eno:Gene Product(s): Difference between revisions

Standard name	Eno
Synonyms	enolase^[1], B2779^[2]^[1], Eno^[2]^[1] , ECK2773, JW2750, b2779
Product description	Eno^[2]^[3]; Component of enolase^[2]^[3]; degradosome^[3] Enolase; phosphoprotein; component of RNA degradosome^[4]
EC number (for enzymes)	4.2.1.11^[1]
edit table

Notes

Function

[back to top]

Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
	GO:0004634	phosphopyruvate hydratase activity	PMID:4942326^[5]	IDA: Inferred from Direct Assay		F		complete
	GO:0000015	phosphopyruvate hydratase complex	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000941	C	Seeded from EcoCyc (v14.0)	complete
	GO:0000015	phosphopyruvate hydratase complex	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020809	C	Seeded from EcoCyc (v14.0)	complete
	GO:0000015	phosphopyruvate hydratase complex	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020810	C	Seeded from EcoCyc (v14.0)	complete
	GO:0000015	phosphopyruvate hydratase complex	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020811	C	Seeded from EcoCyc (v14.0)	complete
	GO:0000287	magnesium ion binding	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_00318	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000287	magnesium ion binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000941	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000287	magnesium ion binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020809	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000287	magnesium ion binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020810	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000287	magnesium ion binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020811	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000287	magnesium ion binding	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0460	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000287	magnesium ion binding	PMID:16516921^[6]	IDA: Inferred from Direct Assay		F	Seeded from EcoCyc (v14.0)	complete
	GO:0004634	phosphopyruvate hydratase activity	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_00318	F	Seeded from EcoCyc (v14.0)	complete
	GO:0004634	phosphopyruvate hydratase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000941	F	Seeded from EcoCyc (v14.0)	complete
	GO:0004634	phosphopyruvate hydratase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020809	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005515	protein binding	PMID:16516921^[6]	IPI: Inferred from Physical Interaction	EcoliWiki:eno	F	Enolase is homodimeric (Figure 1).	complete
	GO:0004634	phosphopyruvate hydratase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020810	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005515	protein binding	PMID:16516921^[6]	IPI: Inferred from Physical Interaction	EcoliWiki:rne	F		complete
	GO:0004634	phosphopyruvate hydratase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020811	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000287	magnesium ion binding	PMID:16516921^[6]	IDA: Inferred from Direct Assay		F	Each monomer binds and coordinates 1 MG²⁺ cation (Figure 3).	complete
	GO:0004634	phosphopyruvate hydratase activity	GOA:spec GO_REF:0000003	IEA: Inferred from Electronic Annotation	EC:4.2.1.11	F	Seeded from EcoCyc (v14.0)	complete
	GO:0006096	glycolysis	PMID:410789^[7]	IMP: Inferred from Mutant Phenotype		P		complete
	GO:0005515	protein binding	PMID:16516921^[6]	IPI: Inferred from Physical Interaction		F	Seeded from EcoCyc (v14.0)	Missing: with/from
	GO:0005515	protein binding	PMID:16516921^[6]	IPI: Inferred from Physical Interaction	EcoliWiki:eno	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005576	extracellular region	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0964	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005576	extracellular region	GO_REF:0000023	IEA: Inferred from Electronic Annotation	SP_SL:SL-0243	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005829	cytosol	PMID:16858726^[8]	IDA: Inferred from Direct Assay		C	Seeded from EcoCyc (v14.0)	complete
	GO:0005856	cytoskeleton	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0206	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005856	cytoskeleton	GO_REF:0000023	IEA: Inferred from Electronic Annotation	SP_SL:SL-0090	C	Seeded from EcoCyc (v14.0)	complete
	GO:0006096	glycolysis	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_00318	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006096	glycolysis	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000941	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006096	glycolysis	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020809	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006096	glycolysis	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020810	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006096	glycolysis	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR020811	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006096	glycolysis	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0324	P	Seeded from EcoCyc (v14.0)	complete
	GO:0009986	cell surface	GOA:hamap GO_REF:0000020	IEA: Inferred from Electronic Annotation	HAMAP:MF_00318	C	Seeded from EcoCyc (v14.0)	complete
	GO:0009986	cell surface	GO_REF:0000023	IEA: Inferred from Electronic Annotation	SP_SL:SL-0310	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016020	membrane	PMID:16858726^[8]	IDA: Inferred from Direct Assay		C	Seeded from EcoCyc (v14.0)	complete
edit table

