envZ:Gene Product(s): Difference between revisions

Standard name	EnvZ
Synonyms	sensory histidine kinase in two-component regulatory system with OmpR^[1], B3404^[2]^[1], Tpo^[2]^[1], Kmt^[2]^[1], OmpB^[2]^[1], PerA^[2]^[1], EnvZ^[2]^[1], osmolarity sensor kinase-phosphotransferase EnvZ^[2]^[1], unphosphorylated osmolarity sensor kinase-phosphotransferase EnvZ^[2]^[1], unmodified osmolarity sensor kinase-phosphotransferase EnvZ^[2]^[1] , cpr, ECK3391, JW3367, ompB, perA, tpo, b3404
Product description	EnvZ^[2]^[3]; Component of EnvZ^[2]^[3] Osmosensor histidine protein kinase/phosphatase; regulates production of outer membrane proteins; dimeric^[4]
EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
	GO:0016310	phosphorylation	PMID:2558046^[5]	IDA: Inferred from Direct Assay		P	Figure 1	complete
	GO:0000155	two-component sensor activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003661	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000155	two-component sensor activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR005467	F	Seeded from EcoCyc (v14.0)	complete
	GO:0000160	two-component signal transduction system (phosphorelay)	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0902	P	Seeded from EcoCyc (v14.0)	complete
	GO:0000166	nucleotide binding	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0547	F	Seeded from EcoCyc (v14.0)	complete
	GO:0004673	protein histidine kinase activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR005467	F	Seeded from EcoCyc (v14.0)	complete
	GO:0004673	protein histidine kinase activity	GOA:spec GO_REF:0000003	IEA: Inferred from Electronic Annotation	EC:2.7.13.3	F	Seeded from EcoCyc (v14.0)	complete
	GO:0004871	signal transducer activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003660	F	Seeded from EcoCyc (v14.0)	complete
	GO:0004871	signal transducer activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR009082	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005524	ATP binding	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003594	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005524	ATP binding	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0067	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005886	plasma membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0997	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005886	plasma membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-1003	C	Seeded from EcoCyc (v14.0)	complete
	GO:0007165	signal transduction	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003660	P	Seeded from EcoCyc (v14.0)	complete
	GO:0007165	signal transduction	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003661	P	Seeded from EcoCyc (v14.0)	complete
	GO:0046777	protein amino acid autophosphorylation	PMID:2558046^[5]	IDA: Inferred from Direct Assay		P	Figure 1	complete
	GO:0007165	signal transduction	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR005467	P	Seeded from EcoCyc (v14.0)	complete
	GO:0007165	signal transduction	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR009082	P	Seeded from EcoCyc (v14.0)	complete
	GO:0016020	membrane	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003661	C	Seeded from EcoCyc (v14.0)	complete
	GO:0000160	two-component signal transduction system (phosphorelay)	PMID:2558046^[5]	IDA: Inferred from Direct Assay		P	with NRI- Figure 2	complete
	GO:0016020	membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0472	C	Seeded from EcoCyc (v14.0)	complete
	GO:0006470	protein amino acid dephosphorylation	PMID:2558046^[5]	IDA: Inferred from Direct Assay		P	dephosphorylates OmpR- Figure 7	complete
	GO:0016021	integral to membrane	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003660	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016021	integral to membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0812	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016021	integral to membrane	GO_REF:0000023	IEA: Inferred from Electronic Annotation	SP_SL:SL-9909	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016301	kinase activity	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0418	F	Seeded from EcoCyc (v14.0)	complete
	GO:0016310	phosphorylation	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR004358	P	Seeded from EcoCyc (v14.0)	complete
	GO:0016740	transferase activity	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0808	F	Seeded from EcoCyc (v14.0)	complete
	GO:0016772	transferase activity, transferring phosphorus-containing groups	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR004358	F	Seeded from EcoCyc (v14.0)	complete
	GO:0018106	peptidyl-histidine phosphorylation	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR005467	P	Seeded from EcoCyc (v14.0)	complete
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
Protein	Subunits of EnvZ	could be indirect
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Reference/Source
plasma membrane	C-terminus localized in the cytoplasm with 2 predicted transmembrane domains	Daley et al. (2005) ^[6]
plasma membrane			From EcoCyc^[3]
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	at EcoCyc MRRLRFSPRS SFARTLLLIV TLLFASLVTT YLVVLNFAIL PSLQQFNKVL AYEVRMLMTD KLQLEDGTQL VVPPAFRREI YRELGISLYS NEAAEEAGLR WAQHYEFLSH QMAQQLGGPT EVRVEVNKSS PVVWLKTWLS PNIWVRVPLT EIHQGDFSPL FRYTLAIMLL AIGGAWLFIR IQNRPLVDLE HAALQVGKGI IPPPLREYGA SEVRSVTRAF NHMAAGVKQL ADDRTLLMAG VSHDLRTPLT RIRLATEMMS EQDGYLAESI NKDIEECNAI IEQFIDYLRT GQEMPMEMAD LNAVLGEVIA AESGYEREIE TALYPGSIEV KMHPLSIKRA VANMVVNAAR YGNGWIKVSS GTEPNRAWFQ VEDDGPGIAP EQRKHLFQPF VRGDSARTIS GTGLGLAIVQ RIVDNHNGML ELGTSERGGL SIRAWLPVPV TRAQGTTKEG
Length	450
Mol. Wt	50.334 kDa
pI	6.8 (calculated)
Extinction coefficient	61,880 - 62,005 (calc based on 12 Y, 8 W, and 1 C residues)
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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	References
Domain	160..229	PF00672 HAMP domain	PMID:19920124^[7]
Domain	332..439	PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	PMID:19920124^[7]
Domain	233..293	PF00512 His Kinase A (phosphoacceptor) domain	PMID:19920124^[7]
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<motif_map/>

