envZ:Gene Product(s): Difference between revisions
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{| | {| id="O46aae729c67d4" class=" tableEdit Product_nomenclature_table" | ||
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!align=left | !align=left |Standard name | ||
|| | || | ||
EnvZ | EnvZ | ||
|- | |- | ||
!align=left | !align=left |Synonyms | ||
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sensory histidine kinase in two-component regulatory system with OmpR<ref name='LIB:Riley_2006'/>, B3404<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tpo<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Kmt<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PerA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unphosphorylated osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unmodified osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | sensory histidine kinase in two-component regulatory system with OmpR<ref name='LIB:Riley_2006'/>, B3404<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tpo<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Kmt<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PerA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unphosphorylated osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, unmodified osmolarity sensor kinase-phosphotransferase EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left |Product description | ||
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EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | EnvZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Osmosensor histidine protein kinase/phosphatase; regulates production of outer membrane proteins; dimeric<ref name='LIB:EcoGene'/> | Osmosensor histidine protein kinase/phosphatase; regulates production of outer membrane proteins; dimeric<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left |EC number (for enzymes) | ||
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{| | {| id="H46aae72b6b897" class=" tableEdit GO_table_product dataTable" | ||
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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status | !|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status | ||
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{| | {| id="O46aae731f0f6b" class=" tableEdit Product_interactions_table" | ||
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{| | {| id="I46aae7334ab09" class=" tableEdit Product_localization_table" | ||
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{| | {| id="D46aae7354d737" class=" tableEdit Product_phys_prop_table" | ||
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!align=left | !align=left |Sequence | ||
|| | || | ||
[http://biocyc.org/ECOLI/sequence-aa?object=ENVZ-MONOMER at EcoCyc] | [http://biocyc.org/ECOLI/sequence-aa?object=ENVZ-MONOMER at EcoCyc] | ||
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ELGTSERGGL SIRAWLPVPV TRAQGTTKEG</pre> | ELGTSERGGL SIRAWLPVPV TRAQGTTKEG</pre> | ||
|- | |- | ||
!align=left | !align=left |Length | ||
|| | || | ||
450 | 450 | ||
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!align=left | !align=left |Mol. Wt | ||
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50.334 kDa | 50.334 kDa | ||
|- | |- | ||
!align=left | !align=left |pI | ||
|| | || | ||
6.8 (calculated) | 6.8 (calculated) | ||
|- | |- | ||
!align=left | !align=left |Extinction coefficient | ||
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61,880 - 62,005 (calc based on 12 Y, 8 W, and 1 C residues) | 61,880 - 62,005 (calc based on 12 Y, 8 W, and 1 C residues) | ||
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!align=left | !align=left |Structures | ||
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<beststructure> | <beststructure> | ||
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</beststructure> | </beststructure> | ||
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!align=left | !align=left |Models | ||
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View models at: | View models at: | ||
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* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP) | * [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP) | ||
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{| | {| id="M46aae73698f0a" class=" tableEdit Product_resource_table" | ||
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Revision as of 00:55, 9 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
EnvZ |
|---|---|
| Synonyms |