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
Protein	Subunits of enolase	could be indirect
Protein	aroF		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	rplI		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	yfeX		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	rplW		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	nadE		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	rdgC		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	ybdN		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	yqjK		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	racR		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	nanE		PMID:16606699^[9]	Experiment(s):EBI-1143906
Protein	dnaK		PMID:15690043^[10]	Experiment(s):EBI-880413, EBI-885840
Protein	fabZ		PMID:15690043^[10]	Experiment(s):EBI-880413
Protein	gltX		PMID:15690043^[10]	Experiment(s):EBI-880413
Protein	pnp		PMID:15690043^[10]	Experiment(s):EBI-880413, EBI-883913, EBI-891089, EBI-885840
Protein	yniC		PMID:15690043^[10]	Experiment(s):EBI-880413
Protein	pinR		PMID:15690043^[10]	Experiment(s):EBI-885840
Protein	rpsE		PMID:15690043^[10]	Experiment(s):EBI-885840
Protein	pinR		PMID:19402753^[11]	LCMS(ID Probability):99.6
Protein	Subunits of degradosome	could be indirect
edit table

Notes

IMP for enolase activity probably in ^[12] (based on abstract. need to get paper and read).

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Evidence	Reference/Source
cytoplasm		From EcoCyc^[3]
Cytoplasm	PMID:9298646^[13], PMID:8610017^[14], PMID:9600841^[15], PMID:9740056^[16], PMID:9732527^[17], PMID:12035760^[18]	EchoLocation:eno
edit table

Notes

Structure and Physical Properties

[back to top]

Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	at EcoCyc MSKIVKIIGR EIIDSRGNPT VEAEVHLEGG FVGMAAAPSG ASTGSREALE LRDGDKSRFL GKGVTKAVAA VNGPIAQALI GKDAKDQAGI DKIMIDLDGT ENKSKFGANA ILAVSLANAK AAAAAKGMPL YEHIAELNGT PGKYSMPVPM MNIINGGEHA DNNVDIQEFM IQPVGAKTVK EAIRMGSEVF HHLAKVLKAK GMNTAVGDEG GYAPNLGSNA EALAVIAEAV KAAGYELGKD ITLAMDCAAS EFYKDGKYVL AGEGNKAFTS EEFTHFLEEL TKQYPIVSIE DGLDESDWDG FAYQTKVLGD KIQLVGDDLF VTNTKILKEG IEKGIANSIL IKFNQIGSLT ETLAAIKMAK DAGYTAVISH RSGETEDATI ADLAVGTAAG QIKTGSMSRS DRVAKYNQLI RIEEALGEKA PYNGRKEIKG QA
Length	432
Mol. Wt	45.656 kDa
pI	5.3 (calculated)
Extinction coefficient	21,890 - 22,015 (calc based on 11 Y, 1 W, and 1 C residues)
edit table

Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	Notes	References
Initiator Methionine	1	Removed	UniProt:P0A6P9
Modification Site	375	phosphorylation site at T375	probability less than 75%	PMID:17938405^[19]
Modification Site	379	phosphorylation site at T379	probability less than 75%	PMID:17938405^[19]
Modification Site	372	phosphorylation site at S372	probability less than 75%	PMID:17938405^[19]
Domain	143..431	PF00113 Enolase, C-terminal TIM barrel domain		PMID:19920124^[20]
Domain	3..134	PF03952 Enolase, N-terminal domain		PMID:19920124^[20]
edit table

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=eno taxon=562,83333 </beststructure>

Models

View models at:

edit table

Structure figures

Notes

Gene Product Resources

[back to top]

See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
edit table

Notes

Accessions in Other Databases

[back to top]

See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
NCBI (Protein) (EcoliWiki Page)	GI:16130686	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:945032	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:ABE-0009110	Escherichia coli str. K-12 substr. MG1655
UniProt (EcoliWiki Page)	UniProtKB/Swiss-Prot:P0A6P9	Escherichia coli str. K-12 substr. MG1655
EcoCyc	EcoCyc:EG10258	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:EG10258	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:945032	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:ECK120000252	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:EB0254	Escherichia coli str. K-12 substr. MG1655
edit table

Notes

Links

[back to top]

Name	URL	Comments
edit table

References

[back to top]