Click the image to view raw output from TMHMM.

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=envZ taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
NCBI (Protein) (EcoliWiki Page)	GI:16131281	Escherichia coli str. K-12 substr. MG1655
NCBI (Protein) (EcoliWiki Page)	GeneID:947272	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:ABE-0011108	Escherichia coli str. K-12 substr. MG1655
UniProt (EcoliWiki Page)	UniProtKB/Swiss-Prot:P0AEJ4	Escherichia coli str. K-12 substr. MG1655
EcoCyc	EcoCyc:EG10269	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:EG10269	Escherichia coli str. K-12 substr. MG1655
NCBI (Gene) (EcoliWiki Page)	GeneID:947272	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:ECK120000263	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:EB0265	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

↑ ^1.00 ^1.01 ^1.02 ^1.03 ^1.04 ^1.05 ^1.06 ^1.07 ^1.08 ^1.09 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.00 ^2.01 ^2.02 ^2.03 ^2.04 ^2.05 ^2.06 ^2.07 ^2.08 ^2.09 ^2.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
↑ ^5.0 ^5.1 ^5.2 ^5.3 Igo, MM et al. (1989) Phosphorylation and dephosphorylation of a bacterial transcriptional activator by a transmembrane receptor. Genes Dev. 3 1725-34 PubMed
↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed
↑ ^7.0 ^7.1 ^7.2 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

