strR)
|
|


Line 2,055: Line 2,112:


|
|
[[cgscmutation:12892|CGSC:12892]]
[[cgscmutation:12072|CGSC:12072]]
|
|
   
   
|-  
|-  
|
|
''rpsL252''(strR)
''rpsL253''(strR)
|
|


Line 2,072: Line 2,129:


|
|
[[cgscmutation:13113|CGSC:13113]]
[[cgscmutation:12147|CGSC:12147]]
|
|
   
   
|-  
|-  
|
|
''rpsL18''(strR)
''rpsL272''(strR)
|
|


Line 2,089: Line 2,146:


|
|
[[cgscmutation:13175|CGSC:13175]]
[[cgscmutation:12213|CGSC:12213]]
|
|
   
   
|-  
|-  
|
|
''rpsL38''(strR)
''rpsL275''(strR)
|
|


Line 2,106: Line 2,163:


|
|
[[cgscmutation:13182|CGSC:13182]]
[[cgscmutation:12892|CGSC:12892]]
|
|
   
   
|-  
|-  
|
|
''rpsL23''(strR)
''rpsL252''(strR)
|
|


Line 2,123: Line 2,180:


|
|
[[cgscmutation:13214|CGSC:13214]]
[[cgscmutation:13113|CGSC:13113]]
|
|
   
   
|-  
|-  
|
|
''rpsL112''(strR)
''rpsL18''(strR)
|
|


Line 2,140: Line 2,197:


|
|
[[cgscmutation:13220|CGSC:13220]]
[[cgscmutation:13175|CGSC:13175]]
|
|
   
   
|-  
|-  
|
|
''rpsL40''
''rpsL38''(strR)
|
|


Line 2,153: Line 2,210:


|
|
 
streptomycin resistant
|
|


|
|
[[cgscmutation:13289|CGSC:13289]]
[[cgscmutation:13182|CGSC:13182]]
|
|
   
   
|-  
|-  
|
|
''rpsL30''(strR)
''rpsL23''(strR)
|
|


Line 2,174: Line 2,231:


|
|
[[cgscmutation:13291|CGSC:13291]]
[[cgscmutation:13214|CGSC:13214]]
|
|
   
   
|-  
|-  
|
|
''rpsL33''(strR)
''rpsL112''(strR)
|
|


Line 2,191: Line 2,248:


|
|
[[cgscmutation:13780|CGSC:13780]]
[[cgscmutation:13220|CGSC:13220]]
|
|
   
   
|-  
|-  
|
|
''rpsL114''(strR)
''rpsL40''
|
|


Line 2,204: Line 2,261:


|
|
streptomycin resistant
 
|
|


|
|
[[cgscmutation:13834|CGSC:13834]]
[[cgscmutation:13289|CGSC:13289]]
|
|
   
   
|-  
|-  
|
|
''rpsL12''(strR)
''rpsL30''(strR)
|
|


Line 2,225: Line 2,282:


|
|
[[cgscmutation:14003|CGSC:14003]]
[[cgscmutation:13291|CGSC:13291]]
|
|
   
   
|-  
|-  
|
|
''rpsL143''(strR)
''rpsL33''(strR)
|
|


Line 2,242: Line 2,299:


|
|
[[cgscmutation:14036|CGSC:14036]]
[[cgscmutation:13780|CGSC:13780]]
|
|
   
   
|-  
|-  
|
|
''rpsL102''(strR)
''rpsL114''(strR)
|
|


Line 2,259: Line 2,316:


|
|
[[cgscmutation:14114|CGSC:14114]]
[[cgscmutation:13834|CGSC:13834]]
|
|
   
   
|-  
|-  
|
|
''rpsL119''(strR)
''rpsL12''(strR)
|
|


Line 2,276: Line 2,333:


|
|
[[cgscmutation:14128|CGSC:14128]]
[[cgscmutation:14003|CGSC:14003]]
|
|
   
   
|-  
|-  
|
|
''rpsL137''(strR)
''rpsL143''(strR)
|
|


Line 2,293: Line 2,350:


|
|
[[cgscmutation:14243|CGSC:14243]]
[[cgscmutation:14036|CGSC:14036]]
|
|
   
   
|-  
|-  
|
|
''rpsL139''(strR)
''rpsL102''(strR)
|
|


Line 2,310: Line 2,367:


|
|
[[cgscmutation:14252|CGSC:14252]]
[[cgscmutation:14114|CGSC:14114]]
|
|
   
   
|-  
|-  
|
|
''rpsL256''(strR)
''rpsL119''(strR)
|
|


Line 2,327: Line 2,384:


|
|
[[cgscmutation:14300|CGSC:14300]]
[[cgscmutation:14128|CGSC:14128]]
|
|
   
   
|-  
|-  
|
|
''rpsL184''(strR)
''rpsL137''(strR)
|
|


Line 2,344: Line 2,401:


|
|
[[cgscmutation:14417|CGSC:14417]]
[[cgscmutation:14243|CGSC:14243]]
|
|
   
   
|-  
|-  
|
|
''rpsL176''(strR)
''rpsL139''(strR)
|
|


Line 2,361: Line 2,418:


|
|
[[cgscmutation:14482|CGSC:14482]]
[[cgscmutation:14252|CGSC:14252]]
|
|
   
   
|-  
|-  
|
|
''rpsL199''(strR)
''rpsL256''(strR)
|
|


Line 2,378: Line 2,435:


|
|
[[cgscmutation:14508|CGSC:14508]]
[[cgscmutation:14300|CGSC:14300]]
|
|
   
   
|-  
|-  
|
|
''rpsL262''(strR)
''rpsL184''(strR)
|
|


Line 2,395: Line 2,452:


|
|
[[cgscmutation:15829|CGSC:15829]]
[[cgscmutation:14417|CGSC:14417]]
|
|
   
   
|-  
|-  
|
|
''rpsL58''(strR)
''rpsL176''(strR)
|
|


Line 2,412: Line 2,469:


|
|
[[cgscmutation:16044|CGSC:16044]]
[[cgscmutation:14482|CGSC:14482]]
|
|
   
   
|-  
|-  
|
|
''rpsL90''(strR)
''rpsL199''(strR)
|
|


Line 2,429: Line 2,486:


|
|
[[cgscmutation:16625|CGSC:16625]]
[[cgscmutation:14508|CGSC:14508]]
|
|
   
   
|-  
|-  
|
|
''rpsL219''(strR)
''rpsL262''(strR)
|
|


Line 2,446: Line 2,503:


|
|
[[cgscmutation:16722|CGSC:16722]]
[[cgscmutation:15829|CGSC:15829]]
|
|
   
   
|-  
|-  
|
|
''rpsL61''(strR)
''rpsL58''(strR)
|
|


Line 2,463: Line 2,520:


|
|
[[cgscmutation:16762|CGSC:16762]]
[[cgscmutation:16044|CGSC:16044]]
|
|
   
   
|-  
|-  
|
|
''rpsL91''(strR)
''rpsL90''(strR)
|
|


Line 2,480: Line 2,537:


|
|
[[cgscmutation:16771|CGSC:16771]]
[[cgscmutation:16625|CGSC:16625]]
|
|
   
   
|-  
|-  
|
|
''rpsL93''(strR)
''rpsL219''(strR)
|
|


Line 2,497: Line 2,554:


|
|
[[cgscmutation:16844|CGSC:16844]]
[[cgscmutation:16722|CGSC:16722]]
|
|
   
   
|-  
|-  
|
|
''rpsL94''(strR)
''rpsL61''(strR)
|
|


Line 2,514: Line 2,571:


|
|
[[cgscmutation:16848|CGSC:16848]]
[[cgscmutation:16762|CGSC:16762]]
|
|
   
   
|-  
|-  
|
|
''rpsL95''(strR)
''rpsL91''(strR)
|
|


Line 2,531: Line 2,588:


|
|
[[cgscmutation:16853|CGSC:16853]]
[[cgscmutation:16771|CGSC:16771]]
|
|
   
   
|-  
|-  
|
|
''rpsL128''(strR)
''rpsL93''(strR)
|
|


Line 2,548: Line 2,605:


|
|
[[cgscmutation:16891|CGSC:16891]]
[[cgscmutation:16844|CGSC:16844]]
|
|
   
   
|-  
|-  
|
|
''rpsL215''(strR)
''rpsL94''(strR)
|
|


Line 2,565: Line 2,622:


|
|
[[cgscmutation:17217|CGSC:17217]]
[[cgscmutation:16848|CGSC:16848]]
|
|
   
   
|-  
|-  
|
|
''rpsL221''(strR)
''rpsL95''(strR)
|
|


Line 2,582: Line 2,639:


|
|
[[cgscmutation:17223|CGSC:17223]]
[[cgscmutation:16853|CGSC:16853]]
|
|
   
   
|-  
|-  
|
|
''rpsL222''(strR)
''rpsL128''(strR)
|
|


Line 2,599: Line 2,656:


|
|
[[cgscmutation:17225|CGSC:17225]]
[[cgscmutation:16891|CGSC:16891]]
|
|
   
   
|-  
|-  
|
|
''rpsL224''(strR)
''rpsL215''(strR)
|
|


Line 2,616: Line 2,673:


|
|
[[cgscmutation:17227|CGSC:17227]]
[[cgscmutation:17217|CGSC:17217]]
|
|
   
   
|-  
|-  
|
|
''rpsL226''(strR)
''rpsL221''(strR)
|
|


Line 2,633: Line 2,690:


|
|
[[cgscmutation:17229|CGSC:17229]]
[[cgscmutation:17223|CGSC:17223]]
|
|
   
   
|-  
|-  
|
|
''rpsL290''(strR)
''rpsL222''(strR)
|
|


Line 2,650: Line 2,707:


|
|
[[cgscmutation:19344|CGSC:19344]]
[[cgscmutation:17225|CGSC:17225]]
|
|
   
   
|-  
|-  
|
|
''rpsL267''(strR)
''rpsL224''(strR)
|
|


Line 2,667: Line 2,724:


|
|
[[cgscmutation:27040|CGSC:27040]]
[[cgscmutation:17227|CGSC:17227]]
|
|
   
   
|-  
|-  
|
|
''rpsL321''
''rpsL226''(strR)
|
|


Line 2,680: Line 2,737:


|
|
 
streptomycin resistant
|
|


|
|
[[cgscmutation:66484|CGSC:66484]]
[[cgscmutation:17229|CGSC:17229]]
|
|
   
   
|-  
|-  
|
|
''rpsL286''
''rpsL290''(strR)
|
|


Line 2,697: Line 2,754:


|
|
 
streptomycin resistant
|
|


|
|
[[cgscmutation:81241|CGSC:81241]]
[[cgscmutation:19344|CGSC:19344]]
|
|
   
   
|-  
|-  
|
|
''rpsL9''
''rpsL267''(strR)
|
|


Line 2,714: Line 2,771:


|
|
 
streptomycin resistant
|
|


|
|
[[cgscmutation:85704|CGSC:85704]]
[[cgscmutation:27040|CGSC:27040]]
|
|
   
   
|-
|
''rpsL321''
|
|


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|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.17233.D46a9f38c7bb13-->


<protect><!--Alleles_notes--></protect>
|
===Notes===


|
|
[[cgscmutation:66484|CGSC:66484]]
|
|-
|
''rpsL286''
|
|
|
|
|
|
[[cgscmutation:81241|CGSC:81241]]
|
|-
|
''rpsL9''
|
|
|
|
|
|
[[cgscmutation:85704|CGSC:85704]]
|
|-
|
Sm<sup>R</sup> in UK325
|
Streptomycin resistance was introduced to protein S12 (''rpsL'')
|
|
Sensitivity to
|
Altered activity toward Dimethyl Sulfate at position A908
|
PMID:2477554
|
|
Mutation also in strains Uk326, UK327 & UK235. See figure 2a. 
|-
|
''rpsL4'' Sm<sup>D</sup> in EB30
|
Streptomycin dependence was introduced into protein S12.
|
|
Sensitivity to
|
Reduced sensitivity toward DMS at positions A908 and A909
|
PMID:2477554
|
|
See figure 2A
|-
|
''rpsL4'' Sm<sup>D</sup> in EB30
|
Addition of Sm<sup>D</sup> into the S12 gene
|
|
Sensitivity to
|
After the addition of Sm<sup>D</sup> there is reduced reactivity toward dimethyl sulfate at position A1413
|
PMID:2477554
|
|
See Figure 2b
|-
|
''rpsL4'' Sm<sup>D</sup> in EB30
|
Introduction of Sm<sup>D</sup> into protein S12
|
|
Sensitivity to
|
Reduced reactivity toward kethoxal at position G1487 after the introduction of Sm<sup>D</sup>
|
PMID:2477224
|
|
See Figure 2C
|-
|
''rpsL''1''rpsD''2
|
Insertion of Sm<sup>I</sup> into the ''rpsL'' and ''rpsD'' alleles
|
|
Sensitivity to
|
Insertion of streptomycin independence into both the rpsL and rpsD induced significantly greater reactivity with DMS at position A26.
|
PMID:2477554
|
|
See Figure 1 for the Autoradiograph
|-
|
''rpsL''1, ''rpsD''4
|
Insertion of Sm<sup>I</sup> into the ''rpsL'' and ''rpsD'' alleles
|
|
Sensitivity to
|
Insertion of streptomycin independence into both the rpsL and rpsD induced significantly greater reactivity with DMS at position A8.
|
PMID:2477554
|
|
See Figure 1 for the Autoradiograph
|-
|
''glnV44'' ''rpsL-asuB3''
|
Insertion of anti-suppressor genes.
|
|
Suppressor efficiency
|
Decrease in suppressor efficiency
|
PMID:3918006
|
|
See table 5 for results of suppressor efficiency test. 
|-
|
''spcA strA''
|
|
|
Resistant to
|
Resistant to Neamine
|
PMID:58966
|
Strain:KMBL-146
|
Table 4 results are traceable references here <ref name='PMID:765735'/> 
|-
|
''rpsE-nea319 rpsL-nea319''
|
|
Arg to Ser in Peptide T2
<ref name = 'PMID:765736' />
Pro to Leu in peptide T15
<ref name = 'PMID:765736' />
|
Resistant to
|
resistance to neamine
|
PMID:765736
|
|
See Figure 7 for analysis of double mutation 
|- class="tableEdit_footer"
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|}
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<protect><!--Alleles_notes--></protect>
===Notes===
==Genetic Interactions==
{{BacktoTop}}
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.17233.A4e04c30f90edc-->
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="A4e04c30f90edc"  class=" tableEdit Genetic_interaction_table dataTable" 
|- {{table_heading_style}}
!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.17233.A4e04c30f90edc&page=17233&pagename={{FULLPAGENAMEE}}&type=0&template=Genetic_interaction_table edit table]</span> || || || || || ||
|}
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.17233.A4e04c30f90edc--></protect>
<!-- Genetic Interacdtions Notes -->
===Notes===


