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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

Quickview

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Standard Name

gor

Gene Synonym(s)

ECK3485, b3500, JW3467, gorA[1], gorA

Product Desc.

glutathione reductase (NADPH)[2][3];

Component of glutathione reductase[2][3]

Glutathione reductase, NADP+, FAD-binding[4]

Product Synonyms(s)

glutathione oxidoreductase[1], B3500[2][1], GorA[2][1], Gor[2][1], GR[2][1], GRase[2][1], NADPH:oxidized-glutathione oxidoreductase[2][1] , ECK3485, gorA, JW3467, b3500

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gor[2], gorA

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

gor

Mnemonic

GSH oxidoreductase

Synonyms

ECK3485, b3500, JW3467, gorA[1], gorA

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

78.55 minutes 

MG1655: 3644322..3645674
<gbrowseImage> name=NC_000913:3644322..3645674 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 3576989..3578341
<gbrowseImage> name=NC_012967:3576989..3578341 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 3532816..3534168
<gbrowseImage> name=NC_012759:3532816..3534168 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 3994116..3992764
<gbrowseImage> name=NC_007779:3992764..3994116 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 3742067..3743419
<gbrowseImage> name=NC_010473:3742067..3743419 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

Δgor (Keio:JW3467)

deletion

deletion

PMID:16738554

Shigen
CGSC10569[5]

gor::Tn5KAN-I-SceI (FB21243)

Insertion at nt 1092 in Minus orientation

PMID:15262929

E. coli Genome Project:FB21243

contains pKD46

gor::Tn5KAN-I-SceI (FB21244)

Insertion at nt 1092 in Minus orientation

PMID:15262929

E. coli Genome Project:FB21244

does not contain pKD46

gor-1(ApR)::Mu c{\rm ts Ap}

CGSC:10651

Δgor-756::kan

PMID:16738554

CGSC:101242


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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes

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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

JW3467

Plasmid clone

Shigen

PMID:16769691

Status:Clone OK

Primer 1:GCCACTAAACACTATGATTACAT

Primer 2:CCACGCATTGTCACGAACTCTTC

4D9

Kohara Phage

Genobase

PMID:3038334

12E4

Kohara Phage

Genobase

PMID:3038334

zhg-50::Tn10

Linked marker

CAG18450 = CGSC7450[5]

est. P1 cotransduction: 8% [6]
Synonyms:zhf-50::Tn10, zhf-5::Tn10

zic-4901::Tn10

Linked marker

CAG18492 = CGSC7457[5]

est. P1 cotransduction: % [6]

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10412

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10412

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000405

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:948014

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0407

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011432

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

Gor

Synonyms

glutathione oxidoreductase[1], B3500[2][1], GorA[2][1], Gor[2][1], GR[2][1], GRase[2][1], NADPH:oxidized-glutathione oxidoreductase[2][1] , ECK3485, gorA, JW3467, b3500

Product description

glutathione reductase (NADPH)[2][3];

Component of glutathione reductase[2][3]

Glutathione reductase, NADP+, FAD-binding[4]

EC number (for enzymes)

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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

GO:0004362

glutathione-disulfide reductase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006322

F

Seeded from EcoCyc (v14.0)

complete

GO:0004362

glutathione-disulfide reductase activity

GOA:spec
GO_REF:0000003

IEA: Inferred from Electronic Annotation

EC:1.8.1.7

F

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004099

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0963

C

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0086

C

Seeded from EcoCyc (v14.0)

complete

GO:0006749

glutathione metabolic process

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006322

P

Seeded from EcoCyc (v14.0)

complete

GO:0016020

membrane

PMID:16858726

IDA: Inferred from Direct Assay

C

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000815

F

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001327

F

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004099

F

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016156

F

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0560

F

Seeded from EcoCyc (v14.0)

complete

GO:0045454

cell redox homeostasis

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004099

P

Seeded from EcoCyc (v14.0)

complete

GO:0050660

FAD binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000815

F

Seeded from EcoCyc (v14.0)

complete

GO:0050660

FAD binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001327

F

Seeded from EcoCyc (v14.0)

complete

GO:0050660

FAD binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004099

F

Seeded from EcoCyc (v14.0)

complete

GO:0050660

FAD binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006322

F

Seeded from EcoCyc (v14.0)

complete

GO:0050660

FAD binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016156

F

Seeded from EcoCyc (v14.0)

complete

GO:0050661

NADP or NADPH binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006322

F

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000815

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001327

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004099

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006322

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016156

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0560

P

Seeded from EcoCyc (v14.0)

complete

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of glutathione reductase

could be indirect

Protein

nadE

PMID:16606699

Experiment(s):EBI-1146043

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

cytoplasm

From EcoCyc[3]