envZ:Gene Product(s): Difference between revisions

Latest revision as of 04:01, 19 May 2019

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

@@ Line 35: / Line 35: @@
 *
 ****************************************************************************************** -->{{Product_nomenclature_help}}
-{|  id="O46aae729c67d4"  class=" tableEdit Product_nomenclature_table"
+{|   id="O46aae729c67d4"  class=" tableEdit Product_nomenclature_table"
 |-
@@ Line 44: / Line 44: @@
 !align=left {{table heading style}} |Synonyms
 ||
-sensory histidine kinase in two-component regulatory system with OmpR<ref name='LIB:Riley_2006'/>, B3404<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tpo<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Kmt<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PerA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unphosphorylated osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unmodified osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
+''sensory histidine kinase in two-component regulatory system with OmpR<ref name='LIB:Riley_2006'/>, B3404<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tpo<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Kmt<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PerA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unphosphorylated osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unmodified osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , cpr, ECK3391, JW3367, ompB, perA, tpo, b3404''
 |-
 !align=left {{table heading style}} |Product description
@@ Line 74: / Line 74: @@
 ******************************************************************************************
 *
-*   ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
+** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 *
 ****************************************************************************************** -->{{Product_GO_help}}
-{|   id="H46aae72b6b897"  class=" tableEdit GO_table_product dataTable"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="H46aae72b6b897"  class=" tableEdit GO_table_product dataTable"
 |- {{table_heading_style}}
-!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
+!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
 |-
 |
 |
-GO:0018106
+GO:0016310
 |
-peptidyl-histidine phosphorylation
+phosphorylation
 |
-GO_REF:0000002
+PMID:2558046
 |
-IEA: Inferred from Electronic Annotation
+IDA: Inferred from Direct Assay
 |
-InterPro:IPR005467
 |
 P
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Figure 1
 |
 complete
@@ Line 103: / Line 103: @@
 |
-GO:0016772
+GO:0000155
 |
-transferase activity, transferring phosphorus-containing groups
+two-component sensor activity
 |
-GO_REF:0000002
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR004358
+InterPro:IPR003661
 |
 F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 122: / Line 122: @@
 |
-GO:0016740
+GO:0000155
 |
-transferase activity
+two-component sensor activity
 |
-GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0808
+InterPro:IPR005467
 |
 F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 141: / Line 141: @@
 |
-GO:0016310
+GO:0000160
+|
+two-component signal transduction system (phosphorelay)
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0902
 |
-phosphorylation
+P
 |
-PMID:2558046
+Seeded from [[EcoCyc]] (v14.0)
 |
-IDA: Inferred from Direct Assay
+complete
+|-
 |
 |
-P
+GO:0000166
+|
+nucleotide binding
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0547
+|
+F
 |
-Figure 1
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 160: / Line 179: @@
 |
-GO:0016301
+GO:0004673
 |
-kinase activity
+protein histidine kinase activity
 |
-GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0418
+InterPro:IPR005467
 |
 F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 179: / Line 198: @@
 |
-GO:0016021
+GO:0004673
 |
-integral to membrane
+protein histidine kinase activity
 |
-GO_REF:0000004
+GOA:spec<br />GO_REF:0000003
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0812
+EC:2.7.13.3
 |
-C
+F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 198: / Line 217: @@
 |
-GO:0016020
+GO:0004871
 |
-membrane
+signal transducer activity
 |
-GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000004<br />GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR003660<br />InterPro:IPR003661<br />SP_KW:KW-0397<br />SP_KW:KW-0472