==Genetic Resources==
==Genetic Resources==
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.17233.A46a9f38d3c824-->
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*  
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****************************************************************************************** -->{{Gene_resources_help}}
{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="A46a9f38d3c824"  class=" tableEdit Gene_resource_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Resource!!Resource Type!!Source!!Notes/Reference
!|Resource!!Resource Type!!Source!!Notes/Reference
|-
|
JW3304
|
Plasmid clone
|
[http://www.shigen.nig.ac.jp/ecoli/strain/askaCloneQueryAction.do?strainTypeId=9 Shigen]
|
PMID:16769691
 
Status:Clone OK
 
Primer 1:GCCGCAACAGTTAACCAGCTGGT
 
Primer 2:CCAGCCTTAGGACGCTTCACGCC
|-  
|-  
|
|
JW3304
[[:Category:Kohara_Phage:3F8|3F8]]
|
|
Plasmid clone
Kohara Phage
|
|
[http://www.shigen.nig.ac.jp/ecoli/strain/askaCloneQueryAction.do?strainTypeId=9 Shigen]
[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=626 Genobase]
|
|
PMID:16769691
PMID:3038334
 
Status:Clone OK
 
Primer 1:GCCGCAACAGTTAACCAGCTGGT
 
Primer 2:CCAGCCTTAGGACGCTTCACGCC
|-  
|-  
|
|
Line 2,779: Line 3,075:
Synonyms:zhe-3084::Tn10nnnCAG18456 also carries cysG0 (CGSC).  
Synonyms:zhe-3084::Tn10nnnCAG18456 also carries cysG0 (CGSC).  


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|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-  
|-  
|
|
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
[[EcoCyc]]
|
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10911 EcoCyc:EG10911]
|
|-
|
[http://www.ecoli-york.org EchoBASE] ([[EchoBASE|EcoliWiki Page]])
|
[http://www.york.ac.uk/res/thomas/Gene.cfm?recordID=EB0904 EchoBASE:EB0904]
|
|-
|
[http://chase.ou.edu/oubcf/index.php EcoliGenExpDB] ([[EcoliGenExpDB|EcoliWiki Page]])
|
|
[http://chase.ou.edu/macro/searchlink.php?bnum=b3342 EcoliGenExpDB:b3342]
EcoCyc:EG10911
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://BioCyc.org/ECOL199310/ ECOL199310CYC] ([[ECOL199310CYC|EcoliWiki Page]])
[[EcoGene]]
|
|
[http://BioCyc.org/ECOL199310/new-image?object=C4116 ECOL199310CYC:C4116]
EcoGene:EG10911
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://ecogene.org EcoGene] ([[EcoGene|EcoliWiki Page]])
[[RegulonDB]]
|
|
[http://ecogene.org/geneinfo.php?eg_id=EG10911 EcoGene:EG10911]
RegulonDB:ECK120000902
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[http://BioCyc.org/ECOO157/ ECOO157CYC] ([[ECOO157CYC|EcoliWiki Page]])  
[http://www.ncbi.nlm.nih.gov/gene NCBI] ([[NCBI|EcoliWiki Page]])
|
|
[http://BioCyc.org/ECOO157/new-image?object=RPSL ECOO157CYC:RPSL]
[http://www.ncbi.nlm.nih.gov/gene?term=947845 GeneID:947845]
|
|
Escherichia coli str. K-12 substr. MG1655
|-  
|-  
|
|
[http://cgsc.biology.yale.edu CGSC] ([[CGSC|EcoliWiki Page]])
[[EchoBASE]]
|
|
[http://cgsc.biology.yale.edu/cgi-bin/sybgw/cgsc/Site/220 CGSC:220]
EchoBASE:EB0904
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|-  
|
|
[https://asap.ahabs.wisc.edu/asap/logon.php ASAP] ([[ASAP|EcoliWikiPage]])
[[ASAP]]
|
|
[http://asap.ahabs.wisc.edu/asap/feature_info.php?LocationID=WIS&FeatureID=0010919&formSubmitReturn=1 ASAP:ABE-0010919]
ASAP:ABE-0010919
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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!|Name!!URL!!Comments