See Help:References for how to manage references in EcoliWiki.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 ^3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
↑ Spring, TG & Wold, F (1971) The purification and characterization of Escherichia coli enolase. J. Biol. Chem. 246 6797-802 PubMed
↑ ^6.0 ^6.1 ^6.2 ^6.3 ^6.4 ^6.5 Chandran, V & Luisi, BF (2006) Recognition of enolase in the Escherichia coli RNA degradosome. J. Mol. Biol. 358 8-15 PubMed
↑ Irani, MH & Maitra, PK (1977) Properties of Escherichia coli mutants deficient in enzymes of glycolysis. J. Bacteriol. 132 398-410 PubMed
↑ ^8.0 ^8.1 Lasserre, JP et al. (2006) A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis 27 3306-21 PubMed
↑ ^9.00 ^9.01 ^9.02 ^9.03 ^9.04 ^9.05 ^9.06 ^9.07 ^9.08 ^9.09 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
↑ ^10.0 ^10.1 ^10.2 ^10.3 ^10.4 ^10.5 ^10.6 Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
↑ Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
↑ Irani, MH & Maitra, PK (1976) Glyceraldehyde 3-p dehydrogenase, glycerate 3-P kinase and enolase mutants of Escherichia coli: genetic studies. Mol. Gen. Genet. 145 65-71 PubMed
↑ Link, AJ et al. (1997) Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12. Electrophoresis 18 1259-313 PubMed
↑ Py, B et al. (1996) A DEAD-box RNA helicase in the Escherichia coli RNA degradosome. Nature 381 169-72 PubMed
↑ Wilkins, MR et al. (1998) Protein identification with N and C-terminal sequence tags in proteome projects. J. Mol. Biol. 278 599-608 PubMed
↑ Tonella, L et al. (1998) '98 Escherichia coli SWISS-2DPAGE database update. Electrophoresis 19 1960-71 PubMed
↑ Rompf, A et al. (1998) Changes in protein synthesis as a consequence of heme depletion in Escherichia coli. Curr. Microbiol. 37 226-30 PubMed
↑ Carpousis, AJ (2002) The Escherichia coli RNA degradosome: structure, function and relationship in other ribonucleolytic multienzyme complexes. Biochem. Soc. Trans. 30 150-5 PubMed
↑ ^19.0 ^19.1 ^19.2 Macek, B et al. (2008) Phosphoproteome analysis of E. coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation. Mol. Cell Proteomics 7 299-307 PubMed
↑ ^20.0 ^20.1 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

