tolQ:Gene Product(s): Difference between revisions

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<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|tolQ}}{{Tab|Gene|tolQ}}{{Tab On|Gene Product(s)|tolQ}}{{Tab|Expression|tolQ}}{{Tab|Evolution|tolQ}}{{Tab|On One Page|tolQ}}{{TabsBottom}}
{{Tab|Quickview|tolQ}}{{Tab|Gene|tolQ}}{{Tab On|Gene Product(s)|tolQ}}{{Tab|Expression|tolQ}}{{Tab|Evolution|tolQ}}{{Tab|On One Page|tolQ}}{{TabsBottom}}
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|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Domains/Motifs/Modification Sites|Domains]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Gene Product Resources|Resources]]
|{{Sub}}[[#Gene Product Resources|Resources]]
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==Nomenclature==
==Nomenclature==
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|-
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!{{table heading style}} |Standard name
!align=left {{table heading style}} |Standard name
|
||
TolQ product
TolQ  
|-
|-
!{{table heading style}} |Synonyms
!align=left {{table heading style}} |Synonyms
|
||
membrane spanning protein in TolA-TolQ-TolR complex<ref name='LIB:Riley_2006'/>, B0737<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fii<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''membrane spanning protein in TolA-TolQ-TolR complex<ref name='LIB:Riley_2006'/>, B0737<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fii<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TolQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0726, fii, JW0727, tolP, b0737''
|-
|-
!{{table heading style}} |Product description
!align=left {{table heading style}} |Product description
|
||
TolQ<ref name='LIB:EcoCyc10.6'/>; TolQ<ref name='LIB:EcoCyc11.1'/>; Component of [[:Category:Complex:Tol-Pal Cell Envelope Complex|Tol-Pal Cell Envelope Complex]]<ref name='LIB:EcoCyc10.6'/>; Tol-Pal Cell Envelope Complex<ref name='LIB:EcoCyc10.6'/>; Component of [[:Category:Complex:The Tol-Pal Cell Envelope Complex|The Tol-Pal Cell Envelope Complex]]<ref name='LIB:EcoCyc11.1'/>; The Tol-Pal Cell Envelope Complex<ref name='LIB:EcoCyc11.1'/>; Component of [[:Category:Complex:The Colicin A Import System|The Colicin A Import System]]<ref name='LIB:EcoCyc11.1'/>; The Colicin A Import System<ref name='LIB:EcoCyc11.1'/>; Component of [[:Category:Complex:Colicin S4 Transport System|Colicin S4 Transport System]]<ref name='LIB:EcoCyc11.1'/>; Colicin S4 Transport System<ref name='LIB:EcoCyc11.1'/>
TolQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
 
Component of [[:Category:Complex:Tol-Pal Cell Envelope Complex|Tol-Pal Cell Envelope Complex]]<ref name='LIB:EcoCyc10.6'/>; [[:Category:Complex:The Tol-Pal Cell Envelope Complex|The Tol-Pal Cell Envelope Complex]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:The Colicin A Import System|The Colicin A Import System]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:Colicin S4 Transport System|Colicin S4 Transport System]]<ref name='LIB:EcoCyc11.1'/>


Tolerance to group A colicins and ssDNA filamentous phage; cell envelope integrity; inner membrane protein<ref name='LIB:EcoGene'/>
|-
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!{{table heading style}} |EC number (for enzymes)
!align=left {{table heading style}} |EC number (for enzymes)
|
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*
 
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===Notes===
===Notes===
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==Function==
==Function==
{{BacktoTop}}
<protect>
<protect>
===Gene Ontology===
<big>'''Gene Ontology'''</big><br /><!--box uid=421aa90e079fa326b6494f812ad13e79.21237.N46aa4089ce563-->
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-class='sortbottom'
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|
 
|
GO:0005515
|
protein binding
|
PMID:10419942
|
IDA: Inferred from Direct Assay
|
 
|
F
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0005515
|
protein binding
|
PMID:7744737
|
IDA: Inferred from Direct Assay
|
 
|
F
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0005886
|
plasma membrane
|
PMID:8331075
|
IDA: Inferred from Direct Assay
|
 
|
C
|
 
|
complete
|-
|
 
|
GO:0005886
|
plasma membrane
|
GOA:spkw<br />SP_KW:GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0997
|
C
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0016021
|
integral to membrane
|
PMID:8331075
|
IDA: Inferred from Direct Assay
|
 