+InterPro:IPR003660
 |
-C
+F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 217: / Line 236: @@
 |
-GO:0007165
+GO:0004871
 |
-signal transduction
+signal transducer activity
 |
-GO_REF:0000002<br />GO_REF:0000002<br />GO_REF:0000002
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR003660<br />InterPro:IPR003661<br />InterPro:IPR009082
+InterPro:IPR009082
 |
-P
+F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 240: / Line 259: @@
 ATP binding
 |
-GO_REF:0000002
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
@@ Line 248: / Line 267: @@
 F
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 255: / Line 274: @@
 |
-GO:0004871
+GO:0005524
 |
-signal transducer activity
+ATP binding
 |
-GO_REF:0000002<br />GO_REF:0000002
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR003660<br />InterPro:IPR009082
+SP_KW:KW-0067
 |
 F
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 274: / Line 293: @@
 |
-GO:0004673
+GO:0005886
+|
+plasma membrane
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0997
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
+|
+|
+GO:0005886
 |
-protein histidine kinase activity
+plasma membrane
 |
-GO_REF:0000002<br />GO_REF:0000003
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
 IEA: Inferred from Electronic Annotation
 |
-InterPro:IPR005467<br />EC:2.7.13.3
+SP_KW:KW-1003
 |
-F
+C
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 293: / Line 331: @@
 |
-GO:0000160
+GO:0007165
 |
-two-component signal transduction system (phosphorelay)
+signal transduction
 |
-GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-902
+InterPro:IPR003660
 |
 P
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 312: / Line 350: @@
 |
-GO:0000155
+GO:0007165
 |
-two-component sensor activity
+signal transduction
 |
-GO_REF:0000002
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
@@ Line 322: / Line 360: @@
 InterPro:IPR003661
 |
-F
+P
 |
-Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
 |-
 |
 |
-GO:0006464
+GO:0046777
 |
-protein modification process
+protein amino acid autophosphorylation
 |
+PMID:2558046
 |
+IDA: Inferred from Direct Assay
 |
 |
 P
 |
-Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
+Figure 1
 |
-required fields missing
+complete
 |-
 |
 |
-GO:0000166
+GO:0007165
 |
-nucleotide binding
+signal transduction
 |
-GO_REF:0000004
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0547
+InterPro:IPR005467
 |
-F
+P
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 369: / Line 407: @@
 |
-GO:0005515
+GO:0007165
 |
-protein binding
+signal transduction
 |
-PMID:11973328
+GOA:interpro<br />GO_REF:0000002
 |
-IPI: Inferred from Physical Interaction
+IEA: Inferred from Electronic Annotation
 |
-UniProtKB:P0AA16
+InterPro:IPR009082
 |
-F
+P
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 388: / Line 426: @@
 |
-GO:0005886
+GO:0016020
 |
-plasma membrane
+membrane
 |
-GO_REF:0000004<br />GO_REF:0000004<br />GO_REF:0000023
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
 |
-SP_KW:KW-0997<br />SP_KW:KW-1003<br />SP_SL:SL-0037
+InterPro:IPR003661
 |
 C
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
 |-
 |
 |
-GO:0016485
+GO:0000160
 |
-protein processing
+two-component signal transduction system (phosphorelay)
 |
+PMID:2558046
 |
+IDA: Inferred from Direct Assay
 |
 |
 P
 |
-Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
+with NRI- Figure 2
 |
-required fields missing
+complete
 |-
 |
 |
-GO:0016048
+GO:0016020
+|
+membrane
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-detection of temperature stimulus
+IEA: Inferred from Electronic Annotation
 |
-PMID:19432797
+SP_KW:KW-0472
 |
-IGI: Inferred from Genetic Interaction
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
+|
+complete
+|-
 |
-EcoliWiki:bamB
-EcoliWiki:degP
+|
+GO:0006470
+|
+protein amino acid dephosphorylation
+|
+PMID:2558046
+|
+IDA: Inferred from Direct Assay
+|
 |
 P
+|
+dephosphorylates OmpR- Figure 7
+|
+complete
+|-
 |
+|
+GO:0016021
+|
+integral to membrane
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR003660
+|
+C
+|
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 448: / Line 521: @@
 |
-GO:0071229
+GO:0016021
+|
+integral to membrane
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0812
 |
-cellular response to acid
+C
 |
-PMID:20380141
+Seeded from [[EcoCyc]] (v14.0)
 |
-IMP: Inferred from Mutant Phenotype
