ptrA:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

ptrA

Gene Synonym(s)

ptr, ECK2817, b2821, JW2789[1][2], JW2789

Product Desc.

protease III[2][3]

Protease III, protease Pi, pitrilysin, zinc metalloprotease; perhaps some specificity for 10 to 30 residue peptides[4]

Product Synonyms(s)

protease III[1], B2821[2][1], PtrA[2][1], Ptr[2][1], Pitrilysin[2][1], Protease pi[2][1] , ECK2817, JW2789, ptr, b2821

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): recD[2], ptrA[2]

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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Gene

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

ptrA

Mnemonic

Protease III

Synonyms

ptr, ECK2817, b2821, JW2789[1][2], JW2789

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

63.67 minutes 

MG1655: 2956906..2954018
<gbrowseImage> name=NC_000913:2954018..2956906 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 2850615..2853503
<gbrowseImage> name=NC_012967:2850615..2853503 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 2841166..2844054
<gbrowseImage> name=NC_012759:2841166..2844054 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 2957540..2954652
<gbrowseImage> name=NC_007779:2954652..2957540 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 3050776..3047888
<gbrowseImage> name=NC_010473:3047888..3050776 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

ptrAH88R

H88R

Loss of activity and of Zn-binding

seeded from UniProt:P05458

ptrAE162Q

E162Q

20% loss of activity

seeded from UniProt:P05458

ptrAE169Q

E169Q

Loss of activity and of Zn-binding

seeded from UniProt:P05458

ptrAE204Q

E204Q

No loss of activity

seeded from UniProt:P05458

ptrAE91Q

E91Q

Loss of activity

seeded from UniProt:P05458

ptrAH92R

H92R

Loss of activity and of Zn-binding

seeded from UniProt:P05458

Δptr::kan

deletion

Biolog:respiration

unable to respire Acetate

PMID:16095938

Δptr::kan

deletion

Biolog:respiration

unable to respire Bromosuccinate

PMID:16095938

Δptr::kan

deletion

Biolog:respiration

unable to respire L-Asparagine

PMID:16095938

Δptr::kan

deletion

Biolog:respiration

unable to respire L-Aspartate

PMID:16095938

ΔptrA746::kan

PMID:16738554

CGSC:113619


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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

Plasmid clone

Shigen

PMID:16769691

Status:

Primer 1:

Primer 2:

10B6

Kohara Phage

Genobase

PMID:3038334

3G11

Kohara Phage

Genobase

PMID:3038334

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10786

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10786

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000777

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:947284

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0779

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009252

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

Ptr

Synonyms

protease III[1], B2821[2][1], PtrA[2][1], Ptr[2][1], Pitrilysin[2][1], Protease pi[2][1] , ECK2817, JW2789, ptr, b2821

Product description

protease III[2][3]

Protease III, protease Pi, pitrilysin, zinc metalloprotease; perhaps some specificity for 10 to 30 residue peptides[4]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

GO:0030288

outer membrane-bounded periplasmic space

C

Seeded from Riley et al 2006 [1].

Missing: evidence, reference

GO:0000287

magnesium ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0460

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011237

F

Seeded from EcoCyc (v14.0)

complete

GO:0003824

catalytic activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011249

F

Seeded from EcoCyc (v14.0)

complete

GO:0004222

metalloendopeptidase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001431

F

Seeded from EcoCyc (v14.0)

complete

GO:0004222

metalloendopeptidase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007863

F

Seeded from EcoCyc (v14.0)

complete

GO:0004222

metalloendopeptidase activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011765