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[[Category:Genes not in the Keio knockout collection]]
[[Category:Genes not in the Keio knockout collection]]
[[Category:Genes in the ASKA clone collection]]
[[Category:Genes in the ASKA clone collection]]
[[Category:rps genes]]
[[Category:rps genes]][[Category:Gene_List:REL606]]
[[Category:Gene_List:BW2952]]

Latest revision as of 20:47, 19 September 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

rpsL

Mnemonic

Ribosomal protein, small

Synonyms

ECK3329, b3342, JW3304, asuB, strA[1], strA

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Notes

Location(s) and DNA Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

74.84 minutes 

MG1655: 3472574..3472200
<gbrowseImage> name=NC_000913:3472200..3472574 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 3402457..3402083
<gbrowseImage> name=NC_012967:3402083..3402457 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 3359357..3359731
<gbrowseImage> name=NC_012759:3359357..3359731 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 4165864..4166238
<gbrowseImage> name=NC_007779:4165864..4166238 source=W3110 preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

Coding Start (SO:0000323)

MG1655

3472203

Edman degradation

PMID:320034[2]


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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

Strain DH10B

K43R

Nonsynonomous mutation

PMID:18245285[3]

ASAP

This is a SNP in E. coli K-12 Strain DH10B

rpsLK43R

K43R

(confers streptomycin resistance but not hyperaccurate translation)

Strain variation; seeded from UniProt:P0A7S3

rpsLL57H

L57H

Protein is not incorporated into ribosomes

seeded from UniProt:P0A7S3

rpsLK88Q

K88Q

Confers low-level resistance to streptomycin and a 15% decrease in the translational elongation rate

seeded from UniProt:P0A7S3

rpsL136(strR)

streptomycin resistant

CGSC:4522

rpsL31(strR)

streptomycin resistant

CGSC:4510

rpsL8

CGSC:4650

rpsL118(strR)

streptomycin resistant

CGSC:4748

rpsL200(strR)

streptomycin resistant

CGSC:4764

rpsL104

CGSC:4888

rpsL109(strR)

streptomycin resistant

CGSC:4933

rpsL151(strR)

streptomycin resistant

CGSC:5028

rpsL195(strR)

streptomycin resistant

CGSC:5051

rpsL134(strR)

streptomycin resistant

CGSC:5092

rpsL175(strR)

streptomycin resistant

CGSC:5097

rpsL153(strR)

streptomycin resistant

CGSC:5174

rpsL67(strR)

streptomycin resistant

CGSC:5230

rpsL135(strR)

streptomycin resistant

CGSC:5280

rpsL125(strR)

streptomycin resistant

CGSC:5300

rpsL155(strR)

streptomycin resistant

CGSC:5385

rpsL150(strR)

streptomycin resistant

CGSC:5414

rpsL100(strR)

streptomycin resistant

CGSC:5475

rpsL181(strR)

streptomycin resistant

CGSC:5536

rpsL178(strR)

streptomycin resistant

CGSC:5550

rpsL172(strR)

streptomycin resistant

CGSC:5578

rpsL173(strR)

streptomycin resistant

CGSC:5587

rpsL223(strR)

streptomycin resistant

CGSC:5720

rpsL129(strR)

streptomycin resistant

CGSC:5773

rpsL99(strR)

streptomycin resistant

CGSC:5785

rpsL14

CGSC:5791

rpsL700(strR)