+complete
+|-
 |
 |
-P
+GO:0016021
+|
+integral to membrane
+|
+GO_REF:0000023
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_SL:SL-9909
+|
+C
 |
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 467: / Line 559: @@
 |
-GO:0046777
+GO:0016301
 |
-protein amino acid autophosphorylation
+kinase activity
 |
-PMID:2558046
+GOA:spkw<br />SP_KW:GO_REF:0000004
 |
-IDA: Inferred from Direct Assay
+IEA: Inferred from Electronic Annotation
 |
+SP_KW:KW-0418
 |
-P
+F
 |
-Figure 1
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 490: / Line 582: @@
 phosphorylation
 |
-GO_REF:0000002
+GOA:interpro<br />GO_REF:0000002
 |
 IEA: Inferred from Electronic Annotation
@@ Line 498: / Line 590: @@
 P
 |
-Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 505: / Line 597: @@
 |
-GO:0000160
+GO:0016740
+|
+transferase activity
+|
+GOA:spkw<br />SP_KW:GO_REF:0000004
+|
+IEA: Inferred from Electronic Annotation
+|
+SP_KW:KW-0808
 |
-two-component signal transduction system (phosphorelay)
+F
 |
-PMID:2558046
+Seeded from [[EcoCyc]] (v14.0)
 |
-IDA: Inferred from Direct Assay
+complete
+|-
 |
 |
-P
+GO:0016772
+|
+transferase activity, transferring phosphorus-containing groups
+|
+GOA:interpro<br />GO_REF:0000002
+|
+IEA: Inferred from Electronic Annotation
+|
+InterPro:IPR004358
+|
+F
 |
-with NRI- Figure 2
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
@@ Line 524: / Line 635: @@
 |
-GO:0006470
+GO:0018106
 |
-protein amino acid dephosphorylation
+peptidyl-histidine phosphorylation
 |
-PMID:2558046
+GOA:interpro<br />GO_REF:0000002
 |
-IDA: Inferred from Direct Assay
+IEA: Inferred from Electronic Annotation
 |
+InterPro:IPR005467
 |
 P
 |
-dephosphorylates OmpR- Figure 7
+Seeded from [[EcoCyc]] (v14.0)
 |
 complete
 |- class="tableEdit_footer"
-|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.27298.H46aae72b6b897&page=27298&pagename={{FULLPAGENAMEE}}&type=&template=GO_table_product edit table]</span> || || || || || || || ||
+|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.27298.H46aae72b6b897&page=27298&pagename={{FULLPAGENAMEE}}&type=&template=GO_table_product edit table]</div> || || || || || || || ||
 |}
 <!--box uid=421aa90e079fa326b6494f812ad13e79.27298.H46aae72b6b897-->
@@ Line 553: / Line 664: @@
 *
 ****************************************************************************************** -->{{Product_interactions_help}}
-{|   id="O46aae731f0f6b"  class=" tableEdit Product_interactions_table dataTable"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="O46aae731f0f6b"  class=" tableEdit Product_interactions_table dataTable"
 |- {{table heading style}}
 !|Partner Type!!Partner!!Notes!!References!!Evidence
@@ Line 560: / Line 671: @@
 Protein
 |
-Subunits of [[:Category:Complex:EnvZ|EnvZ]]
+Subunits of EnvZ
 |
 could be indirect
@@ Line 585: / Line 696: @@
 *
 ****************************************************************************************** -->{{Product_localization_help}}
-{|   id="I46aae7334ab09"  class=" tableEdit Product_localization_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="I46aae7334ab09"  class=" tableEdit Product_localization_table"
 |- {{table heading style}}
-!|Compartment!!Description!!Evidence!!Source!!Notes
+!|Compartment!!Description!!Evidence!!Reference/Source!!Notes
 |-
 |
@@ Line 632: / Line 743: @@
 *
 ****************************************************************************************** -->{{Product_physical_properties_help}}
-{|  id="D46aae7354d737"  class=" tableEdit Product_phys_prop_table"
+{|   id="D46aae7354d737"  class=" tableEdit Product_phys_prop_table"
+|-
+!align=left {{table heading style}} |Name
+||
 |-
@@ Line 681: / Line 796: @@
 *
 ****************************************************************************************** -->{{Product_domains_motifs_help}}
-{|   id="R46aae735c337b"  class=" tableEdit Product_motif_table dataTable"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="R46aae735c337b"  class=" tableEdit Product_motif_table dataTable"
 |- {{table heading style}}
 !|Type!!Residues!!Description!!Notes!!References
+|-
+|
+Domain
+|
+..229
+|
+[http://pfam.janelia.org/family/PF00672 PF00672  HAMP domain]
+|
+|
+PMID:19920124
+|-
+|
+Domain
+|
+..439
+|
+[http://pfam.janelia.org/family/PF02518 PF02518  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase]
+|
+|
+PMID:19920124
+|-
+|
+Domain
+|
+..293
