aspA:Gene Product(s): Difference between revisions

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GO:0008797
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aspartate ammonia-lyase activity
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F
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Revision as of 16:26, 26 October 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

AspA product

Synonyms

aspartate ammonia-lyase product[1], B4139 product[2][1], AspA product[2][1]

Product description

AspA[2][3];

Component of ; aspartate ammonia-lyase[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0006520

amino acid metabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0006529

asparagine biosynthetic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0009089

lysine biosynthetic process via diaminopimelate

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0008797

aspartate ammonia-lyase activity

F

required field missing

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Interactions

Partner Type Partner Notes

Protein

Subunits of aspartate ammonia-lyase

could be indirect

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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MCLKQIIGSL KKKVHMSNNI RIEEDLLGTR EVPADAYYGV HTLRAIENFY ISNNKISDIP
EFVRGMVMVK KAAAMANKEL QTIPKSVANA IIAACDEVLN NGKCMDQFPV DVYQGGAGTS
VNMNTNEVLA NIGLELMGHQ KGEYQYLNPN DHVNKCQSTN DAYPTGFRIA VYSSLIKLVD
AINQLREGFE RKAVEFQDIL KMGRTQLQDA VPMTLGQEFR AFSILLKEEV KNIQRTAELL
LEVNLGATAI GTGLNTPKEY SPLAVKKLAE VTGFPCVPAE DLIEATSDCG AYVMVHGALK
RLAVKMSKIC NDLRLLSSGP RAGLNEINLP ELQAGSSIMP AKVNPVVPEV VNQVCFKVIG
NDTTVTMAAE AGQLQLNVME PVIGQAMFES VHILTNACYN LLEKCINGIT ANKEVCEGYV
YNSIGIVTYL NPFIGHHNGD IVGKICAETG KSVREVVLER GLLTEAELDD IFSVQNLMHP
AYKAKRYTDE SEQ
Mol. Wt

52.36 kDa (calc) [2]

pI
Extinction coefficient

23840 - 25340 (calc based on 16 Y, 0 W, and 12 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes

X-RAY DIFFRACTION

Escherichia coli

1JSW NATIVE L-ASPARTATE AMMONIA LYASE

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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:ASPARTASE-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0AC38

PFAM (EcoliWiki Page)

PFAM:PF00206

RefSeq (EcoliWiki Page)

RefSeq:NP_418562

ModBase (EcoliWiki Page)

ModBase:P0AC38

PDB (EcoliWiki Page)

PDB:1JSW

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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