F

Seeded from EcoCyc (v14.0)

complete

GO:0006508

proteolysis

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001431

P

Seeded from EcoCyc (v14.0)

complete

GO:0006508

proteolysis

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007863

P

Seeded from EcoCyc (v14.0)

complete

GO:0006508

proteolysis

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011765

P

Seeded from EcoCyc (v14.0)

complete

GO:0008233

peptidase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0645

F

Seeded from EcoCyc (v14.0)

complete

GO:0008237

metallopeptidase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0482

F

Seeded from EcoCyc (v14.0)

complete

GO:0008270

zinc ion binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007863

F

Seeded from EcoCyc (v14.0)

complete

GO:0008270

zinc ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0862

F

Seeded from EcoCyc (v14.0)

complete

GO:0016787

hydrolase activity

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0378

F

Seeded from EcoCyc (v14.0)

complete

GO:0042597

periplasmic space

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0574

C

Seeded from EcoCyc (v14.0)

complete

GO:0042597

periplasmic space

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0200

C

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011237

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011249

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc (v14.0)

complete

GO:0005737

cytoplasm

PMID:374413

IDA: Inferred from Direct Assay

C

complete

GO:0006508

proteolysis

PMID:374413

IDA: Inferred from Direct Assay

P

complete

GO:0004222

metalloendopeptidase activity

PMID:374413

IDA: Inferred from Direct Assay

F

complete

GO:0030288

outer membrane-bounded periplasmic space

PMID:7037737

IDA: Inferred from Direct Assay

C

complete

GO:0008270

zinc ion binding

PMID:1733942

IDA: Inferred from Direct Assay

F

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

rplW

PMID:16606699

Experiment(s):EBI-1144067

Protein

acpS

PMID:16606699

Experiment(s):EBI-1144067

Protein

nadE

PMID:16606699

Experiment(s):EBI-1144067

Protein

rplB

PMID:16606699

Experiment(s):EBI-1144067

Protein

rplS

PMID:16606699

Experiment(s):EBI-1144067
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

Periplasm

PMID:15502359

EchoLocation:ptrA


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MPRSTWFKAL LLLVALWAPL SQAETGWQPI QETIRKSDKD NRQYQAIRLD NGMVVLLVSD
PQAVKSLSAL VVPVGSLEDP EAYQGLAHYL EHMSLMGSKK YPQADSLAEY LKMHGGSHNA
STAPYRTAFY LEVENDALPG AVDRLADAIA EPLLDKKYAE RERNAVNAEL TMARTRDGMR
MAQVSAETIN PAHPGSKFSG GNLETLSDKP GNPVQQALKD FHEKYYSANL MKAVIYSNKP
LPELAKMAAD TFGRVPNKES KKPEITVPVV TDAQKGIIIH YVPALPRKVL RVEFRIDNNS
AKFRSKTDEL ITYLIGNRSP GTLSDWLQKQ GLVEGISANS DPIVNGNSGV LAISASLTDK
GLANRDQVVA AIFSYLNLLR EKGIDKQYFD ELANVLDIDF RYPSITRDMD YVEWLADTMI
RVPVEHTLDA VNIADRYDAK AVKERLAMMT PQNARIWYIS PKEPHNKTAY FVDAPYQVDK
ISAQTFADWQ KKAADIALSL PELNPYIPDD FSLIKSEKKY DHPELIVDES NLRVVYAPSR
YFASEPKADV SLILRNPKAM DSARNQVMFA LNDYLAGLAL DQLSNQASVG GISFSTNANN
GLMVNANGYT QRLPQLFQAL LEGYFSYTAT EDQLEQAKSW YNQMMDSAEK GKAFEQAIMP
AQMLSQVPYF SRDERRKILP SITLKEVLAY RDALKSGARP EFMVIGNMTE AQATTLARDV
QKQLGADGSE WCRNKDVVVD KKQSVIFEKA GNSTDSALAA VFVPTGYDEY TSSAYSSLLG
QIVQPWFYNQ LRTEEQLGYA VFAFPMSVGR QWGMGFLLQS NDKQPSFLWE RYKAFFPTAE
AKLRAMKPDE FAQIQQAVIT QMLQAPQTLG EEASKLSKDF DRGNMRFDSR DKIVAQIKLL
TPQKLADFFH QAVVEPQGMA ILSQISGSQN GKAEYVHPEG WKVWENVSAL QQTMPLMSEK NE
Length

962

Mol. Wt

107.711 kDa

pI

6.0 (calculated)