eno:Gene Product(s): Difference between revisions

Latest revision as of 04:21, 19 May 2019

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

@@ Line 35: / Line 35: @@
 *
 ****************************************************************************************** -->{{Product_nomenclature_help}}
-{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{|   id="E46aabd4706c51"  class=" tableEdit Product_nomenclature_table"
 |-
@@ Line 44: / Line 44: @@
 !align=left {{table heading style}} |Synonyms
 ||
-enolase<ref name='LIB:Riley_2006'/>, B2779<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Eno<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+''enolase<ref name='LIB:Riley_2006'/>, B2779<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Eno<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2773, JW2750, b2779''
 |-
 !align=left {{table heading style}} |Product description
@@ Line 52: / Line 52: @@
 Component of [[:Category:Complex:enolase|enolase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:degradosome|degradosome]]<ref name='LIB:EcoCyc11.1'/>
+Enolase; phosphoprotein; component of RNA degradosome<ref name='LIB:EcoGene'/>
 |-
 !align=left {{table heading style}} |EC number (for enzymes)
 ||
-** [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.11 4.2.1.11]<ref name='LIB:Riley_2006'/>
+* [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.11 4.2.1.11]<ref name='LIB:Riley_2006'/>
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.E46aabd4706c51&page=25894&pagename={{FULLPAGENAMEE}}&type=1&template=Product_nomenclature_table edit table] ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.E46aabd4706c51&page=25894&pagename={{FULLPAGENAMEE}}&type=1&template=Product_nomenclature_table edit table]</span> ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.E46aabd4706c51-->
-{{Product_nomenclature_help}}
 <protect><!--Nomenclature_notes--></protect>
 ===Notes===
@@ Line 69: / Line 70: @@
 {{BacktoTop}}
 <protect>
-<big>'''Gene Ontology'''</big><br />{{Product_GO_help}}<!--box uid=421aa90e079fa326b6494f812ad13e79.25894.C46aabd48d3832-->
+<big>'''Gene Ontology'''</big><br /><!--box uid=421aa90e079fa326b6494f812ad13e79.25894.C46aabd48d3832-->
 <!--
 ******************************************************************************************
 *
-*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
+** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 *
 ****************************************************************************************** -->{{Product_GO_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}}
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="C46aabd48d3832"  class=" tableEdit GO_table_product dataTable"
 |- {{table_heading_style}}
-!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
+!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
+|-
+|
+|
+GO:0004634
+|
+phosphopyruvate hydratase activity
+|
+PMID:4942326
+|
+IDA: Inferred from Direct Assay
+|
+|
+F
+|
+|
+complete
+|-
+|
+|
+GO:0000015
+|
+phosphopyruvate hydratase complex
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR000941
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0000015
+|
+phosphopyruvate hydratase complex
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR020809
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0000015
+|
+phosphopyruvate hydratase complex
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR020810
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0000015
+|
+phosphopyruvate hydratase complex
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR020811
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
 |-
 |
 |
-[[Category:GO:0046872_!_metal_ion_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0046872_!_metal_ion_binding GO:0046872]
+GO:0000287
 |
-metal ion binding
+magnesium ion binding
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GOA:hamap<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0479 SP_KW:KW-0479]
+HAMAP:MF_00318
 |
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 102: / Line 198: @@
 |
-[[Category:GO:0016829_!_lyase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016829_!_lyase_activity GO:0016829]
+GO:0000287
 |
-lyase activity
+magnesium ion binding
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR000941
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0000287
+|
+magnesium ion binding
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR020809
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0000287
+|
+magnesium ion binding
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0456 SP_KW:KW-0456]
+InterPro:IPR020810
 |
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 121: / Line 255: @@
 |
-[[Category:GO:0006096_!_glycolysis]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006096_!_glycolysis GO:0006096]
+GO:0000287
 |
-glycolysis
+magnesium ion binding
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000020 GO_REF:0000020]
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000941 InterPro:IPR000941]<br />[http://www.uniprot.org/keywords/KW-0324 SP_KW:KW-0324]<br />[http://ca.expasy.org/unirule/MF_00318 HAMAP:MF_00318]
+InterPro:IPR020811
 |
-P
+F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 140: / Line 274: @@
 |
-[[Category:GO:0005856_!_cytoskeleton]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005856_!_cytoskeleton GO:0005856]
+GO:0000287
 |
-cytoskeleton
+magnesium ion binding
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0206 SP_KW:KW-0206]
+SP_KW:KW-0460
 |
-C
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0000287
+|
+magnesium ion binding
+|