streptomycin resistant

CGSC:5803

rpsL97(strR)

streptomycin resistant

CGSC:5834

rpsL78(strR)

streptomycin resistant

CGSC:5940

rpsL39(StrD)

streptomycin dependent

CGSC:5991

rpsL101(strR)

streptomycin resistant

CGSC:6009

rpsL45(strR)

streptomycin resistant

CGSC:6053

rpsL265(strR)

streptomycin resistant

CGSC:6113

rpsL704(strR)

streptomycin resistant

CGSC:6176

rpsL186(strR)

streptomycin resistant

CGSC:6191

rpsL17

CGSC:6221

rpsL198(strR)

streptomycin resistant

CGSC:6284

rpsL197(strR)

streptomycin resistant

CGSC:6295

rpsL179(strR)

streptomycin resistant

CGSC:6334

rpsL117(strR)

streptomycin resistant

CGSC:6364

rpsL126(strR)

streptomycin resistant

CGSC:6369

rpsL25(strR)

streptomycin resistant

CGSC:6532

rpsL196(strR)

streptomycin resistant

CGSC:6542

rpsL213(strR)

streptomycin resistant

CGSC:6638

rpsL212(strR)

streptomycin resistant

PMID:1089639[4] PMID:1094452[5]

CGSC:6642

rpsL124(strR)

streptomycin resistant

CGSC:6646

rpsL214(strR)

streptomycin resistant

CGSC:6650

rpsL228(strR)

streptomycin resistant

CGSC:6694

rpsL231(strR)

streptomycin resistant

CGSC:6741

rpsL999(strR)

streptomycin resistant

CGSC:6885

rpsL254(strR)

streptomycin resistant

CGSC:6967

rpsL255

CGSC:7010

rpsL261(strR)

streptomycin resistant

CGSC:7047

rpsL35(strR)

streptomycin resistant

CGSC:7214

rpsL146(strR)

streptomycin resistant

CGSC:7262

rpsL110(strR)

streptomycin resistant

CGSC:7303

rpsL145(strR)

streptomycin resistant

CGSC:7333

rpsL257(strR)

streptomycin resistant

CGSC:7347

rpsL284(strR)

streptomycin resistant

CGSC:7560

rpsL283(strR)

streptomycin resistant

CGSC:7566

rpsL180(strR)

streptomycin resistant

CGSC:7620

rpsL182(strR)

streptomycin resistant

CGSC:7730

rpsL204(strR)

streptomycin resistant

CGSC:7734

[rpsL203](strR)

streptomycin resistant

CGSC:7741

rpsL160(strR)

streptomycin resistant

CGSC:7844

rpsL140(strR)

streptomycin resistant

CGSC:7859

rpsL149(strR)

streptomycin resistant

CGSC:7933

rpsL157(strR)

streptomycin resistant

CGSC:8004

rpsL115(strR)

streptomycin resistant

CGSC:8089

rpsL20(strR)

streptomycin resistant

CGSC:8208

rpsL62(strR)

streptomycin resistant

CGSC:8248

rpsL201(strR)

streptomycin resistant

CGSC:8302

rpsL192(strR)

streptomycin resistant

CGSC:8303

rpsL190(strR)

streptomycin resistant

CGSC:8304

rpsL194(strR)

streptomycin resistant

CGSC:8305

rpsL193(strR)

streptomycin resistant

CGSC:8306

rpsL56(strR)

streptomycin resistant

CGSC:8334

rpsL171(strR)

streptomycin resistant

CGSC:8424

rpsL230(strR)

streptomycin resistant

CGSC:8538

rpsL273(strR)

streptomycin resistant

CGSC:8781

rpsL132(strR)

streptomycin resistant

CGSC:8811

rpsL174(strR)

streptomycin resistant

CGSC:8902

rpsL159(strR)

streptomycin resistant

CGSC:9102

rpsL27(strR)

streptomycin resistant

CGSC:9123

rpsL138(strR)

streptomycin resistant

CGSC:9352

rpsL69(strR)

streptomycin resistant

CGSC:9428

rpsL71(strR)

streptomycin resistant

CGSC:9433

rpsL24(strR)

streptomycin resistant

CGSC:9606

rpsL281(strR)

streptomycin resistant

CGSC:9729

rpsL263(strR)

streptomycin resistant

CGSC:9830

rpsL185(strR)

streptomycin resistant

CGSC:9848

rpsL260(strR)

streptomycin resistant

CGSC:9860

rpsL154(strR)

streptomycin resistant

CGSC:9873

rpsL120(strR)

