coaE:Gene Product(s): Difference between revisions

Standard name	CoaE
Synonyms	dephospho-CoA kinase^[1], B0103^[2]^[1], YacE^[2]^[1], CoaE^[2]^[1]
Product description	EG12312^[2]^[3] Dephospho-CoA kinase; final step in CoA synthesis^[4]
EC number (for enzymes)	2.7.1.24^[1]
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
	GO:0015937	coenzyme A biosynthetic process	GO_REF:0000004 GO_REF:0000020	IEA: Inferred from Electronic Annotation	SP_KW:KW-0173 HAMAP:MF_00376	P	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005737	cytoplasm	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0963	C	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0004140	dephospho-CoA kinase activity	GO_REF:0000003 GO_REF:0000020	IEA: Inferred from Electronic Annotation	EC:2.7.1.24 HAMAP:MF_00376	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0005524	ATP binding	GO_REF:0000002 GO_REF:0000004 GO_REF:0000020	IEA: Inferred from Electronic Annotation	InterPro:IPR001977 SP_KW:KW-0067 HAMAP:MF_00376	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0000166	nucleotide binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0547	F	Seeded from EcoCyc ^[6]	complete
	GO:0016740	transferase activity	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0808	F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0004140	dephospho-CoA kinase activity	PMID:11292795^[7]	IDA: Inferred from Direct Assay		F	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0015937	coenzyme A biosynthetic process	PMID:11292795^[7]	IDA: Inferred from Direct Assay		P	Seeded from EcoCyc 12.5 ^[5]	complete
	GO:0030288	outer membrane-bounded periplasmic space				C	Seeded from Riley et al 2006 ^[1].	required fields missing
	GO:0016301	kinase activity	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0418	F	Seeded from EcoCyc ^[6]	complete
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence	at EcoCyc MRYIVALTGG IGSGKSTVAN AFADLGINVI DADIIARQVV EPGAPALHAI ADHFGANMIA ADGTLQRRAL RERIFANPEE KNWLNALLHP LIQQETQHQI QQATSPYVLW VVPLLVENSL YKKANRVLVV DVSPETQLKR TMQRDDVTRE HVEQILAAQA TREARLAVAD DVIDNNGAPD AIASDVARLH AHYLQLASQF VSQEKP
Mol. Wt	22.62 kDa (calc) ^[2]
pI
Extinction coefficient	16960 (calc based on 4 Y, 2 W, and 0 C residues)
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Domains/Motifs/Modification Sites See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	Notes
Domain	4 - 200	DPCK	UniProt:P0A6I9
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Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

Models

View models at:

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:EG12312-MONOMER
PDB (EcoliWiki Page)	PDB:1N3B
UniProt (EcoliWiki Page)	UniProt:P0A6I9
PFAM (EcoliWiki Page)	PFAM:PF01121
RefSeq (EcoliWiki Page)	RefSeq:NP_414645
ModBase (EcoliWiki Page)	ModBase:P0A6I9
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
↑ ^5.0 ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 ^5.6 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^6.0 ^6.1 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
↑ ^7.0 ^7.1 Mishra, P et al. (2001) Identification of yacE (coaE) as the structural gene for dephosphocoenzyme A kinase in Escherichia coli K-12. J. Bacteriol. 183 2774-8 PubMed

coaE:Gene Product(s): Difference between revisions

Revision as of 22:11, 11 March 2009

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

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 Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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-GO:0016301
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-kinase activity
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-GO_REF:0000004
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-IEA: Inferred from Electronic Annotation
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 complete
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 required fields missing
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+GO:0016301
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+kinase activity
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+GO_REF:0000004
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+IEA: Inferred from Electronic Annotation
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+SP_KW:KW-0418
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+F
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+Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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+complete
 |-class='sortbottom'

coaE:Gene Product(s): Difference between revisions

Revision as of 22:11, 11 March 2009

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

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