sensory histidine kinase in two-component regulatory system with OmpR[1], B3404[2][1], Tpo[2][1], Kmt[2][1], OmpB[2][1], PerA[2][1], EnvZ[2][1], osmolarity sensor kinase-phosphotransferase EnvZ[2][1], unphosphorylated osmolarity sensor kinase-phosphotransferase EnvZ[2][1], unmodified osmolarity sensor kinase-phosphotransferase EnvZ[2][1] |
| Product description |
Osmosensor histidine protein kinase/phosphatase; regulates production of outer membrane proteins; dimeric[4] |
| EC number (for enzymes) |
|
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0018106 |
peptidyl-histidine phosphorylation |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [5] |
complete | |||
| GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0016740 |
transferase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0016310 |
phosphorylation |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc [5] |
complete | |||
| GO:0016301 |
kinase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0016021 |
integral to membrane |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc 12.5 [6] |
complete | |||
| GO:0016020 |
membrane |
IEA: Inferred from Electronic Annotation |
InterPro:IPR003660 |
C |
Seeded from EcoCyc 12.5 [6] |
complete | ||
| GO:0007165 |
signal transduction |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [6] |
complete | |||
| GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [6] |
complete | |||
| GO:0004871 |
signal transducer activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0004673 |
protein histidine kinase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0000160 |
two-component signal transduction system (phosphorelay) |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc 12.5 [6] |
complete | |||
| GO:0000155 |
two-component sensor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc 12.5 [6] |
complete | |||
| GO:0006464 |
protein modification process |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| GO:0000166 |
nucleotide binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded from EcoCyc [5] |
complete | |||
| GO:0005886 |
plasma membrane |
IEA: Inferred from Electronic Annotation |
SP_KW:KW-0997 |
C |
Seeded from EcoCyc [5] |
complete | ||
| GO:0016485 |
protein processing |
P |
Seeded from EcoCyc 11.1[3]. |
required fields missing | ||||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
Subunits of EnvZ |
could be indirect |
| |
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Source | Notes |
|---|---|---|---|---|
|
plasma membrane |
C-terminus localized in the cytoplasm with 2 predicted transmembrane domains |
Daley et al. (2005) [8] |
||
|
plasma membrane |
From EcoCyc[3] |
| ||
| edit table |
Notes
Structure and Physical Properties
Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Sequence |
MRRLRFSPRS SFARTLLLIV TLLFASLVTT YLVVLNFAIL PSLQQFNKVL AYEVRMLMTD KLQLEDGTQL VVPPAFRREI YRELGISLYS NEAAEEAGLR WAQHYEFLSH QMAQQLGGPT EVRVEVNKSS PVVWLKTWLS PNIWVRVPLT EIHQGDFSPL FRYTLAIMLL AIGGAWLFIR IQNRPLVDLE HAALQVGKGI IPPPLREYGA SEVRSVTRAF NHMAAGVKQL ADDRTLLMAG VSHDLRTPLT RIRLATEMMS EQDGYLAESI NKDIEECNAI IEQFIDYLRT GQEMPMEMAD LNAVLGEVIA AESGYEREIE TALYPGSIEV KMHPLSIKRA VANMVVNAAR YGNGWIKVSS GTEPNRAWFQ VEDDGPGIAP EQRKHLFQPF VRGDSARTIS GTGLGLAIVQ RIVDNHNGML ELGTSERGGL SIRAWLPVPV TRAQGTTKEG |
|---|---|
| Length |
450 |
| Mol. Wt |
50.334 kDa |
| pI |
6.8 (calculated) |
| Extinction coefficient |
61,880 - 62,005 (calc based on 12 Y, 8 W, and 1 C residues) |
| edit table |
Domains/Motifs/Modification Sites
|
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
|
Structure
|
Structure figures
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.00 5.01 5.02 5.03 5.04 5.05 5.06 5.07 5.08 5.09 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
- ↑ 6.0 6.1 6.2 6.3 6.4 6.5 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Cai, SJ & Inouye, M (2002) EnvZ-OmpR interaction and osmoregulation in Escherichia coli. J Biol Chem 277 24155-61 PubMed
- ↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed
Categories
- GO:0018106 ! peptidyl-histidine phosphorylation
- GO:0016772 ! transferase activity, transferring phosphorus-containing groups
- GO:0016740 ! transferase activity
- GO:0016310 ! phosphorylation
- GO:0016301 ! kinase activity
- GO:0016021 ! integral component of membrane
- GO:0016020 ! membrane
- GO:0007165 ! signal transduction
- GO:0005524 ! ATP binding
- GO:0004871 ! obsolete signal transducer activity
- GO:0004673 ! protein histidine kinase activity
- GO:0000160 ! phosphorelay signal transduction system
- GO:0000155 ! phosphorelay sensor kinase activity
- GO:0006464 ! cellular protein modification process
- GO:0000166 ! nucleotide binding
- GO:0005515 ! protein binding
- GO:0005886 ! plasma membrane
- GO:0016485 ! protein processing
- TMHMM Prediction
- Proteins
- GO:0006464 ! protein modification process
- Complex:EnvZ
- Location:plasma membrane
