ftsK:On One Page
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Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
Quickview | | Gene | | Product(s) | | Expression| | Evolution | | References | |
Quickview
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Standard Name |
ftsK |
---|---|
Gene Synonym(s) | |
Product Desc. |
essential cell division protein FtsK [3][4][5]; Component of Xer site-specific recombination system[5][6] DNA translocase at septal ring sorting daughter chromsomes[7][6] Couples cell division and chromosome segregation. [8] Required at an early step in septation. [3] |
Product Synonyms(s) |
DNA-binding membrane protein required for chromosome resolution and partitioning[1], B0890[4][1], DinH[4][1], FtsK[4][1] , dinH, ECK0881, JW0873, b0890 |
Function from GO |
<GO_nr /> |
Knock-Out Phenotype |
ts mutants filament |
Regulation/Expression | |
Regulation/Activity | |
Quick Links | |
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Notes
FtsK is required for resolution of chromosome dimers at dif by XerCD. FtsK helps keep the nucleoids properly localized, recognizing opposing replichores by using FtsK orienting polar sequences (KOPS). The N-terminal domain is membrane-anchored, localizes to the division septum and is required for cell division. The C-terminal domain has the non-essential translocase activity, which becomes essential for replicating the asymmetric replichores produced by chromosome inversion (Lesterlin, 2008). LexA regulon. Homologous to B. subtilis SpoIIIE protein. The ftsK gene is essential. The filamentous growth of mutants is suppressed by dacA deletions. ftsK44(ts) can be suppressed by an ftsA R286W mutation or by an ftsQAZ plasmid. Divisome.[7]
Gene
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Nomenclature
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
Standard name |
ftsK |
---|---|
Mnemonic |
filamentation temperature sensitive Filamentation, temperature sensitive |
Synonyms | |
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Notes
Location(s) and DNA Sequence
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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
---|---|---|---|---|
MG1655 |
20.1 minutes |
MG1655: 932447..936436 |
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NC_012967: 950282..954310 |
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NC_012759: 835415..839404 |
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W3110 |
|
W3110: 933646..937635 |
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DH10B: 986375..990364 |
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Notes
Sequence Features
See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
Feature Type | Strain | Genomic Location | Evidence | Reference | Notes |
---|---|---|---|---|---|
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Notes
Alleles and Phenotypes
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
Allele | Nt change(s) | AA change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
---|---|---|---|---|---|---|---|
LC(del) |
PMID:15522074 |
Carries a deletion of FtsK L and FtsK C | |||||
ftsKG80A |
G80A |
In Toe44; loss of function under extreme conditions |
seeded from UniProt:P46889 | ||||
ftsKE58A |
E58A |
Loss of function |
seeded from UniProt:P46889 | ||||
NC |
PMID:15522074 |
Barre |
Deletion of the FtsK Linker | ||||
NL hi C |
PMID:15522074 |
Barre |
Carries swaps b/t E.coli and H. influenzae FtsK regions | ||||
ftsK A |
K997A |
PMID:15522074 |
Barre |
Carries a single point mutation in the walker A motif of FtsK C | |||
NLC hi |
PMID:15522074 |
Barre |
Carries swaps b/t E.coli and H.influenzae FtsK regions | ||||
ftsk::cat1 |
PMID:9721304 |
Donachie Sheratt |
only expresses the NTD due to a Cm resistance cassette at nt 678 of ftsK | ||||
ftsk44 |
missense mutation |
G80A |
Growth Phenotype |