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MTKHYDYIAI GGGSGGIASI NRAAMYGQKC ALIEAKELGG TCVNVGCVPK KVMWHAAQIR
EAIHMYGPDY GFDTTINKFN WETLIASRTA YIDRIHTSYE NVLGKNNVDV IKGFARFVDA
KTLEVNGETI TADHILIATG GRPSHPDIPG VEYGIDSDGF FALPALPERV AVVGAGYIAV
ELAGVINGLG AKTHLFVRKH APLRSFDPMI SETLVEVMNA EGPQLHTNAI PKAVVKNTDG
SLTLELEDGR SETVDCLIWA IGREPANDNI NLEAAGVKTN EKGYIVVDKY QNTNIEGIYA
VGDNTGAVEL TPVAVAAGRR LSERLFNNKP DEHLDYSNIP TVVFSHPPIG TVGLTEPQAR
EQYGDDQVKV YKSSFTAMYT AVTTHRQPCR MKLVCVGSEE KIVGIHGIGF GMDEMLQGFA
VALKMGATKK DFDNTVAIHP TAAEEFVTMR
Length

450

Mol. Wt

48.772 kDa

pI

5.9 (calculated)

Extinction coefficient

40,340 - 41,090 (calc based on 16 Y, 3 W, and 6 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

169..251

PF00070 Pyridine nucleotide-disulphide oxidoreductase

PMID:19920124

Domain

339..450

PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

PMID:19920124

Domain

6..308

PF07992 Pyridine nucleotide-disulphide oxidoreductase

PMID:19920124

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=gor taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131372

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948014

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011432

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P06715

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10412

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10412

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948014

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000405

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0407

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MC4100

7.63E+02

molecules/cell

  • Medium: median data from rich and minimal media
  • Temperature (°C): 37
  • Doubling time (min): Growth Rate(min):
  • Growth phase: other:

emPAI

PMID:18304323

Protein

Ecoli K-12

1.478+/-0.05

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

Single Molecule Fluorescence

PMID:20671182

mRNA

Ecoli K-12

0.056952663

Molecules/cell

  • Medium:
  • Temperature (°C):
  • Doubling time (min): Growth Rate(min): *
  • Growth phase: other: *

by RNA_Seq

PMID:20671182

Protein

E. coli K-12 MG1655

3255

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

1055

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

1664

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

gor

Figure courtesy of RegulonDB

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Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:3644302..3644342 source=MG1655 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

</protect>

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference


Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b3500 (EcoliWiki Page)

NCBI GEO profiles for gor

microarray

GenExpDB:b3500 (EcoliWiki Page)

Summary of data for gor from multiple microarray studies


Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

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Notes

Accessions Related to gor Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10412

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0407

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b3500

EcoGene

EcoGene:EG10412

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000405

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011432

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000017329 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000004980 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G54660 (score: 1.000; bootstrap: 100%)
  • AT3G24170 (score: 0.149)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000009363 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000039651 (score: 0.829)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00031296 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00008117 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000009702 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007813 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050522-116 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-050522-116 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231410 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0020653 (score: 1.000; bootstrap: 100%)
  • FBgn0037170 (score: 0.525)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15270-PA (score: 1.000; bootstrap: 100%)
  • GA10979-PA (score: 0.708)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000003091 (score: 1.000; bootstrap: 81%)
  • ENSGALP00000009979 (score: 0.351)
  • ENSGALP00000020730 (score: 0.345)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000221130 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000015860 (score: 1.000; bootstrap: 99%)
  • ENSMMUP00000002286 (score: 0.392)
  • ENSMMUP00000022553 (score: 0.255)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000023716 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Mus musculus

  • MGI:95804 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q7XEM9 (score: 1.000; bootstrap: 99%)
  • Q8S5T1 (score: 0.653)
  • O64409 (score: 0.351)
  • Q6K3E8 (score: 0.158)
  • P48642 (score: 0.158)
  • Q6UQ06 (score: 0.149)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000026437 (score: 1.000; bootstrap: 59%)
  • ENSPTRP00000042245 (score: 0.123)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000020252 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YPL091W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC17A37 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000132096 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00029259001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000024638 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

GOR

From SHIGELLACYC

E. coli O157

GOR

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

Pfam (EcoliWiki Page)

PF00070 Pyridine nucleotide-disulphide oxidoreductase

Superfamily (EcoliWiki Page)

SUPERFAMILY:51905

Panther (EcoliWiki Page)

PTHR22912:SF50

Superfamily (EcoliWiki Page)

SUPERFAMILY:55424

Pfam (EcoliWiki Page)

PF07992 Pyridine nucleotide-disulphide oxidoreductase

EcoCyc

EcoCyc:EG10412

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10412

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000405

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0407

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011432

Escherichia coli str. K-12 substr. MG1655

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See Help:References for how to manage references in EcoliWiki.

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 1.16 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. 5.0 5.1 5.2 CGSC: The Coli Genetics Stock Center
  6. 6.0 6.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).

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