ftsH:Gene

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

ftsH

Mnemonic

Filamentation, temperature sensitive

Synonyms

ftsH, ECK3167, b3178, JW3145, mrsC, tolZ, std, G528, hflB[1][2][3], hflB

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Notes

Location(s) and DNA Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

71.62 minutes 

MG1655: 3324957..3323023
<gbrowseImage> name=NC_000913:3323023..3324957 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 3260235..3262169
<gbrowseImage> name=NC_012967:3260235..3262169 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 3210171..3212105
<gbrowseImage> name=NC_012759:3210171..3212105 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 3326790..3324856
<gbrowseImage> name=AC_000091:3324856..3326790 source=W3110 preset=GeneLocation </gbrowseImage>


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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

hflB::Tn5KAN-I-SceI (FB21462)

Insertion at nt 1913 in Minus orientation

PMID:15262929[4]

E. coli Genome Project:FB21060

does not contain pKD46

hflB::Tn5KAN-I-SceI (FB21462)

Insertion at nt 1913 in Minus orientation

PMID:15262929[4]

E. coli Genome Project:FB21061

contains pKD46

ftsH0

CGSC:19371

xxx

xxxx

xxxxx

pmid: 2222222

ftsH1

Growth Phenotype

after 2 hours at 42C the mutation shows inability to form colonies and cell elongation and amount of PBP3 is slightly reduced

Phenotype is similar to ftsH101 at 37C and higher

PMID:1551860[5] PMID:8106504[6]

ftsH41

PMID:8576050[7]

ftsH101

allows significant export of PhoA across membrane

PMID:8576050[7] PMID:8106504[6]

partially suppressed by overproduction of HtpG also known as std101

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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

Plasmid clone

Shigen

PMID:16769691[8]

Status:

Primer 1:

Primer 2:

18H7

Kohara Phage

Genobase

PMID:3038334[9]

14F11

Kohara Phage

Genobase

PMID:3038334[9]

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG11506

EchoBASE (EcoliWiki Page)

EchoBASE:EB1469

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b3178

EcoGene (EcoliWiki Page)

EcoGene:EG11506

ECOO157CYC (EcoliWiki Page)

ECOO157CYC:HFLB

CGSC (EcoliWiki Page)

CGSC:735

ASAP (EcoliWikiPage)

ASAP:ABE-0010444

EcoCyc (EcoliWiki Page)

ECOCYC:EG11506

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:947690

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 Kang, Y et al. (2004) Systematic mutagenesis of the Escherichia coli genome. J. Bacteriol. 186 4921-30 PubMed
  5. ↑ Begg, KJ et al. (1992) Escherichia coli mutant Y16 is a double mutant carrying thermosensitive ftsH and ftsI mutations. J. Bacteriol. 174 2416-7 PubMed
  6. ↑ 6.0 6.1 Akiyama, Y et al. (1994) Involvement of FtsH in protein assembly into and through the membrane. I. Mutations that reduce retention efficiency of a cytoplasmic reporter. J. Biol. Chem. 269 5218-24 PubMed
  7. ↑ 7.0 7.1 Shirai, Y et al. (1996) Suppression of ftsH mutant phenotypes by overproduction of molecular chaperones. J. Bacteriol. 178 1141-5 PubMed
  8. ↑ Kitagawa, M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12 291-9 PubMed
  9. ↑ 9.0 9.1 Kohara, Y et al. (1987) The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell 50 495-508 PubMed

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