mreB:Expression: Difference between revisions

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Table edited by Siegele via TableEdit
Table edited by Siegele via TableEdit
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Protein
Protein
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|
E. coli K-12
E. coli K-12 MC1000
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|
17,000
17,000
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AB glycerol medium supplemented with 0.025% casamino acids (slowly growing cells)
AB glycerol medium supplemented with 0.025% casamino acids (slowly growing cells)
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|
 
30°C
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|


Line 89: Line 89:
Protein
Protein
|
|
E. coli K-12
E. coli K-12 MC1000
|
|
40,000
40,000

Revision as of 16:38, 23 July 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Cellular level Units Medium Temperature °C Other (e.g. anaerobic) Growth rate Assay used Notes Reference(s)

Protein

E. coli K-12 MC4100

1.49E+03

molecules/cell

median data from rich and minimal media

37

emPAI

PMID:18304323[1]

Protein

E. coli K-12 MC1000

17,000

molecules/cell

AB glycerol medium supplemented with 0.025% casamino acids (slowly growing cells)

30°C

quantitative western

PMID:14517265[2]

Protein

E. coli K-12 MC1000

40,000

molecules/cell

rapidly growing cells

quantitative western

PMID:14517265[2]

Notes

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

mreBCD-yhdE-rng

Figure courtesy of RegulonDB


Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.


Identification of transcription start sites and different levels of mreB and mreBCD transcripts.[3]

Translation and Regulation of Translation

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gbrowse_img.php?coord=3399089..3399129&genome=ecoli&name=MG1655&trackset=Gene+DNA_+Protein+flip&width=400&figure=Nterm&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference


Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes

microarray

GEO Profiles:b3251 (EcoliWiki Page)

NCBI GEO profiles for mreB

microarray

GenExpDB:b3251 (EcoliWiki Page)

Summary of data for mreB from multiple microarray studies


Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes

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Notes

Accessions Related to mreB Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG10608

EchoBASE (EcoliWiki Page)

EchoBASE:EB0603

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b3251

EcoGene (EcoliWiki Page)

EcoGene:EG10608



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed
  2. ↑ 2.0 2.1 Kruse, T et al. (2003) Dysfunctional MreB inhibits chromosome segregation in Escherichia coli. EMBO J. 22 5283-92 PubMed
  3. ↑ Wachi, M et al. (2006) Transcriptional analysis of the Escherichia coli mreBCD genes responsible for morphogenesis and chromosome segregation. Biosci. Biotechnol. Biochem. 70 2712-9 PubMed

Categories

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