streptomycin resistant

CGSC:10167

rpsL264(strR)

streptomycin resistant

CGSC:10251

rpsL268(strR)

streptomycin resistant

CGSC:10815

rpsL127(strR)

streptomycin resistant

CGSC:11128

rpsL16(strR)

streptomycin resistant

CGSC:11152

rpsL712(strR)

streptomycin resistant

CGSC:11323

rpsL60(strR)

streptomycin resistant

CGSC:11361

rpsL106(strR)

streptomycin resistant

CGSC:11512

rpsL123(strR)

streptomycin resistant

CGSC:11573

rpsL144(strR)

streptomycin resistant

CGSC:11592

rpsL183(strR)

streptomycin resistant

CGSC:11845

rpsL133(strR)

streptomycin resistant

CGSC:11867

rpsL229(strR)

streptomycin resistant

CGSC:11911

rpsL227(strR)

streptomycin resistant

CGSC:12062

rpsL218(strR)

streptomycin resistant

CGSC:12069

rpsL217(strR)

streptomycin resistant

CGSC:12072

rpsL253(strR)

streptomycin resistant

CGSC:12147

rpsL272(strR)

streptomycin resistant

CGSC:12213

rpsL275(strR)

streptomycin resistant

CGSC:12892

rpsL252(strR)

streptomycin resistant

CGSC:13113

rpsL18(strR)

streptomycin resistant

CGSC:13175

rpsL38(strR)

streptomycin resistant

CGSC:13182

rpsL23(strR)

streptomycin resistant

CGSC:13214

rpsL112(strR)

streptomycin resistant

CGSC:13220

rpsL40

CGSC:13289

rpsL30(strR)

streptomycin resistant

CGSC:13291

rpsL33(strR)

streptomycin resistant

CGSC:13780

rpsL114(strR)

streptomycin resistant

CGSC:13834

rpsL12(strR)

streptomycin resistant

CGSC:14003

rpsL143(strR)

streptomycin resistant

CGSC:14036

rpsL102(strR)

streptomycin resistant

CGSC:14114

rpsL119(strR)

streptomycin resistant

CGSC:14128

rpsL137(strR)

streptomycin resistant

CGSC:14243

rpsL139(strR)

streptomycin resistant

CGSC:14252

rpsL256(strR)

streptomycin resistant

CGSC:14300

rpsL184(strR)

streptomycin resistant

CGSC:14417

rpsL176(strR)

streptomycin resistant

CGSC:14482

rpsL199(strR)

streptomycin resistant

CGSC:14508

rpsL262(strR)

streptomycin resistant

CGSC:15829

rpsL58(strR)

streptomycin resistant

CGSC:16044

rpsL90(strR)

streptomycin resistant

CGSC:16625

rpsL219(strR)

streptomycin resistant

CGSC:16722

rpsL61(strR)

streptomycin resistant

CGSC:16762

rpsL91(strR)

streptomycin resistant

CGSC:16771

rpsL93(strR)

streptomycin resistant

CGSC:16844

rpsL94(strR)

streptomycin resistant

CGSC:16848

rpsL95(strR)

streptomycin resistant

CGSC:16853

rpsL128(strR)

streptomycin resistant

CGSC:16891

rpsL215(strR)

streptomycin resistant

CGSC:17217

rpsL221(strR)

streptomycin resistant

CGSC:17223

rpsL222(strR)

streptomycin resistant

CGSC:17225

rpsL224(strR)

streptomycin resistant

CGSC:17227

rpsL226(strR)

streptomycin resistant

CGSC:17229

rpsL290(strR)

streptomycin resistant

CGSC:19344

rpsL267(strR)

streptomycin resistant

CGSC:27040

rpsL321

CGSC:66484

rpsL286

CGSC:81241

rpsL9

CGSC:85704

SmR in UK325

Streptomycin resistance was introduced to protein S12 (rpsL)

Sensitivity to

Altered activity toward Dimethyl Sulfate at position A908

PMID:2477554[6]

Mutation also in strains Uk326, UK327 & UK235. See figure 2a.

rpsL4 SmD in EB30

Streptomycin dependence was introduced into protein S12.

Sensitivity to

Reduced sensitivity toward DMS at positions A908 and A909

PMID:2477554[6]

See figure 2A

rpsL4 SmD in EB30

Addition of SmD into the S12 gene

Sensitivity to

After the addition of SmD there is reduced reactivity toward dimethyl sulfate at position A1413

PMID:2477554[6]

See Figure 2b

rpsL4 SmD in EB30

Introduction of SmD into protein S12

Sensitivity to

Reduced reactivity toward kethoxal at position G1487 after the introduction of SmD

PMID:2477224[7]

See Figure 2C

rpsL1rpsD2

Insertion of SmI into the rpsL and rpsD alleles

Sensitivity to

Insertion of streptomycin independence into both the rpsL and rpsD induced significantly greater reactivity with DMS at position A26.