+PMID:16516921
+|
+IDA: Inferred from Direct Assay
+|
+|
+F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 159: / Line 312: @@
 |
-[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
+GO:0004634
 |
-cytoplasm
+phosphopyruvate hydratase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+GOA:hamap<br />GO_REF:0000020
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0963 SP_KW:KW-0963]
+HAMAP:MF_00318
 |
-C
+F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 178: / Line 331: @@
 |
-[[Category:GO:0004634_!_phosphopyruvate_hydratase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004634_!_phosphopyruvate_hydratase_activity GO:0004634]
+GO:0004634
 |
 phosphopyruvate hydratase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000003 GO_REF:0000003]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000020 GO_REF:0000020]
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000941 InterPro:IPR000941]<br />[http://www.expasy.org/cgi-bin/nicezyme.pl?4.2.1.11 EC:4.2.1.11]<br />[http://ca.expasy.org/unirule/MF_00318 HAMAP:MF_00318]
+InterPro:IPR000941
 |
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 197: / Line 350: @@
 |
-[[Category:GO:0000287_!_magnesium_ion_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0000287_!_magnesium_ion_binding GO:0000287]
+GO:0004634
 |
-magnesium ion binding
+phosphopyruvate hydratase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000020 GO_REF:0000020]
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/keywords/KW-0460 SP_KW:KW-0460]<br />[http://ca.expasy.org/unirule/MF_00318 HAMAP:MF_00318]
+InterPro:IPR020809
 |
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 216: / Line 369: @@
 |
-[[Category:GO:0000015_!_phosphopyruvate_hydratase_complex]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0000015_!_phosphopyruvate_hydratase_complex GO:0000015]
+GO:0005515
+|
+protein binding
+|
+PMID:16516921
+|
+IPI: Inferred from Physical Interaction
 |
-phosphopyruvate hydratase complex
+EcoliWiki:eno
+|
+F
+|
+Enolase is homodimeric (Figure 1).
+|
+complete
+|-
+|
+|
+GO:0004634
+|
+phosphopyruvate hydratase activity
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR000941 InterPro:IPR000941]
+InterPro:IPR020810
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0005515
+|
+protein binding
+|
+PMID:16516921
+|
+IPI: Inferred from Physical Interaction
+|
+EcoliWiki:rne
 |
-C
+F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
 |
 complete
@@ Line 235: / Line 430: @@
 |
-[[Category:GO:0004634_!_phosphopyruvate_hydratase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004634_!_phosphopyruvate_hydratase_activity GO:0004634]
+GO:0004634
 |
 phosphopyruvate hydratase activity
-|[[PMID:4942326]]<ref name=PMID:4942326/>
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR020811
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0000287
+|
+magnesium ion binding
+|
+PMID:16516921
 |
 IDA: Inferred from Direct Assay
@@ Line 246: / Line 461: @@
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Each monomer binds and coordinates 1 MG<sup>2+</sup> cation (Figure 3).
+|
+complete
+|-
+|
+|
+GO:0004634
+|
+phosphopyruvate hydratase activity
+|
+GOA:spec<br />GO_REF:0000003
+|
+IEA: Inferred from Electronic Annotation
+|
+EC:4.2.1.11
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006096
+|
+glycolysis
+|
+PMID:410789
+|
+IMP: Inferred from Mutant Phenotype
+|
+|
+P
+|
 |
 complete
@@ Line 253: / Line 506: @@
 |
-[[Category:GO:0005515_!_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005515_!_protein_binding GO:0005515]
+GO:0005515
 |
 protein binding
-|[[PMID:15236960]]<ref name=PMID:15236960/>
+|
+PMID:16516921
 |
 IPI: Inferred from Physical Interaction
 |
-[http://www.uniprot.org/uniprot/P21513 UniProtKB:P21513]
 |
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
+|
+Missing: with/from
+|-
+|
+|
+GO:0005515
+|
+protein binding
+|
+PMID:16516921
+|
+IPI: Inferred from Physical Interaction
+|
+EcoliWiki:eno
+|
+F
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0005576
+|
+extracellular region
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0964
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0005576
+|
+extracellular region
+|
+GO_REF:0000023
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_SL:SL-0243
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 271: / Line 582: @@
 |
-[[Category:GO:0005624_!_membrane_fraction]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005624_!_membrane_fraction GO:0005624]
+GO:0005829
 |
-membrane fraction
+cytosol
-|[[PMID:16858726]]<ref name=PMID:16858726/>
+|
+PMID:16858726
 |
 IDA: Inferred from Direct Assay
@@ Line 282: / Line 594: @@
 C
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 289: / Line 601: @@
 |
-[[Category:GO:0042802_!_identical_protein_binding]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0042802_!_identical_protein_binding GO:0042802]
+GO:0005856
+|
+cytoskeleton
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-identical protein binding
+IEA: Inferred from Electronic Annotation
-|[[PMID:15236960]]<ref name=PMID:15236960/>
 |
-IPI: Inferred from Physical Interaction
+SP_KW:KW-0206
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0005856
+|
+cytoskeleton
+|
+GO_REF:0000023
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_SL:SL-0090
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006096
+|
+glycolysis
+|
+GOA:hamap<br />GO_REF:0000020
+|
+IEA: Inferred from Electronic Annotation
+|
+HAMAP:MF_00318
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006096
+|
+glycolysis
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR000941