|
C
|
 
|
complete
|-
|
 
|
GO:0005886
|
plasma membrane
|
GOA:spkw<br />SP_KW:GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-1003
|
C
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0017038
|
protein import
|
PMID:2651401
|
IMP: Inferred from Mutant Phenotype
|
 
|
P
|
 
|
complete
|-
|
 
|
GO:0006810
|
transport
|
GOA:interpro<br />GO_REF:0000002
|
IEA: Inferred from Electronic Annotation
|
InterPro:IPR002898
|
P
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0043213
|
bacteriocin transport
|
PMID:2651401
|
IMP: Inferred from Mutant Phenotype
|
 
|
P
|
 
|
complete
|-
|
 
|
GO:0006810
|
transport
|
GOA:spkw<br />SP_KW:GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0813
|
P
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0005515
|
protein binding
|
PMID:7744737
|
IDA: Inferred from Direct Assay
|
 
|
F
|
with TolA
|
complete
|-
|
 
|
GO:0008565
|
protein transporter activity
|
GOA:interpro<br />GO_REF:0000002
|
IEA: Inferred from Electronic Annotation
|
InterPro:IPR002898
|
F
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0005515
|
protein binding
|
PMID:10419942
|
IDA: Inferred from Direct Assay
|
 
|
F
|
with TolR
|
complete
|-
|
 
|
GO:0015031
|
protein transport
|
GOA:spkw<br />SP_KW:GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0653
|
P
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0016021
|
integral to membrane
|
GOA:spkw<br />SP_KW:GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0812
|
C
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0016021
|
integral to membrane
|
GO_REF:0000023
|
IEA: Inferred from Electronic Annotation
|
SP_SL:SL-9909
|
C
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
|-
|
 
|
GO:0043213
|
bacteriocin transport
|
GOA:spkw<br />SP_KW:GO_REF:0000004
|
IEA: Inferred from Electronic Annotation
|
SP_KW:KW-0080
|
P
|
Seeded from [[EcoCyc]] (v14.0)
|
complete
 
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===Interactions===
<span id="Interactions"></span><big>'''Interactions'''</big>
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!Partner Type!!Partner!!Notes
!|Partner Type!!Partner!!Notes!!References!!Evidence
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Protein
Protein
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Subunits of [[:Category:Complex:Tol-Pal Cell Envelope Complex|Tol-Pal Cell Envelope Complex]]  
Subunits of [[:Category:Complex:Tol-Pal Cell Envelope Complex|Tol-Pal Cell Envelope Complex]]  
|
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could be indirect   
could be indirect  
|-
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|
   
|-  
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Protein
Protein
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Subunits of [[:Category:Complex:The Tol-Pal Cell Envelope Complex|The Tol-Pal Cell Envelope Complex]]  
Subunits of [[:Category:Complex:The Tol-Pal Cell Envelope Complex|The Tol-Pal Cell Envelope Complex]]  
|
|
could be indirect   
could be indirect  
|-
|
 
|
   
|-  
|
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Protein
Protein
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Subunits of [[:Category:Complex:The Colicin A Import System|The Colicin A Import System]]  
Subunits of [[:Category:Complex:The Colicin A Import System|The Colicin A Import System]]  
|
|
could be indirect   
could be indirect  
|-
|
 
|
   
|-  
|
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Protein
Protein
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Subunits of [[:Category:Complex:Colicin S4 Transport System|Colicin S4 Transport System]]  
Subunits of [[:Category:Complex:Colicin S4 Transport System|Colicin S4 Transport System]]  
|
|
could be indirect   
could be indirect  
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<!--Function_notes--></protect>
<!--Function_notes--></protect>
===Notes===
===Notes===


==Localization==
==Localization==
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!|Compartment!!Description!!Evidence!!Reference/Source!!Notes
|-
|
plasma membrane
|
C-terminus localized in the cytoplasm with 3 predicted transmembrane domains
|
Daley et al. (2005) <ref name=PMID:15919996/>
|
|
|-
|
Inner Membrane
|
|
PMID:8300535, PMID:8331075
|
[http://www.york.ac.uk/res/thomas/Echolocation.cfm?EB_SubLocID=EB1003 EchoLocation:tolQ]
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<protect><!--Localization_notes--></protect>
<protect><!--Localization_notes--></protect>
===Notes===
===Notes===