temperature sensitive late stage block in division, but does not affect chromosome replication or segregation forms long filamentous cells at 42C |
PMID:7592387 PMID:9721304 |
Donachie |
this is the allele from the TOE44 strain listed in this table. |
ftsK1::cat |
abnormal nucleoid segregation- asymmetrically positioned nucleoids and large anucleate regions inhibited cell-cell separation |
|
defect in the C-terminus of FtsK | ||||
ftsK1::cat mukB(del) |
Growth Phenotype |
synthetically lethal |
PMID:9829960 |
shown that it must be complemented in trans | |||
ftsK::cat-2 |
Δ54-2201 |
PMID:9721304 |
almost the entire N-terminal membrane-spanning domain is deleted, and the C-terminal fragment is out of frame with the cat gene. Lethal- must be complemented in trans | ||||
ftsK::cat-Δ5 |
Δ54-3651 |
PMID:9721304 |
this is a deletion of 90% of ftsK | ||||
ftsK3531 |
missense mutation |
Growth Phenotype |
same phenotype as ftsK44- temperature sensitive late stage block in division, but does not affect chromosome replication or segregation |
PMID:9721304 |
suppressed by high salt (1% NaCl) in the medium or by insertional inactivation of the dacA gene, encoding PBP5. | ||
ftsK::cat-2(del) dacA(del)::kan |
Cell Shape |
|
PMID:9721304 |
||||
ftsK::cat-5(del) dac(del)::kan |
synthetically lethal |
PMID:9721304 |
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ftsKC priA2::kan |
Growth Phenotype |
synthetically lethal |
PMID:11459954 |
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ftsK1::cat minB(del) |
Growth Phenotype |
chains of minicells generated (many of which contained DNA) |
PMID:9829960 |
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ftsK100 |
K997A |
ATP mutant |
PMID:18363794 |
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ftsK10 |
Growth Phenotype |
affects expression form the uspA promoter, results in salt sensitivity, stationary-phase survival is impaired, and cell-cell separation is blocked |
PMID:9294449 |
Also called usoM10 | |||
ftsK |
deletion in the c-terminal |
Growth Phenotype |
inhibits FtsK activity and increases recombination near dif |
PMID:15916604 PMID:9294449 |
| ||
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Notes
Deletions that leave the membrane segments intact are viable[9]. Suppressors of the ftsK chaining/filamentation phenotype are discussed in Geissler and Margolin (2005)[10].
Genetic Interactions
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Interactor | Interaction | Allele | Score(s) | Reference(s) | Accessions | Notes |
---|---|---|---|---|---|---|
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Notes
Genetic Resources
See Help:Gene_resources for help entering information into the Genetic Resources table.
Resource | Resource Type | Source | Notes/Reference |
---|---|---|---|
JW0873 |
Plasmid clone |
PMID:16769691 Status:Clone OK Primer 1:GCCAGCCAGGAATACATTGAAGA Primer 2:CCGTCAAACGGCGGTGGGGCCAG | |
Kohara Phage |
PMID:3038334 | ||
Kohara Phage |
PMID:3038334 | ||
zbh-29::Tn10 |
Linked marker |
est. P1 cotransduction: % [12] | |
zca-1230::Tn10 |
Linked marker |
est. P1 cotransduction: 61% [12] | |
W3110::Plac-ftsK |
Strain |
Depletion Strain[3] | |
pWL71 |
Plasmid Clone |
Pbad-FtsK(1-202)-GFP |
Successfully complements the W3110::Plac-ftsK depletion strain[3] |
pWL72 |
Plasmid Clone |
Pbad-FtsK(1-211)-GFP |
Successfully complements the W3110::Plac-ftsK depletion strain [3] |
pWL73 |
Plasmid Clone |
Pbad-FtsK(1-251)-GFP |
Successfully complements the W3110::Plac-ftsK depletion strain [3] |
pWL74 |
Plasmid Clone |
Pbad-FtsK(1-644) |
Successfully complements the W3110::Plac-ftsK depletion strain [3] |
pWL75 |
Plasmid Clone |
Pbad-FtsK(1-1329) |
Successfully complements the W3110::Plac-ftsK depletion strain [3] |
pWL76 |
Plasmid Clone |
Pbad-FtsK(1-19 and 637-1329)- N-terminal 19 amino acids fused in phase to amino acid residue 637 of FtsK |
Cannot complement the W3110::Plac-ftsK depletion strain [3] |
pFtsK-PhoA plasmids |
Plasmid Clone |
