ompF:Expression
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Overview
This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.
Cellular Levels
Molecule | Organism or Strain | Value | Units | Experimental Conditions | Assay used | Notes | Reference(s) |
---|---|---|---|---|---|---|---|
Protein |
E. coli K-12 MC4100 |
1.25E+03 |
molecules/cell |
|
emPAI |
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Protein |
E. coli K-12 EMG2 |
1980 |
molecules/cell |
|
Quantitative protein sequencing |
Spot ID: M25 |
|
Protein |
E. coli K-12 EMG2 |
2160 |
molecules/cell |
|
Quantitative protein sequencing |
Spot ID: M51 |
|
Protein |
E. coli K-12 EMG2 |
17600 |
molecules/cell |
|
Quantitative protein sequencing |
Spot ID: Ml54 |
|
Protein |
E. coli K-12 MG1655 |
88988 |
molecules/cell/generation |
|
Ribosome Profiling |
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Protein |
E. coli K-12 MG1655 |
71798 |
molecules/cell/generation |
|
Ribosome Profiling |
||
Protein |
E. coli K-12 MG1655 |
63340 |
molecules/cell/generation |
|
Ribosome Profiling |
||
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Notes
Transcription and Transcriptional Regulation
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Notes
This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.
There is a pleiotropic decrease in expression of ompF with the addition of procaine. [4]
High concentrations of sucrose decreases the amount of OmpF protein and regulates ompF gene expression. [5]
Translation and Regulation of Translation
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This picture shows the sequence around the N-terminus.
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Notes
This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.
Turnover and Regulation of Turnover
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Notes
This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.
Experimental
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Mutations Affecting Expression
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Allele Name | Mutation | Phenotype | Reference |
---|---|---|---|
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Expression Studies
See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.
Type | Reference | Notes |
---|---|---|
microarray |
NCBI GEO profiles for ompF | |
microarray |
Summary of data for ompF from multiple microarray studies | |
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Expression Resources
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Resource Name | Resource Type | Description | Source | Notes |
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Notes
Accessions Related to ompF Expression
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
Name | URL | Comments |
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References
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- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed
- ↑ 2.0 2.1 2.2 Link, AJ et al. (1997) Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12. Electrophoresis 18 1259-313 PubMed
- ↑ 3.0 3.1 3.2 Li, GW et al. (2014) Quantifying absolute protein synthesis rates reveals principles underlying allocation of cellular resources. Cell 157 624-35 PubMed
- ↑ Garrett, S et al. (1983) Isolation and characterization of chain-terminating nonsense mutations in a porin regulator gene, envZ. J. Bacteriol. 156 62-9 PubMed
- ↑ Ozawa, Y & Mizushima, S (1983) Regulation of outer membrane porin protein synthesis in Escherichia coli K-12: ompF regulates the expression of ompC. J. Bacteriol. 154 669-75 PubMed
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