lacZ:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0341, b0344, JW0335''<ref name='LIB:Riley_2006'/> | ''ECK0341, b0344, JW0335''<ref name='LIB:Riley_2006'/>, JW0335'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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beta-D-galactosidase<ref name='LIB:Riley_2006'/>, B0344<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LacZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, beta-D-galactosidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, lactase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, beta-D-galactoside galactohydrolase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''beta-D-galactosidase<ref name='LIB:Riley_2006'/>, B0344<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LacZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, beta-D-galactosidase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, lactase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, beta-D-galactoside galactohydrolase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0341, JW0335, b0344'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=lacZ&s=search PortEco search(lacZ)] [http://ecoliwiki.net/tools/display_dna.php?gene=lacZ&loc=MG1655:365529..362455,W3110:365529..362455,REL606:338861..335787,BW2952:4175805..4179047 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4175805&end=4179047&gene=lacZ&aa= Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lacZ+AND+escherichia+coli Pubmed(lacZ)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lacZ Textpresso(lacZ)] | [http://porteco.org/AjaxSearch.jsp?searchString=lacZ&s=search PortEco search(lacZ)] [http://www.ecocyc.org/ECOLI/substring-search?type=NIL&object=lacZ&quickSearch=Quick+Search EcoCyc(lacZ)] [http://ecoliwiki.net/tools/display_dna.php?gene=lacZ&loc=MG1655:365529..362455,W3110:365529..362455,REL606:338861..335787,BW2952:4175805..4179047 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4175805&end=4179047&gene=lacZ&aa= Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lacZ+AND+escherichia+coli Pubmed(lacZ)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lacZ Textpresso(lacZ)] | ||
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Revision as of 23:56, 20 June 2012
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
lacZ |
|---|---|
| Gene Synonym(s) |
ECK0341, b0344, JW0335[1], JW0335 |
| Product Desc. |
Component of β-galactosidase[2][3] beta-D-Galactosidase[4] |
| Product Synonyms(s) |
beta-D-galactosidase[1], B0344[2][1], LacZ[2][1], beta-D-galactosidase[2][1], lactase[2][1], beta-D-galactoside galactohydrolase[2][1] , ECK0341, JW0335, b0344 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype |
unable to grow on lactose as a carbon source |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(lacZ) EcoCyc(lacZ) DNA display Protein display Pubmed(lacZ) Textpresso(lacZ) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Repressed during biofilm formation. LacZ has an Ig-like beta-sandwich domain (residues 221-334 align to PFAM: PF00703). ebgA, uidA and lacZ are paralogs. Binds TrxA (Kumar, 2004)[5].[4]
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Kumar, JK et al. (2004) Proteomic analysis of thioredoxin-targeted proteins in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 101 3759-64 PubMed