PMID:2477554[6]

See Figure 1 for the Autoradiograph

rpsL1, rpsD4

Insertion of SmI into the rpsL and rpsD alleles

Sensitivity to

Insertion of streptomycin independence into both the rpsL and rpsD induced significantly greater reactivity with DMS at position A8.

PMID:2477554[6]

See Figure 1 for the Autoradiograph

glnV44 rpsL-asuB3

Insertion of anti-suppressor genes.

Suppressor efficiency

Decrease in suppressor efficiency

PMID:3918006[8]

See table 5 for results of suppressor efficiency test.

spcA strA

Resistant to

Resistant to Neamine

PMID:58966[9]

Strain:KMBL-146

Table 4 results are traceable references here [10]

rpsE-nea319 rpsL-nea319

Arg to Ser in Peptide T2 [11] Pro to Leu in peptide T15 [11]

Resistant to

resistance to neamine

PMID:765736[11]

See Figure 7 for analysis of double mutation

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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW3304

Plasmid clone

Shigen

PMID:16769691[12]

Status:Clone OK

Primer 1:GCCGCAACAGTTAACCAGCTGGT

Primer 2:CCAGCCTTAGGACGCTTCACGCC

3F8

Kohara Phage

Genobase

PMID:3038334[13]

smg-3082::Tn10

Linked marker

CAG12071 = CGSC7444[14]

est. P1 cotransduction: 15% [15]
Synonyms:zhb-3082::Tn10, zhd-3082::Tn10

zhf-3084::Tn10

Linked marker

CAG18456 = CGSC7576[14]

est. P1 cotransduction: 30% [15]
Synonyms:zhe-3084::Tn10nnnCAG18456 also carries cysG0 (CGSC).

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10911

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10911

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000902

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:947845

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0904

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010919

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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<protect>

References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ Funatsu, G et al. (1977) Primary stucture of protein S12 from the small Escherichia coli ribosomal subunit. FEBS Lett. 73 12-7 PubMed
  3. ↑ Durfee, T et al. (2008) The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse. J. Bacteriol. 190 2597-606 PubMed
  4. ↑ Chakrabarti, S & Gorini, L (1975) Growth of bacteriophages MS2 and T7 on streptomycin-resistant mutants of Escherichia coli. J. Bacteriol. 121 670-4 PubMed
  5. ↑ Chakrabarti, SL & Gorini, L (1975) A link between streptomycin and rifampicin mutation. Proc. Natl. Acad. Sci. U.S.A. 72 2084-7 PubMed
  6. ↑ 6.0 6.1 6.2 6.3 6.4 Allen, PN & Noller, HF (1989) Mutations in ribosomal proteins S4 and S12 influence the higher order structure of 16 S ribosomal RNA. J. Mol. Biol. 208 457-68 PubMed
  7. ↑ Bar, RS et al. (1989) Insulin-like growth factor-binding proteins from vascular endothelial cells: purification, characterization, and intrinsic biological activities. Endocrinology 125 1910-20 PubMed
  8. ↑ Sullivan, MA & Bock, RM (1985) Isolation and characterization of antisuppressor mutations in Escherichia coli. J. Bacteriol. 161 377-84 PubMed
  9. ↑ Bailey, L et al. (1976) An iridovirus from bees. J. Gen. Virol. 31 459-61 PubMed
  10. ↑ De Wilde, M et al. (1975) Cooperative control of translation fidelity by ribosomal proteins in Escherichia coli. I. Properties of ribosomal mutants whose resistance to neamine is the cumulative effect of two distinct mutations. Mol. Gen. Genet. 142 19-33 PubMed
  11. ↑ 11.0 11.1 11.2 Yaguchi, M et al. (1975) Cooperative control of translational fidelity by ribosomal proteins in Escherichia coli. II. Localization of amino acid replacements in proteins S5 and S12 altered in double mutants resistant to neamine. Mol. Gen. Genet. 142 35-43 PubMed
  12. ↑ Kitagawa, M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12 291-9 PubMed
  13. ↑ Kohara, Y et al. (1987) The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell 50 495-508 PubMed
  14. ↑ 14.0 14.1 CGSC: The Coli Genetics Stock Center
  15. ↑ 15.0 15.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

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