==Structure and Physical Properties==
==Structure and Physical Properties==
{{BacktoTop}}
<protect>
<protect>
===Physical Properties===
<span id="Sequence"></span><big>'''Physical Properties'''</big>
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|-
!align=left {{table heading style}} |Name
||
 
|-
|-
!{{table heading style}} |Sequence
!align=left {{table heading style}} |Sequence
|
||
[http://biocyc.org/ECOLI/sequence-aa?object=EG11010-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=EG11010-MONOMER at EcoCyc]  
<pre>MTDMNILDLF LKASLLVKLI MLILIGFSIA SWAIIIQRTR ILNAAAREAE AFEDKFWSGI
<pre>MTDMNILDLF LKASLLVKLI MLILIGFSIA SWAIIIQRTR ILNAAAREAE AFEDKFWSGI
Line 122: Line 544:
GLFAAIPAVM AYNRLNQRVN KLELNYDNFM EEFTAILHRQ AFTVSESNKG</pre>  
GLFAAIPAVM AYNRLNQRVN KLELNYDNFM EEFTAILHRQ AFTVSESNKG</pre>  
|-
|-
!{{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Length
||
230
|-
!align=left {{table heading style}} |Mol. Wt
||
25.598 kDa
|-
!align=left {{table heading style}} |pI
||
7.1 (calculated)
|-
!align=left {{table heading style}} |Extinction coefficient
||
23,950 (calc based on 5 Y, 3 W, and 0 C residues)
 
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<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span>
<table>
<tr align="left" valign="top">
<td>
 
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!|Type!!Residues!!Description!!Notes!!References
|-
|
Domain
|
73..211
|
|
25.6 kDa (calc) <ref name='LIB:EcoCyc10.6'/>
[http://pfam.janelia.org/family/PF01618 PF01618  MotA/TolQ/ExbB proton channel family]
|-
|
!{{table heading style}} |pI
 
|
|
PMID:19920124
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<td>
<!-- motifs column 2-->
   
   
<motif_map/>
{{TMHMM Picture|tolQ}}
</td>
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<table><tr valign='top'><td>
<span id='Structure'></span><big>'''Structure'''</big><br />
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!{{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |Structures
|
||
23950 (calc based on 5 Y, 3 W, and 0 C residues)
<beststructure>
gene=tolQ
taxon=562,83333
</beststructure>
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!align=left {{table heading style}} |Models
||
View models at:
* [http://www.proteinmodelportal.org/query/uniprot/P0ABU9 Protein Model Portal]
* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P0ABU9 PSI-PRED (P0ABU9)]
* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P0ABU9 Genomes TO Protein (P0ABU9)] (GTOP)
 
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===Domains/Motifs/Modification Sites===
</td><td></protect>
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==== Structure figures ====
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!Type!!Residues!!Description!!Notes
 
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===Structure===
 
 
 
 
 
 
 
 


{{Product_structure_help}}
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</td><tr><table><!--Structure_notes--></protect>
===Notes===
===Notes===




==Gene Product Resources==
==Gene Product Resources==
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!|Resource type!!Source!!Notes/Reference
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===Notes===
===Notes===