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006096
+|
+glycolysis
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR020809
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006096
+|
+glycolysis
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR020810
+|
+P
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0006096
+|
+glycolysis
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
 |
-[http://www.uniprot.org/uniprot/P0A6P9 UniProtKB:P0A6P9]
+InterPro:IPR020811
 |
-F
+P
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
 |-
 |
 |
-[[Category:GO:0009061_!_anaerobic_respiration]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0009061_!_anaerobic_respiration GO:0009061]
+GO:0006096
 |
-anaerobic respiration
+glycolysis
 |
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
+IEA: Inferred from Electronic Annotation
 |
+SP_KW:KW-0324
 |
 P
 |
-Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
+Seeded from [[EcoCyc]] (v14.0)
 |
-required fields missing
+complete
 |-
 |
 |
-[[Category:GO:0006094_!_gluconeogenesis]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006094_!_gluconeogenesis GO:0006094]
+GO:0009986
 |
-gluconeogenesis
+cell surface
 |
+GOA:hamap<br />GO_REF:0000020
 |
+IEA: Inferred from Electronic Annotation
 |
+HAMAP:MF_00318
 |
-P
+C
 |
-Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
+Seeded from [[EcoCyc]] (v14.0)
 |
-required fields missing
+complete
 |-
 |
+|
+GO:0009986
+|
+cell surface
+|
+GO_REF:0000023
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_SL:SL-0310
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0016020
 |
-[[Category:GO:0004634_!_phosphopyruvate_hydratase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0004634_!_phosphopyruvate_hydratase_activity GO:0004634]
+membrane
 |
-phosphopyruvate hydratase activity
+PMID:16858726
-|[[PMID:4942326]]<ref name=PMID:4942326/>
 |
 IDA: Inferred from Direct Assay
@@ Line 354: / Line 801: @@
 |
-F
+C
 |
-purification, assay according to ref 5, which is not in Pubmed
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.C46aabd48d3832&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=GO_table_product edit table] || || || || || || || ||
+|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.C46aabd48d3832&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=GO_table_product edit table]</div> || || || || || || || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.C46aabd48d3832-->
@@ Line 373: / Line 820: @@
 *
 ****************************************************************************************** -->{{Product_interactions_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="M46aabd66df967"  class=" tableEdit Product_interactions_table dataTable"
 |- {{table heading style}}
 !|Partner Type!!Partner!!Notes!!References!!Evidence
@@ Line 380: / Line 827: @@
 Protein
 |
-[http://www.uniprot.org/uniprot/Subuni Subuni]ts of [[:Category:Complex:enolase|enolase]]
+Subunits of [[:Category:Complex:enolase|enolase]]
 |
 could be indirect
@@ Line 391: / Line 838: @@
 Protein
 |
-[[aroF:Gene_Product(s)|aroF]]<br />
+aroF<br />
+|
+|
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
+|-
+|
+Protein
+|
+rplI<br />
+|
+|
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
+|-
+|
+Protein
+|
+yfeX<br />
+|
+|
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
+|-
+|
+Protein
+|
+rplW<br />
 |
-|[[PMID:16606699]]<ref name=PMID:16606699/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1143906 EBI-1143906]<br />
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
 |-
 |
 Protein
 |
-[[rplI:Gene_Product(s)|rplI]]<br />
+nadE<br />
 |
-|[[PMID:16606699]]<ref name=PMID:16606699/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1143906 EBI-1143906]<br />
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
 |-
 |
 Protein
 |
-[http://www.uniprot.org/uniprot/Subuni Subuni]ts of [[:Category:Complex:degradosome|degradosome]]
+rdgC<br />
+|
+|
+PMID:16606699
 |
-could be indirect
+Experiment(s):EBI-1143906<br />
+|-
+|
+Protein
+|
+ybdN<br />
+|
+|
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
+|-
+|
+Protein
+|
+yqjK<br />
+|
+|
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
+|-
+|
+Protein
+|
+racR<br />
+|
+|
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
+|-
+|
+Protein
+|
+nanE<br />
+|
+|
+PMID:16606699
+|
+Experiment(s):EBI-1143906<br />
+|-
+|
+Protein
+|
+dnaK<br />
+|
+|
+PMID:15690043
+|
+Experiment(s):EBI-880413, EBI-885840<br />
+|-
+|
+Protein
+|
+fabZ<br />
+|
+|
+PMID:15690043
+|
+Experiment(s):EBI-880413<br />
+|-
+|
+Protein
+|
+gltX<br />
+|
+|
+PMID:15690043
+|
+Experiment(s):EBI-880413<br />
+|-
+|
+Protein
+|
+pnp<br />
+|
+|
+PMID:15690043
+|
+Experiment(s):EBI-880413, EBI-883913, EBI-891089, EBI-885840<br />
+|-
+|
+Protein
+|
+yniC<br />
+|
+|
+PMID:15690043
+|
+Experiment(s):EBI-880413<br />
+|-
+|
+Protein
+|
+pinR<br />
+|
+|
+PMID:15690043
+|
+Experiment(s):EBI-885840<br />
+|-
+|
+Protein
+|
+rpsE<br />
+|
+|
+PMID:15690043
+|
+Experiment(s):EBI-885840<br />
+|-
+|
+Protein
+|
+pinR
 |
 |
+PMID:19402753
+|
+LCMS(ID Probability):99.6
 |-
 |
 Protein
 |
-[[yfeX:Gene_Product(s)|yfeX]]<br />
+Subunits of [[:Category:Complex:degradosome|degradosome]]
+|
+could be indirect
 |
-|[[PMID:16606699]]<ref name=PMID:16606699/>
 |
-Experiment(s):[http://www.ebi.ac.uk/iintact/search/do/search?searchString=EBI-1143906 EBI-1143906]<br />
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.M46aabd66df967&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=Product_interactions_table edit table] || || || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.M46aabd66df967&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=Product_interactions_table edit table]</span> || || || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.M46aabd66df967-->
