fliG:Gene Product(s): Difference between revisions

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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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GO:0019861
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flagellum
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GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0282
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C
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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complete
|-
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GO:0016020
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membrane
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GO_REF:0000004<br />GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0397<br />SP_KW:KW-0472
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C
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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complete
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GO:0009288
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bacterial-type flagellum
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GO_REF:0000002
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IEA: Inferred from Electronic Annotation
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InterPro:IPR000090
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C
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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complete
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GO:0006935
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chemotaxis
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GO_REF:0000002<br />GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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InterPro:IPR000090<br />SP_KW:KW-0145
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P
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
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GO:0003774
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motor activity
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GO_REF:0000002
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IEA: Inferred from Electronic Annotation
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InterPro:IPR000090
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F
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
|-
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GO:0001539
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ciliary or flagellar motility
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GO_REF:0000002<br />GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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InterPro:IPR000090<br />SP_KW:KW-0283
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P
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
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GO:0005515
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protein binding
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PMID:16606699
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IPI: Inferred from Physical Interaction
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UniProtKB:P76559
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F
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
|-
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GO:0009296
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flagellum biogenesis
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P
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
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required fields missing 
|-
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GO:0005886
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plasma membrane
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GO_REF:0000004<br />GO_REF:0000004<br />GO_REF:0000023
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0997<br />SP_KW:KW-1003<br />SP_SL:SL-0037
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C
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
|-
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GO:0009425
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bacterial-type flagellum basal body
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GO_REF:0000023
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IEA: Inferred from Electronic Annotation
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SP_SL:SL-0142
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C
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
|-
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GO:0042330
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taxis
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|
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P
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
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required fields missing 
|-  
|-  
|
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protein binding
protein binding
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PMID:8631704
PMID:8604139
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IPI: Inferred from Physical Interaction
IPI: Inferred from Physical Interaction
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UniProtKB:P06974
UniProtKB:P25798




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C
C
|
|
 
Fig. 3
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complete  
complete  
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protein binding
protein binding
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PMID:8604139
PMID:8631704
|
|
IPI: Inferred from Physical Interaction
IPI: Inferred from Physical Interaction
|
|
UniProtKB:P25798
UniProtKB:P06974




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C
C
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|
Fig. 3
 
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complete  
complete  
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Revision as of 21:06, 10 June 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

FliG

Synonyms

flagellar motor switching and energizing component[1], B1939[2][1], FliG[2][1]

Product description

flagellar motor switch protein FliG[2][3];

Component of Flagellar Motor Switch Complex[3]; Flagellar Motor Complex[2][3]; Flagellum[3]

Rotor protein for flagellar motor switching and energizing; role in flagellar assembly[4]

EC number (for enzymes)


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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0060286

flagellar cell motility

PMID:8550421[5]

IMP: Inferred from Mutant Phenotype

P

Fig. 5

complete

GO:0009296

flagellum assembly

PMID:8550421[5]

IMP: Inferred from Mutant Phenotype

P

Table 3

complete

GO:0005515

protein binding

PMID:17085573[6]

IPI: Inferred from Physical Interaction

UniProtKB:P06974


C

Fig. 4

complete

GO:0005515

protein binding

PMID:8604139[7]

IPI: Inferred from Physical Interaction

UniProtKB:P25798


C

Fig. 3

complete

GO:0005515

protein binding

PMID:8631704[8]

IPI: Inferred from Physical Interaction

UniProtKB:P06974


C

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of Flagellar Motor Switch Complex

could be indirect

Protein

nadE

PMID:16606699[9]

Experiment(s):EBI-1141425

Protein

uvrY

PMID:16606699[9]

Experiment(s):EBI-1141425

Protein

rplB

PMID:16606699[9]

Experiment(s):EBI-1141425

Protein

rsuA

PMID:16606699[9]

Experiment(s):EBI-1141425

Protein

mukB

PMID:16606699[9]

Experiment(s):EBI-1141425

Protein

rplD

PMID:16606699[9]

Experiment(s):EBI-1141425

Protein

Subunits of Flagellar Motor Complex

could be indirect

Protein

Subunits of Flagellum

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Source Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence

at EcoCyc 

MSNLTGTDKS VILLMTIGED RAAEVFKHLS QREVQTLSAA MANVTQISNK QLTDVLAEFE
QEAEQFAALN INANDYLRSV LVKALGEERA ASLLEDILET RDTASGIETL NFMEPQSAAD
LIRDEHPQII ATILVHLKRA QAADILALFD ERLRHDVMLR IATFGGVQPA ALAELTEVLN
GLLDGQNLKR SKMGGVRTAA EIINLMKTQQ EEAVITAVRE FDGELAQKII DEMFLFENLV
DVDDRSIQRL LQEVDSESLL IALKGAEQPL REKFLRNMSQ RAADILRDDL ANRGPVRLSQ
VENEQKAILL IVRRLAETGE MVIGSGEDTY V
Length

331

Mol. Wt

36.776 kDa

pI

4.5 (calculated)

Extinction coefficient

2,980 (calc based on 2 Y, W, and C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=fliG taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:FLIG-FLAGELLAR-SWITCH-PROTEIN

UniProt (EcoliWiki Page)

UniProt:P0ABZ1

PFAM (EcoliWiki Page)

PFAM:PF01706

RefSeq (EcoliWiki Page)

RefSeq:NP_416449


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 Lloyd, SA et al. (1996) Torque generation in the flagellar motor of Escherichia coli: evidence of a direct role for FliG but not for FliM or FliN. J. Bacteriol. 178 223-31 PubMed
  6. ↑ Brown, PN et al. (2007) Mutational analysis of the flagellar protein FliG: sites of interaction with FliM and implications for organization of the switch complex. J. Bacteriol. 189 305-12 PubMed
  7. ↑ Marykwas, DL et al. (1996) Interacting components of the flagellar motor of Escherichia coli revealed by the two-hybrid system in yeast. J. Mol. Biol. 256 564-76 PubMed
  8. ↑ Marykwas, DL & Berg, HC (1996) A mutational analysis of the interaction between FliG and FliM, two components of the flagellar motor of Escherichia coli. J. Bacteriol. 178 1289-94 PubMed
  9. ↑ 9.0 9.1 9.2 9.3 9.4 9.5 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed

Categories

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