This represents multiple plasmids with phoA inserted at various positions[13]. | |
pFtsK-LacZ plasmids |
Plasmid Clone |
This represents multiple plasmids with lacZ inserted at various positions[13]. | |
pFLAG-FtsK plasmids |
Plasmid Clone |
This reference describes plasmids with various FtsK truncations N-terminally tagged to FLAG[14]. | |
MA3 |
Strain |
AB1157ftsK |
PMID:10523315 |
GR51 |
Strain |
AB1157xerCftsK |
PMID:10523315 |
GR59 |
Strain |
AB1157ftsK recA56 srl::Tn10 |
PMID:10523315 |
FC1 |
Strain |
AB1157, ftsK100 K997A (ATP mutant), CmR |
PMID:18363794 |
FtsK-YFP |
Plasmid Clone |
|
PMID:18363794 |
FtsKΔγ |
Plasmid Clone |
FtsK50C deleted from residue 1248 |
PMID:19854947 |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
EcoCyc:G6464 |
Escherichia coli str. K-12 substr. MG1655 | |
EcoGene:EG13226 |
Escherichia coli str. K-12 substr. MG1655 | |
RegulonDB:ECK120003064 |
Escherichia coli str. K-12 substr. MG1655 | |
Escherichia coli str. K-12 substr. MG1655 | ||
EchoBASE:EB3016 |
Escherichia coli str. K-12 substr. MG1655 | |
ASAP:ABE-0003027 |
Escherichia coli str. K-12 substr. MG1655 | |
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Notes
Links
Name | URL | Comments |
---|---|---|
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Product(s)
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Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Standard name |
FtsK |
---|---|
Synonyms |
DNA-binding membrane protein required for chromosome resolution and partitioning[1], B0890[4][1], DinH[4][1], FtsK[4][1] , dinH, ECK0881, JW0873, b0890 |
Product description |
essential cell division protein FtsK [3][4][5]; Component of Xer site-specific recombination system[5][6] DNA translocase at septal ring sorting daughter chromsomes[7][6] Couples cell division and chromosome segregation. [8] Required at an early step in septation. [3] |
EC number (for enzymes) |
|
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
---|---|---|---|---|---|---|---|---|
GO:0051301 |
cell division |
PMID:9721304 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0007059 |
chromosome segregation |
PMID:12034757 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0051301 |
cell division |
PMID:7592387 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0000166 |
nucleotide binding |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002543 |
F |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0007059 |
chromosome segregation |
PMID:17805344 |
IMP: Inferred from Mutant Phenotype |
P |
expression of the cytoplasmic domain of FtsK facilitates chromosome segregation in parC(ts) and parE(ts) cells |
complete | ||
GO:0000166 |
nucleotide binding |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
SP_KW:KW-0547 |
F |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0005886 |
plasma membrane |
PMID:10922461 |
EXP: Inferred from Experiment |
C |
complete | |||
GO:0005524 |
ATP binding |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002543 |
F |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0051301 |
cell division |
PMID:9294448 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0005524 |
ATP binding |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
SP_KW:KW-0067 |
F |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0006970 |
response to osmotic stress |
PMID:9294448 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0005887 |
integral to plasma membrane |
PMID:10922461 |
IDA: Inferred from Direct Assay |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0003677 |
DNA binding |
PMID:18722176 |
IDA: Inferred from Direct Assay |
F |
complete | |||
GO:0007049 |
cell cycle |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002543 |
P |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0016887 |
ATPase activity |
PMID:18722176 |
IDA: Inferred from Direct Assay |
F |
complete | |||
GO:0007049 |
cell cycle |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
