clpP:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''clpP''  
''clpP''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0431, b0437, JW0427, F21.5 gene, LopP, wseA''<ref name='LIB:Riley_2006'/>
''ECK0431, b0437, JW0427, F21.5 gene, LopP, wseA''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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ClpP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
ClpP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Proteolytic subunit of ClpXP and ClpAP ATP-dependent proteases; protease Ti<ref name='LIB:EcoGene'/>
Proteolytic subunit of ClpXP and ClpAP ATP-dependent proteases; protease Ti<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases<ref name='LIB:Riley_2006'/>, B0437<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LopP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, heat shock protein F21.5<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases<ref name='LIB:Riley_2006'/>, B0437<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LopP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, heat shock protein F21.5<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0005624 membrane fraction ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005739 mitochondrion ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0009408 response to heat ([http://www.geneontology.org/GO.evidence.shtml IEP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:clpPX|clpPX]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:clpPX|clpPX]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=clpP&loc=MG1655:455901..456524,W3110:455901..456524,DH10B:395232..395855,REL606:427382..428005 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=427382&end=428005&gene=clpP&aa=msysgerdnfaphmalvpmvieqtsrgersfdiysrllkervifltgqvedhmanlivaqmlfleaenpekdiylyinspggvitagmsiydtmqfikpdvsticmgqaasmgaflltagakgkrfclpnsrvmihqplggyqgqatdieihareilkvkgrmnelmalhtgqsleqierdterdrflsapeaveyglvdsilthrn Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=clpP+AND+escherichia+coli Pubmed(clpP)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=clpP Textpresso(clpP)]


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Revision as of 00:07, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

clpP

Gene Synonym(s)

ECK0431, b0437, JW0427, F21.5 gene, LopP, wseA[1]

Product Desc.

ClpP[2][3];

Component of ClpP serine protease[3]; ClpAXP[3]; ClpXP[3]; ClpAP[3]

Proteolytic subunit of ClpXP and ClpAP ATP-dependent proteases; protease Ti[4]

Product Synonyms(s)

proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases[1], B0437[2][1], LopP[2][1], heat shock protein F21.5[2][1]

Function from GO

Cellular Component

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): clpPX[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(clpP)    Textpresso(clpP)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


ClpP can simultaneously bind ClpX and ClpA to form a heteromeric complex. Binds TrxA (Kumar, 2004).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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