lacZ:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=lacZ&s=search PortEco search(lacZ)]    [http://www.ecocyc.org/ECOLI/substring-search?type=NIL&object=lacZ&quickSearch=Quick+Search EcoCyc(lacZ)]    [http://ecoliwiki.net/tools/display_dna.php?gene=lacZ&loc=MG1655:365529..362455,W3110:365529..362455,REL606:338861..335787,BW2952:4175805..4179047 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4175805&end=4179047&gene=lacZ&aa=mtmitdslavvlqrrdwenpgvtqlnrlaahppfaswrnseeartdrpsqqlrslngewrfawfpapeavpeswlecdlpeadtvvvpsnwqmhgydapiytnvtypitvnppfvptenptgcysltfnvdeswlqegqtriifdgvnsafhlwcngrwvgygqdsrlpsefdlsaflragenrlavmvlrwsdgsyledqdmwrmsgifrdvsllhkpttqisdfhvatrfnddfsravleaevqmcgelrdylrvtvslwqgetqvasgtapfggeiiderggyadrvtlrlnvenpklwsaeipnlyravvelhtadgtlieaeacdvgfrevriengllllngkpllirgvnrhehhplhgqvmdeqtmvqdillmkqnnfnavrcshypnhplwytlcdryglyvvdeaniethgmvpmnrltddprwlpamservtrmvqrdrnhpsviiwslgnesghganhdalyrwiksvdpsrpvqyegggadttatdiicpmyarvdedqpfpavpkwsikkwlslpgetrplilceyahamgnslggfakywqafrqyprlqggfvwdwvdqslikydengnpwsayggdfgdtpndrqfcmnglvfadrtphpalteakhqqqffqfrlsgqtievtseylfrhsdnellhwmvaldgkplasgevpldvapqgkqlielpelpqpesagqlwltvrvvqpnatawseaghisawqqwrlaenlsvtlpaashaiphlttsemdfcielgnkrwqfnrqsgflsqmwigdkkqlltplrdqftrapldndigvseatridpnawverwkaaghyqaeaallqctadtladavlittahawqhqgktlfisrktyridgsgqmaitvdvevasdtphpariglncqlaqvaervnwlglgpqenypdrltaacfdrwdlplsdmytpyvfpsenglrcgtrelnygphqwrgdfqfnisrysqqqlmetshrhllhaeegtwlnidgfhmgiggddswspsvsaefqlsagryhyqlvwcqk Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lacZ+AND+escherichia+coli Pubmed(lacZ)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lacZ Textpresso(lacZ)]
[http://porteco.org/AjaxSearch.jsp?searchString=lacZ&s=search PortEco search(lacZ)]    [http://www.ecocyc.org/ECOLI/substring-search?type=NIL&object=lacZ&quickSearch=Quick+Search EcoCyc(lacZ)]    [http://ecoliwiki.net/tools/display_dna.php?gene=lacZ&loc=MG1655%3A365529..362455,W3110%3A365529..362455,REL606%3A338861..335787,BW2952%3A4175805..4179047 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4175805&end=4179047&gene=lacZ&aa=mtmitdslavvlqrrdwenpgvtqlnrlaahppfaswrnseeartdrpsqqlrslngewrfawfpapeavpeswlecdlpeadtvvvpsnwqmhgydapiytnvtypitvnppfvptenptgcysltfnvdeswlqegqtriifdgvnsafhlwcngrwvgygqdsrlpsefdlsaflragenrlavmvlrwsdgsyledqdmwrmsgifrdvsllhkpttqisdfhvatrfnddfsravleaevqmcgelrdylrvtvslwqgetqvasgtapfggeiiderggyadrvtlrlnvenpklwsaeipnlyravvelhtadgtlieaeacdvgfrevriengllllngkpllirgvnrhehhplhgqvmdeqtmvqdillmkqnnfnavrcshypnhplwytlcdryglyvvdeaniethgmvpmnrltddprwlpamservtrmvqrdrnhpsviiwslgnesghganhdalyrwiksvdpsrpvqyegggadttatdiicpmyarvdedqpfpavpkwsikkwlslpgetrplilceyahamgnslggfakywqafrqyprlqggfvwdwvdqslikydengnpwsayggdfgdtpndrqfcmnglvfadrtphpalteakhqqqffqfrlsgqtievtseylfrhsdnellhwmvaldgkplasgevpldvapqgkqlielpelpqpesagqlwltvrvvqpnatawseaghisawqqwrlaenlsvtlpaashaiphlttsemdfcielgnkrwqfnrqsgflsqmwigdkkqlltplrdqftrapldndigvseatridpnawverwkaaghyqaeaallqctadtladavlittahawqhqgktlfisrktyridgsgqmaitvdvevasdtphpariglncqlaqvaervnwlglgpqenypdrltaacfdrwdlplsdmytpyvfpsenglrcgtrelnygphqwrgdfqfnisrysqqqlmetshrhllhaeegtwlnidgfhmgiggddswspsvsaefqlsagryhyqlvwcqk Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lacZ+AND+escherichia+coli Pubmed(lacZ)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lacZ Textpresso(lacZ)]


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Revision as of 04:57, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

lacZ

Gene Synonym(s)

ECK0341, b0344, JW0335[1], JW0335

Product Desc.

beta-galactosidase[2][3];

Component of β-galactosidase[2][3]

beta-D-Galactosidase[4]

Product Synonyms(s)

beta-D-galactosidase[1], B0344[2][1], LacZ[2][1], beta-D-galactosidase[2][1], lactase[2][1], beta-D-galactoside galactohydrolase[2][1] , ECK0341, JW0335, b0344

Function from GO

<GO_nr />

Knock-Out Phenotype

unable to grow on lactose as a carbon source

Regulation/Expression

transcription unit(s): lacZYA[2], lacZ, OP00045, lacAYZ

Regulation/Activity
Quick Links

PortEco search(lacZ)    EcoCyc(lacZ)    DNA display    Protein display    Pubmed(lacZ)    Textpresso(lacZ)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Repressed during biofilm formation. LacZ has an Ig-like beta-sandwich domain (residues 221-334 align to PFAM: PF00703). ebgA, uidA and lacZ are paralogs. Binds TrxA (Kumar, 2004)[5].[4]



References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Kumar, JK et al. (2004) Proteomic analysis of thioredoxin-targeted proteins in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 101 3759-64 PubMed
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