SP_KW:KW-0131 |
P |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0007059 |
chromosome segregation |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
InterPro:IPR002543 |
P |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0007059 |
chromosome segregation |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
SP_KW:KW-0159 |
P |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0007059 |
chromosome segregation |
PMID:12034757 |
IGI: Inferred from Genetic Interaction |
P |
Seeded from EcoCyc (v14.0) |
Missing: with/from | ||
GO:0007059 |
chromosome segregation |
PMID:12034757 |
IGI: Inferred from Genetic Interaction |
UniProtKB:P0A734 UniProtKB:P0AEZ3 UniProtKB:P18196
|
P |
Seeded from EcoCyc (v14.0) |
complete | |
GO:0015616 |
DNA translocase activity |
PMID:16301526 |
IDA: Inferred from Direct Assay |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0043565 |
sequence-specific DNA binding |
PMID:17041598 |
IMP: Inferred from Mutant Phenotype |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0043565 |
sequence-specific DNA binding |
PMID:17057717 |
IDA: Inferred from Direct Assay |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0045941 |
positive regulation of transcription |
PMID:9294448 |
IMP: Inferred from Mutant Phenotype |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
GO:0016020 |
membrane |
PMID:9723913 |
IDA: Inferred from Direct Assay |
C |
complete | |||
GO:0016020 |
membrane |
PMID:10922461 |
IDA: Inferred from Direct Assay |
C |
complete | |||
GO:0071236 |
cellular response to antibiotic |
PMID:9723913 |
IMP: Inferred from Mutant Phenotype |
P |
mitomycin C |
complete | ||
GO:0007059 |
chromosome segregation |
PMID:9829960 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0015616 |
DNA translocase activity |
PMID:19854947 |
IDA: Inferred from Direct Assay |
F |
complete | |||
GO:0016887 |
ATPase activity |
PMID:19854947 |
IDA: Inferred from Direct Assay |
F |
complete | |||
GO:0007059 |
chromosome segregation |
PMID:19854947 |
IDA: Inferred from Direct Assay |
P |
complete | |||
GO:0051301 |
cell division |
PMID:9829960 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0007059 |
chromosome segregation |
PMID:19854947 |
IPI: Inferred from Physical Interaction |
UniProtKB:P0A8P6 UniProtKB:P0A8P8
|
P |
complete | ||
GO:0045893 |
positive regulation of transcription, DNA-dependent |
PMID:9294448 |
IMP: Inferred from Mutant Phenotype |
P |
increases PuspA activity in stationary phase |
complete | ||
Contributes to |
GO:0006265 |
DNA topological change |
PMID:20081205 |
IDA: Inferred from Direct Assay |
P |
stimulates Topo IV's ability to relax positively supercoiled DNA |
complete | |
GO:0009651 |
response to salt stress |
PMID:9294448 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
Contributes to |
GO:0007059 |
chromosome segregation |
PMID:20081205 |
IDA: Inferred from Direct Assay |
P |
stimulates Topo IV's decatenation ability |
complete | |
GO:0000920 |
cytokinetic cell separation |
PMID:9294448 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0007059 |
chromosome segregation |
PMID:12034757 |
IMP: Inferred from Mutant Phenotype |
P |
complete | |||
GO:0007059 |
chromosome segregation |
PMID:12034757 |
IGI: Inferred from Genetic Interaction |
UniProtKB:P0A734 UniProtKB:P0AEZ3 UniProtKB:P18196
|
P |
complete | ||
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Partner Type | Partner | Notes | References | Evidence |
---|---|---|---|---|
Protein |
Subunits of Xer site-specific recombination system |
could be indirect |
||
Protein |
aceE |
PMID:15690043 |
Experiment(s):EBI-888719 | |
Protein |
rpsJ |
PMID:19402753 |
LCMS(ID Probability):99.6 | |
Protein |
yfiD |
PMID:19402753 |
LCMS(ID Probability):99.6 | |
Protein |
ParC subunit of Topo IV |
PMID:12939258 |
||
Protein |
Either subunit of the XerCD Recombinase |
PMID:19854947 |
Triplex Displacement Assays | |
Protein |