-{{Product_interactions_help}}
 <!--Function_notes--></protect>
 ===Notes===
@@ Line 446: / Line 1,061: @@
 *
 ****************************************************************************************** -->{{Product_localization_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="X46aabd68a7ab7"  class=" tableEdit Product_localization_table"
 |- {{table heading style}}
-!|Compartment!!Description!!Evidence!!Notes
+!|Compartment!!Description!!Evidence!!Reference/Source!!Notes
 |-
 |
@@ Line 457: / Line 1,072: @@
 |
 From EcoCyc<ref name='LIB:EcoCyc11.1'/>
+|
+|-
+|
+Cytoplasm
+|
+|
+PMID:9298646, PMID:8610017, PMID:9600841, PMID:9740056, PMID:9732527, PMID:12035760
+|
+[http://www.york.ac.uk/res/thomas/Echolocation.cfm?EB_SubLocID=EB0254 EchoLocation:eno]
+|
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.X46aabd68a7ab7&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=Product_localization_table edit table] || || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.X46aabd68a7ab7&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=Product_localization_table edit table]</span> || || || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.X46aabd68a7ab7-->
-{{Product_localization_help}}
 <protect><!--Localization_notes--></protect>
@@ Line 480: / Line 1,108: @@
 *
 ****************************************************************************************** -->{{Product_physical_properties_help}}
-{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{|   id="C46aabd6a477d5"  class=" tableEdit Product_phys_prop_table"
+|-
+!align=left {{table heading style}} |Name
+||
 |-
@@ Line 494: / Line 1,126: @@
 DAGYTAVISH RSGETEDATI ADLAVGTAAG QIKTGSMSRS DRVAKYNQLI RIEEALGEKA
 PYNGRKEIKG QA</pre>
+|-
+!align=left {{table heading style}} |Length
+||
 |-
 !align=left {{table heading style}} |Mol. Wt
 ||
-.65 kDa (calc) <ref name='LIB:EcoCyc10.6'/>
+.656 kDa
 |-
 !align=left {{table heading style}} |pI
 ||
-.64<ref name='LIB:EcoCyc10.6'/>
+.3 (calculated)
 |-
 !align=left {{table heading style}} |Extinction coefficient
 ||
-- 22015 (calc based on 11 Y, 1 W, and 1 C residues)
+,890 - 22,015 (calc based on 11 Y, 1 W, and 1 C residues)
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.C46aabd6a477d5&page=25894&pagename={{FULLPAGENAMEE}}&type=1&template=Product_phys_prop_table edit table] ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.C46aabd6a477d5&page=25894&pagename={{FULLPAGENAMEE}}&type=1&template=Product_phys_prop_table edit table]</span> ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.C46aabd6a477d5-->
-{{Product_physical_properties_help}}
-<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span>
-<!--box uid=421aa90e079fa326b6494f812ad13e79.25894.K46aabd6ab740f-->
+<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span><table>
+<tr align="left" valign="top">
+<td><!--box uid=421aa90e079fa326b6494f812ad13e79.25894.K46aabd6ab740f-->
 <!--
 ******************************************************************************************
@@ Line 521: / Line 1,158: @@
 *
 ****************************************************************************************** -->{{Product_domains_motifs_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="K46aabd6ab740f"  class=" tableEdit Product_motif_table dataTable"
 |- {{table heading style}}
-!|Type!!Residues!!Description!!Notes
+!|Type!!Residues!!Description!!Notes!!References
+|-
+|
+Initiator Methionine
+|
+|
+Removed
+|
+[http://www.uniprot.org/uniprot/P0A6P9#section_features UniProt:P0A6P9]
+|
+|-
+|
+Modification Site
+|
+|
+phosphorylation site at T375
+|
+[[PHOSIDA#p-values|probability less than 75%]]
+|
+PMID:17938405
+|-
+|
+Modification Site
+|
+|
+phosphorylation site at T379
+|
+[[PHOSIDA#p-values|probability less than 75%]]
+|
+PMID:17938405
+|-
+|
+Modification Site
+|
+|
+phosphorylation site at S372
+|
+[[PHOSIDA#p-values|probability less than 75%]]
+|
+PMID:17938405
+|-
+|
+Domain
+|
+..431
+|
+[http://pfam.janelia.org/family/PF00113 PF00113  Enolase, C-terminal TIM barrel domain]
+|
+|
+PMID:19920124
+|-
+|
+Domain
+|
+..134
+|
+[http://pfam.janelia.org/family/PF03952 PF03952  Enolase, N-terminal domain]
+|
-|-class='sortbottom'
+|
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.K46aabd6ab740f&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=Product_motif_table edit table] || || ||
+PMID:19920124
+|- class="tableEdit_footer"
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.K46aabd6ab740f&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=Product_motif_table edit table]</span> || || || ||
 |}
-<!--box uid=421aa90e079fa326b6494f812ad13e79.25894.K46aabd6ab740f-->
+<!--box uid=421aa90e079fa326b6494f812ad13e79.25894.K46aabd6ab740f--></td>
-{{Product_domains_motifs_help}}
+<td>
+<!-- motifs column 2-->
+<motif_map/>
+</td>
+</tr>
+</table>
-<span id="Structure"></span><big>'''Structure'''</big>
+<table><tr valign='top'><td>
+<span id='Structure'></span><big>'''Structure'''</big><br />
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.G46a85415ed966-->
 <!--
@@ Line 539: / Line 1,249: @@
 *
 ****************************************************************************************** -->{{Product_structure_help}}
-{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{|   id="G46a85415ed966"  class=" tableEdit Product_structure_table"
 |-
 !align=left {{table heading style}} |Structures
 ||
-<beststructure>eno
+<beststructure>
-</beststructure>
+gene=eno
+taxon=562,83333
