mreB:Expression: Difference between revisions

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!|Molecule!!Organism or Strain!!Cellular level!!Units!!Medium!!Temperature °C!!Other (e.g. anaerobic)!!Growth rate!!Assay used!!Notes!!Reference(s)
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emPAI
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PMID:18304323
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quantitative western
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PMID:14517265
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quantitative western
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Revision as of 16:28, 27 October 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)

Protein

E. coli K-12 MC4100

1.49E+03

molecules/cell

median data from rich and minimal media

37

Protein

E. coli K-12 MC1000

17,000

molecules/cell

AB glycerol medium supplemented with 0.025% casamino acids (slowly growing cells)

30°C

Protein

E. coli K-12 MC1000

40,000

molecules/cell

rapidly growing cells


Notes

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

mreBCD-yhdE-rng

Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Identification of transcription start sites and different levels of mreB and mreBCD transcripts.[1]

Translation and Regulation of Translation

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<gbrowseImage> name=NC_000913:3399089..3399129 source=ecoli flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.


Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference


Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b3251 (EcoliWiki Page)

NCBI GEO profiles for mreB

microarray

GenExpDB:b3251 (EcoliWiki Page)

Summary of data for mreB from multiple microarray studies


Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

<protect>

Notes

Accessions Related to mreB Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG10608

EchoBASE (EcoliWiki Page)

EchoBASE:EB0603

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b3251

EcoGene (EcoliWiki Page)

EcoGene:EG10608



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Wachi, M et al. (2006) Transcriptional analysis of the Escherichia coli mreBCD genes responsible for morphogenesis and chromosome segregation. Biosci. Biotechnol. Biochem. 70 2712-9 PubMed

Categories

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