FtsZ and FtsA |
FtsK localization depends on FtsZ and FtsA prior localization |
PMID:9723913 |
|
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
Compartment | Description | Evidence | Reference/Source | Notes |
---|---|---|---|---|
plasma membrane |
C-terminus localized in the cytoplasm with 6 predicted transmembrane domains |
Daley et al. (2005) [15] |
||
Inner membrane |
GFP fusion localization |
PMID:9495771 |
Signal sequence in the N-terminal domain of the protein |
|
Inner membrane |
PhoA and beta-gal assays |
PMID:10922461 |
||
Cytosol |
FtsK (818-1329) |
Microscopy |
PMID:11114887 |
|
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Name | |
---|---|
Sequence |
MSQEYIEDKE VTLTKLSSGR RLLEALLILI VLFAVWLMAA LLSFNPSDPS WSQTAWHEPI HNLGGMPGAW LADTLFFIFG VMAYTIPVII VGGCWFAWRH QSSDEYIDYF AVSLRIIGVL ALILTSCGLA AINADDIWYF ASGGVIGSLL STTLQPLLHS SGGTIALLCV WAAGLTLFTG WSWVTIAEKL GGWILNILTF ASNRTRRDDT WVDEDEYEDD EEYEDENHGK QHESRRARIL RGALARRKRL AEKFINPMGR QTDAALFSGK RMDDDEEITY TARGVAADPD DVLFSGNRAT QPEYDEYDPL LNGAPITEPV AVAAAATTAT QSWAAPVEPV TQTPPVASVD VPPAQPTVAW QPVPGPQTGE PVIAPAPEGY PQQSQYAQPA VQYNEPLQQP VQPQQPYYAP AAEQPAQQPY YAPAPEQPVA GNAWQAEEQQ STFAPQSTYQ TEQTYQQPAA QEPLYQQPQP VEQQPVVEPE PVVEETKPAR PPLYYFEEVE EKRAREREQL AAWYQPIPEP VKEPEPIKSS LKAPSVAAVP PVEAAAAVSP LASGVKKATL ATGAAATVAA PVFSLANSGG PRPQVKEGIG PQLPRPKRIR VPTRRELASY GIKLPSQRAA EEKAREAQRN QYDSGDQYND DEIDAMQQDE LARQFAQTQQ QRYGEQYQHD VPVNAEDADA AAEAELARQF AQTQQQRYSG EQPAGANPFS LDDFEFSPMK ALLDDGPHEP LFTPIVEPVQ QPQQPVAPQQ QYQQPQQPVP PQPQYQQPQQ PVAPQPQYQQ PQQPVAPQQQ YQQPQQPVAP QQQYQQPQQP VAPQPQDTLL HPLLMRNGDS RPLHKPTTPL PSLDLLTPPP SEVEPVDTFA LEQMARLVEA RLADFRIKAD VVNYSPGPVI TRFELNLAPG VKAARISNLS RDLARSLSTV AVRVVEVIPG KPYVGLELPN KKRQTVYLRE VLDNAKFRDN PSPLTVVLGK DIAGEPVVAD LAKMPHLLVA GTTGSGKSVG VNAMILSMLY KAQPEDVRFI MIDPKMLELS VYEGIPHLLT EVVTDMKDAA NALRWCVNEM ERRYKLMSAL GVRNLAGYNE KIAEADRMMR PIPDPYWKPG DSMDAQHPVL KKEPYIVVLV DEFADLMMTV GKKVEELIAR LAQKARAAGI HLVLATQRPS VDVITGLIKA NIPTRIAFTV SSKIDSRTIL DQAGAESLLG MGDMLYSGPN STLPVRVHGA FVRDQEVHAV VQDWKARGRP QYVDGITSDS ESEGGAGGFD GAEELDPLFD QAVQFVTEKR KASISGVQRQ FRIGYNRAAR IIEQMEAQGI VSEQGHNGNR EVLAPPPFD |
Length |
1,329 |
Mol. Wt |
146.661 kDa |
pI |
4.8 (calculated) |
Extinction coefficient |
173,040 - 173,540 (calc based on 46 Y, 19 W, and 4 C residues) |
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Domains/Motifs/Modification Sites
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
Structure
| </protect>
Structure figures<protect> | ||||||
Notes
- Membrane topology studies using phoA and lacZ fusions are described in Dorazi et al.(2000)[13]
- Crystal structure of P. aeruginosa FtsK complexed with KOPS with a putative molecular mechanism for loading and translocation may be found in Lowe et al. (2008)[16].
- FtsK links chromosome segregation to septation via its domain structure. The N-terminal domain is required for septation and its C-terminal domain is required for chromosome segregation[17].
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Resource type | Source | Notes/Reference |
---|---|---|
Antibody |
raised against FtsK(447-729) |
isolated from rabbit [3] |
Purification protocol |
| |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
ASAP:ABE-0003027 |
Escherichia coli str. K-12 substr. MG1655 | |
Escherichia coli str. K-12 substr. MG1655 | ||
EcoCyc:G6464 |
Escherichia coli str. K-12 substr. MG1655 | |
EcoGene:EG13226 |
Escherichia coli str. K-12 substr. MG1655 | |
Escherichia coli str. K-12 substr. MG1655 | ||
RegulonDB:ECK120003064 |
Escherichia coli str. K-12 substr. MG1655 | |
EchoBASE:EB3016 |
Escherichia coli str. K-12 substr. MG1655 | |
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Notes
Links
Name | URL | Comments |
---|---|---|
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Expression
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Overview
This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.