Extinction coefficient

135,110 - 135,235 (calc based on 39 Y, 14 W, and 1 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

motif

1-23

UniProt Manual:Signal Peptides

UniProt:P05458

Domain

214..396

PF05193 Peptidase M16 inactive domain

PMID:19920124

Domain

681..858

PF05193 Peptidase M16 inactive domain

PMID:19920124

Domain

54..192

PF00675 Insulinase (Peptidase family M16)

PMID:19920124

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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=ptrA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16130725

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947284

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009252

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P05458

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG10786

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10786

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947284

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000777

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0779

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MG1655

227

molecules/cell/generation

  • Medium: MOPS Complete
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

140

molecules/cell/generation

  • Medium: MOPS Minimal
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

Protein

E. coli K-12 MG1655

229

molecules/cell/generation

  • Medium: MOPS Complete without Methionine
  • Temperature (°C): 37
  • Doubling time (min):
  • *Growth phase:
  • OD:
  • other:

Ribosome Profiling

PMID: 24766808

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Notes

Transcription and Transcriptional Regulation

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<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

recD

ptrA

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Figure courtesy of RegulonDB

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Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_000913:2956886..2956926 source=MG1655 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

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Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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<protect> Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b2821 (EcoliWiki Page)

NCBI GEO profiles for ptrA

microarray

GenExpDB:b2821 (EcoliWiki Page)

Summary of data for ptrA from multiple microarray studies

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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to ptrA Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG10786

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0779

Escherichia coli str. K-12 substr. MG1655

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2821

EcoGene

EcoGene:EG10786

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000777

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009252

Escherichia coli str. K-12 substr. MG1655

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Notes

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Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000016000 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000029041 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G41790 (score: 1.000; bootstrap: 100%)
  • AT3G57470 (score: 0.598)
  • AT1G06900 (score: 0.124)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000026332 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000028219 (score: 0.112)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00030925 (score: 1.000; bootstrap: 100%)
  • WBGene00036799 (score: 0.086)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00018426 (score: 1.000; bootstrap: 100%)
  • WBGene00015359 (score: 0.739)
  • WBGene00013492 (score: 0.719)
  • WBGene00015360 (score: 0.572)
  • WBGene00016185 (score: 0.412)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000011097 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000005707 (score: 0.101)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000011755 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0187681 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0001247 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18943-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000011103 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000017172 (score: 0.094)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000265986 (score: 1.000; bootstrap: 100%)
  • ENSP00000262680 (score: 0.109)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000030629 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000006305 (score: 0.097)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000008223 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000000998 (score: 0.096)

From Inparanoid:20070104

Mus musculus

  • MGI:96412 (score: 1.000; bootstrap: 100%)
  • MGI:1201386 (score: 0.133)

From Inparanoid:20070104

Oryza gramene

  • Q7XIH3 (score: 1.000; bootstrap: 100%)
  • Q7XIH2 (score: 0.831)
  • Q5ZCF2 (score: 0.516)
  • Q5ZCF0 (score: 0.469)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000004811 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000023342 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000010462 (score: 0.133)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YLR389C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPACUNK42c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000143715 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000160690 (score: 0.101)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003718001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000026642 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

PTR

From SHIGELLACYC

E. coli O157

PTR

From ECOO157CYC

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Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF05193 Peptidase M16 inactive domain

Pfam (EcoliWiki Page)

PF05193 Peptidase M16 inactive domain

Panther (EcoliWiki Page)

PTHR11851:SF67

Superfamily (EcoliWiki Page)

SUPERFAMILY:63411

Superfamily (EcoliWiki Page)

SUPERFAMILY:63411

Superfamily (EcoliWiki Page)

SUPERFAMILY:63411

Superfamily (EcoliWiki Page)

SUPERFAMILY:63411

Pfam (EcoliWiki Page)

PF00675 Insulinase (Peptidase family M16)

EcoCyc

EcoCyc:EG10786

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10786

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000777

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0779

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009252

Escherichia coli str. K-12 substr. MG1655

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Notes

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

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