+|
+[http://pfam.janelia.org/family/PF00512 PF00512  His Kinase A (phosphoacceptor) domain]
+|
+|
+PMID:19920124
 |- class="tableEdit_footer"
@@ Line 709: / Line 857: @@
 *
 ****************************************************************************************** -->{{Product_structure_help}}
-{|  id="E46a8775bc43f2"  class=" tableEdit Product_structure_table"
+{|   id="E46a8775bc43f2"  class=" tableEdit Product_structure_table"
 |-
@@ Line 722: / Line 870: @@
 ||
 View models at:
-* [http://dragon.bio.purdue.edu/ecolpredict2/localsearch/cgi-bin/search3.cgi?q=recA EcoliPredict]
+* [http://www.proteinmodelportal.org/query/uniprot/P0AEJ4 Protein Model Portal]
-* [http://modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=recA&organism=562&organismtext= ModBase]
+* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P0AEJ4 PSI-PRED (P0AEJ4)]
-* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
+* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P0AEJ4 Genomes TO Protein (P0AEJ4)] (GTOP)
-* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
-* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
 |- class="tableEdit_footer"
@@ Line 767: / Line 913: @@
 *
 ****************************************************************************************** -->{{Product_resources_help}}
-{|   id="M46aae73698f0a"  class=" tableEdit Product_resource_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="M46aae73698f0a"  class=" tableEdit Product_resource_table"
 |- {{table_heading_style}}
 !|Resource type!!Source!!Notes/Reference
@@ Line 789: / Line 935: @@
 *
 ****************************************************************************************** -->{{Gene_accessions_help}}
-{|   id="S46aae73709088"  class=" tableEdit Gene_accessions_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="S46aae73709088"  class=" tableEdit Gene_accessions_table"
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |-
 |
-[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/16131281 GI:16131281]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
+|
+[http://www.ncbi.nlm.nih.gov/protein/NP_417863.1 GeneID:947272]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[ASAP]]
 |
-[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=ENVZ-MONOMER EcoCyc:ENVZ-MONOMER]
+ASAP:ABE-0011108
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
+|-
+|
+[http://www.pir.uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+|
+[http://www.uniprot.org/uniprot/P0AEJ4 UniProtKB/Swiss-Prot:P0AEJ4]
+|
+Escherichia coli str. K-12 substr. MG1655
+|-
+|
+[[EcoCyc]]
+|
+EcoCyc:EG10269
+|
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://swissmodel.expasy.org/repository/ SwissModel] ([[SwissModel|EcoliWiki Page]])
+[[EcoGene]]
 |
-[http://swissmodel.expasy.org/repository/smr.php?job=2&sptr_ac=P0AEJ4 SwissModel:P0AEJ4]
+EcoGene:EG10269
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
+[http://www.ncbi.nlm.nih.gov/gene NCBI (Gene)] ([[NCBI (Gene)|EcoliWiki Page]])
 |
-[[uniprot:P0AEJ4|UniProt:P0AEJ4]]
+[http://www.ncbi.nlm.nih.gov/gene?term=947272 GeneID:947272]
 |
+Escherichia coli str. K-12 substr. MG1655
 |-
 |
-[http://pfam.sanger.ac.uk/ PFAM] ([[PFAM|EcoliWiki Page]])
+[[RegulonDB]]
 |
-[http://pfam.sanger.ac.uk/family?acc=PF00672 PFAM:PF00672]
+RegulonDB:ECK120000263
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |-
 |
-[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])
+[[EchoBASE]]
 |
-[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_417863 RefSeq:NP_417863]
+EchoBASE:EB0265
 |
+''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 |- class="tableEdit_footer"
@@ Line 846: / Line 1,020: @@
 *
 ****************************************************************************************** -->
-{|   id="P46a877601886e"  class=" tableEdit Links_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="P46a877601886e"  class=" tableEdit Links_table"
 |- {{table_heading_style}}
 !|Name!!URL!!Comments
@@ Line 867: / Line 1,041: @@
 {{BacktoTop}}
 [[Category:Proteins]]
-[[Category:GO:0006464_!_protein modification process]][[Category:GO:0016485_!_protein processing]][[Category:Complex:EnvZ]][[Category:Location:plasma membrane]]

envZ:Gene Product(s): Difference between revisions

Latest revision as of 04:01, 19 May 2019

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

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