Cellular Levels
Molecule | Organism or Strain | Value | Units | Experimental Conditions | Assay used | Notes | Reference(s) |
---|---|---|---|---|---|---|---|
Protein |
E. coli K-12 MC4100 |
1.64E+02 |
molecules/cell |
|
emPAI |
PMID:18304323 | |
Protein |
Ecoli K-12 |
4.585+/-0.025 |
Molecules/cell |
|
Single Molecule Fluorescence |
PMID:20671182 | |
mRNA |
Ecoli K-12 |
0.030458762 |
Molecules/cell |
|
by RNA_Seq |
PMID:20671182 | |
Protein |
E. coli K-12 MG1655 |
508 |
molecules/cell/generation |
|
Ribosome Profiling |
PMID: 24766808 | |
Protein |
E. coli K-12 MG1655 |
213 |
molecules/cell/generation |
|
Ribosome Profiling |
PMID: 24766808 | |
Protein |
E. coli K-12 MG1655 |
376 |
molecules/cell/generation |
|
Ribosome Profiling |
PMID: 24766808 | |
edit table |
Notes
Transcription and Transcriptional Regulation
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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.
|
![]() Figure courtesy of RegulonDB |
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Notes
This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.
Protection from DNA damage is increased when FtsK is overexpressed. [3]
Filaments lacking constrictions are produced when FtsK is depleted.[3]
Translation and Regulation of Translation
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name=NC_000913:932427..932467
source=MG1655
type=Gene+DNA_+Protein
preset=Nterminus
</gbrowseImage>
This picture shows the sequence around the N-terminus.
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Notes
This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.
Turnover and Regulation of Turnover
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Notes
This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.
Experimental
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Mutations Affecting Expression
See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.
Allele Name | Mutation | Phenotype | Reference |
---|---|---|---|
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Expression Studies
See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.
Type | Reference | Notes |
---|---|---|
microarray |
NCBI GEO profiles for ftsK | |
microarray |
Summary of data for ftsK from multiple microarray studies | |
edit table |
Expression Resources
See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.
Resource Name | Resource Type | Description | Source | Notes |
---|---|---|---|---|
GFP Fusion |
Intergenic region (932236..932512) fused to gfpmut2. |
GFP fusion described in Zaslaver, et al. | ||
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Notes
Accessions Related to ftsK Expression
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
EcoCyc:G6464 |
Escherichia coli str. K-12 substr. MG1655 | |
EchoBASE:EB3016 |
Escherichia coli str. K-12 substr. MG1655 | |
EcoGene:EG13226 |
Escherichia coli str. K-12 substr. MG1655 | |
RegulonDB:ECK120003064 |
Escherichia coli str. K-12 substr. MG1655 | |
ASAP:ABE-0003027 |
Escherichia coli str. K-12 substr. MG1655 | |
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Notes
Links
Name | URL | Comments |
---|---|---|
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Evolution
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Homologs in Other Organisms
See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.
Organism | Homologs (Statistics) | Comments |
---|---|---|
Apis mellifera |
|
From Inparanoid:20070104 |
Caenorhabditis briggsae |
|
From Inparanoid:20070104 |
Caenorhabditis elegans |
|
From Inparanoid:20070104 |
Ciona intestinalis |
|
From Inparanoid:20070104 |
Danio rerio |
|
From Inparanoid:20070104 |
Dictyostelium discoideum |
|
From Inparanoid:20070104 |
Drosophila melanogaster |
|
From Inparanoid:20070104 |
Gallus gallus |
|
From Inparanoid:20070104 |
Homo sapiens |
|
From Inparanoid:20070104 |
Macaca mulatta |
|
From Inparanoid:20070104 |
Mus musculus |
|
From Inparanoid:20070104 |
Pan troglodytes |
|
From Inparanoid:20070104 |
Xenopus tropicalis |
|
From Inparanoid:20070104 |
Shigella flexneri |
FTSK |
From SHIGELLACYC |
E. coli O157 |
FTSK |
From ECOO157CYC |
edit table |
Do-It-Yourself Web Tools
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Notes
The N-terminal domain sequence of FtsK is conserved only in proteobacteria while the C-terminus DNA translocation domain in conserved in most bacterial species[10][19][20].