+</beststructure>
 |-
 !align=left {{table heading style}} |Models
 ||
 View models at:
-* [http://dragon.bio.purdue.edu/ecolpredict2/localsearch/cgi-bin/search3.cgi?q=eno&sub=keywordSearc EcoliPredict]
+* [http://www.proteinmodelportal.org/query/uniprot/P0A6P9 Protein Model Portal]
-* [http://modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=eno&organism=562&organismtext= ModBase]
+* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P0A6P9 PSI-PRED (P0A6P9)]
-* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
+* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P0A6P9 Genomes TO Protein (P0A6P9)] (GTOP)
-* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
-* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.G46a85415ed966&page=25894&pagename={{FULLPAGENAMEE}}&type=1&template=Product_structure_table edit table] ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.G46a85415ed966&page=25894&pagename={{FULLPAGENAMEE}}&type=1&template=Product_structure_table edit table]</span> ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.G46a85415ed966-->
-{{Product_structure_help}}
-<!--Structure_notes--></protect>
+</td><td></protect>
+==== Structure figures ====
+<protect><!--          ***** PLEASE DO NOT EDIT BELOW THIS LINE *****         -->
+</td><tr><table><!--Structure_notes--></protect>
 ===Notes===
@@ Line 576: / Line 1,305: @@
 *
 ****************************************************************************************** -->{{Product_resources_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="N46aabd6b81773"  class=" tableEdit Product_resource_table"
 |- {{table_heading_style}}
 !|Resource type!!Source!!Notes/Reference
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.N46aabd6b81773&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=Product_resource_table edit table] || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.N46aabd6b81773&page=25894&pagename={{FULLPAGENAMEE}}&type=&template=Product_resource_table edit table]</span> || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.N46aabd6b81773-->
-{{Product_resources_help}}
 <protect><!--Resources_notes--></protect>
 ===Notes===
@@ Line 598: / Line 1,327: @@
 *
 ****************************************************************************************** -->{{Gene_accessions_help}}
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="E46aabd6be03f3"  class=" tableEdit Gene_accessions_table"
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |-
 |
-[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
 |
-[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=ENOLASE-MONOMER EcoCyc:ENOLASE-MONOMER]
+[http://www.ncbi.nlm.nih.gov/protein/16130686 GI:16130686]
 |
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/NP_417259.1 GeneID:945032]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[ASAP]]
+|
+ASAP:ABE-0009110
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[http://www.pir.uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+|
+[http://www.uniprot.org/uniprot/P0A6P9 UniProtKB/Swiss-Prot:P0A6P9]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[EcoCyc]]
+|
+EcoCyc:EG10258
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+[[EcoGene]]
 |
-[[uniprot:P0A6P9|UniProt:P0A6P9]]
+EcoGene:EG10258
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/gene NCBI (Gene)] ([[NCBI (Gene)|EcoliWiki Page]])
 |
-[http://pfam.sanger.ac.uk/family?acc=PF03952 PFAM:PF03952]
+[http://www.ncbi.nlm.nih.gov/gene?term=945032 GeneID:945032]
 |
+Escherichia coli str. K-12 substr. MG1655
 |-
 |
-[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])
+[[RegulonDB]]
 |
-[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_417259 RefSeq:NP_417259]
+RegulonDB:ECK120000252
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://modbase.compbio.ucsf.edu ModBase] ([[ModBase|EcoliWiki Page]])
+[[EchoBASE]]
 |
-[http://salilab.org/modbase/searchbyid?databaseID=P0A6P9 ModBase:P0A6P9]
+EchoBASE:EB0254
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.E46aabd6be03f3&page=25894&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.E46aabd6be03f3&page=25894&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.E46aabd6be03f3-->
-{{Product_accessions_help}}
 <protect><!--Accessions_notes--></protect>
 ===Notes===
@@ Line 655: / Line 1,412: @@
 *
 ****************************************************************************************** -->
-{|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="A46a8541966693"  class=" tableEdit Links_table"
 |- {{table_heading_style}}
 !|Name!!URL!!Comments
-|-class='sortbottom'
+|- class="tableEdit_footer"
-|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.A46a8541966693&page=25894&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] || ||
+|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.25894.A46a8541966693&page=25894&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.25894.A46a8541966693-->
-{{Links_help}}
@@ Line 671: / Line 1,428: @@
 {{BacktoTop}}
 {{RefHelp}}
-<references/>
+<references />
 __NOTOC__
-</noinclude>
 ===Categories===
 {{BacktoTop}}
 [[Category:Proteins]]
-[[Category:GO:0005737_!_cytoplasm]][[Category:GO:0006096_!_glycolysis]][[Category:GO:0009061_!_anaerobic respiration]][[Category:GO:0006094_!_gluconeogenesis]][[Category:Complex:enolase]][[Category:Complex:degradosome]][[Category:Location:cytoplasm]]
+[[Category:RefGenome_Annotated_Gene]]
-[[Category:Pathway:Glycolysis]]
-[[Category: GO Annotation by EcoliWiki Team]]

eno:Gene Product(s): Difference between revisions

Latest revision as of 04:21, 19 May 2019

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

Search