Families
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
EcoCyc:G6464 |
Escherichia coli str. K-12 substr. MG1655 | |
EcoGene:EG13226 |
Escherichia coli str. K-12 substr. MG1655 | |
RegulonDB:ECK120003064 |
Escherichia coli str. K-12 substr. MG1655 | |
EchoBASE:EB3016 |
Escherichia coli str. K-12 substr. MG1655 | |
ASAP:ABE-0003027 |
Escherichia coli str. K-12 substr. MG1655 | |
edit table |
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Notes
Links
Name | URL | Comments |
---|---|---|
edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 Arnau, J et al. (1997) Cloning, expression, and characterization of the Lactococcus lactis pfl gene, encoding pyruvate formate-lyase. J. Bacteriol. 179 5884-91 PubMed
- ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 3.11 3.12 3.13 Wang, L & Lutkenhaus, J (1998) FtsK is an essential cell division protein that is localized to the septum and induced as part of the SOS response. Mol. Microbiol. 29 731-40 PubMed
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 5.0 5.1 5.2 5.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 6.0 6.1 6.2 6.3 Capiaux, H et al. (2002) A dual role for the FtsK protein in Escherichia coli chromosome segregation. EMBO Rep. 3 532-6 PubMed
- ↑ 7.0 7.1 7.2 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 8.0 8.1 Robertson, S (1992) Putting pen to paper. Aust Crit Care 5 2 PubMed
- ↑ Draper, GC et al. (1998) Only the N-terminal domain of FtsK functions in cell division. J. Bacteriol. 180 4621-7 PubMed
- ↑ 10.0 10.1 Geissler, B & Margolin, W (2005) Evidence for functional overlap among multiple bacterial cell division proteins: compensating for the loss of FtsK. Mol. Microbiol. 58 596-612 PubMed
- ↑ 11.0 11.1 CGSC: The Coli Genetics Stock Center
- ↑ 12.0 12.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).
- ↑ 13.0 13.1 13.2 Dorazi, R & Dewar, SJ (2000) Membrane topology of the N-terminus of the Escherichia coli FtsK division protein. FEBS Lett. 478 13-8 PubMed
- ↑ Barre, FX et al. (2000) FtsK functions in the processing of a Holliday junction intermediate during bacterial chromosome segregation. Genes Dev. 14 2976-88 PubMed
- ↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed
- ↑ Löwe, J et al. (2008) Molecular mechanism of sequence-directed DNA loading and translocation by FtsK. Mol. Cell 31 498-509 PubMed
- ↑ Bigot, S et al. (2007) FtsK, a literate chromosome segregation machine. Mol. Microbiol. 64 1434-41 PubMed
- ↑ Zaslaver, A et al. (2006) A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Nat. Methods 3 623-8 PubMed
- ↑ Barre, FX et al. (2001) Circles: the replication-recombination-chromosome segregation connection. Proc. Natl. Acad. Sci. U.S.A. 98 8189-95 PubMed
- ↑ Barre, FX (2007) FtsK and SpoIIIE: the tale of the conserved tails. Mol. Microbiol. 66 1051-5 PubMed
Categories
- TMHMM Prediction
- Genes in OpenBioSystems with Promoter Fusions
- Genes with homologs in Apis mellifera
- Genes with homologs in Caenorhabditis briggsae
- Genes with homologs in Caenorhabditis elegans
- Genes with homologs in Ciona intestinalis
- Genes with homologs in Danio rerio
- Genes with homologs in Dictyostelium discoideum
- Genes with homologs in Drosophila melanogaster
- Genes with homologs in Gallus gallus
- Genes with homologs in Homo sapiens
- Genes with homologs in Macaca mulatta
- Genes with homologs in Mus musculus
- Genes with homologs in Pan troglodytes
- Genes with homologs in Xenopus tropicalis
- Genes with homologs in Shigella flexneri
- Genes with homologs in E. coli O157