==Accessions in Other Databases==
==Accessions in Other Databases==
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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|-
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[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
|
[http://www.ncbi.nlm.nih.gov/protein/16128712 GI:16128712]
|
Escherichia coli str. K-12 substr. MG1655
|-
|
[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)|EcoliWiki Page]])
|
[http://www.ncbi.nlm.nih.gov/protein/NP_415265.1 GeneID:948900]
|
Escherichia coli str. K-12 substr. MG1655
|-
|
[[ASAP]]
|
ASAP:ABE-0002511
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[http://www.pir.uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
|
[http://www.uniprot.org/uniprot/P0ABU9 UniProtKB/Swiss-Prot:P0ABU9]
|
Escherichia coli str. K-12 substr. MG1655
|-
|
[[EcoCyc]]
|
EcoCyc:EG11010
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-  
|
|
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
[[EcoGene]]
|
|
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11010-MONOMER EcoCyc:EG11010-MONOMER] 
EcoGene:EG11010
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|-  
|
|
[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])  
[http://www.ncbi.nlm.nih.gov/gene NCBI (Gene)] ([[NCBI (Gene)|EcoliWiki Page]])
|
|
[http://www.expasy.ch/cgi-bin/sprot-search-ac?P0ABU9 UniProt:P0ABU9]
[http://www.ncbi.nlm.nih.gov/gene?term=948900 GeneID:948900]
|
|
Escherichia coli str. K-12 substr. MG1655
|-
|-  
|
|
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
[[RegulonDB]]
|
|
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01618 PFAM:PF01618] 
RegulonDB:ECK120000999
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|-  
|
|
[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])
[[EchoBASE]]
|
|
[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_415265 RefSeq:NP_415265] 
EchoBASE:EB1003
|
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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===Notes===
===Notes===
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==Links==
==Links==
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<noinclude>
<noinclude>
==References==
==References==
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{{RefHelp}}
{{RefHelp}}
<references/>
<references />
__NOTOC__
__NOTOC__
[[Category:Complex:Tol-Pal Cell Envelope Complex]][[Category:Complex:The Tol-Pal Cell Envelope Complex]][[Category:Complex:The Colicin A Import System]][[Category:Complex:Colicin S4 Transport System]]</noinclude>
===Categories===
{{BacktoTop}}
[[Category:Proteins]]
[[Category:Complex:Tol-Pal Cell Envelope Complex]][[Category:Complex:The Tol-Pal Cell Envelope Complex]][[Category:Complex:The Colicin A Import System]][[Category:Complex:Colicin S4 Transport System]]
[[Category:Pfam:PF01618_!_MotA/TolQ/ExbB proton channel family]]

Latest revision as of 20:29, 17 February 2015

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

TolQ

Synonyms

membrane spanning protein in TolA-TolQ-TolR complex[1], B0737[2][1], Fii[2][1], TolP[2][1], TolQ[2][1] , ECK0726, fii, JW0727, tolP, b0737

Product description

TolQ[2][3];

Component of Tol-Pal Cell Envelope Complex[2]; The Tol-Pal Cell Envelope Complex[3]; The Colicin A Import System[3]; Colicin S4 Transport System[3]

Tolerance to group A colicins and ssDNA filamentous phage; cell envelope integrity; inner membrane protein[4]

EC number (for enzymes)


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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005515

protein binding

PMID:10419942[5]

IDA: Inferred from Direct Assay

F

Seeded from EcoCyc (v14.0)

complete

GO:0005515

protein binding

PMID:7744737[6]

IDA: Inferred from Direct Assay

F

Seeded from EcoCyc (v14.0)

complete

GO:0005886

plasma membrane

PMID:8331075[7]

IDA: Inferred from Direct Assay

C

complete

GO:0005886

plasma membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0997

C

Seeded from EcoCyc (v14.0)

complete

GO:0016021

integral to membrane

PMID:8331075[7]

IDA: Inferred from Direct Assay

C

complete

GO:0005886

plasma membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-1003

C

Seeded from EcoCyc (v14.0)

complete

GO:0017038

protein import

PMID:2651401[8]

IMP: Inferred from Mutant Phenotype

P

complete

GO:0006810

transport

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002898

P

Seeded from EcoCyc (v14.0)

complete

GO:0043213

bacteriocin transport

PMID:2651401[8]

IMP: Inferred from Mutant Phenotype

P

complete

GO:0006810

transport

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0813

P

Seeded from EcoCyc (v14.0)

complete

GO:0005515

protein binding

PMID:7744737[6]

IDA: Inferred from Direct Assay

F

with TolA

complete

GO:0008565

protein transporter activity

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002898

F

Seeded from EcoCyc (v14.0)

complete

GO:0005515

protein binding

PMID:10419942[5]

IDA: Inferred from Direct Assay

F

with TolR

complete

GO:0015031

protein transport

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0653

P

Seeded from EcoCyc (v14.0)

complete

GO:0016021

integral to membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0812

C

Seeded from EcoCyc (v14.0)

complete

GO:0016021

integral to membrane

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-9909

C

Seeded from EcoCyc (v14.0)

complete

GO:0043213

bacteriocin transport

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0080

P

Seeded from EcoCyc (v14.0)

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of Tol-Pal Cell Envelope Complex

could be indirect

Protein

Subunits of The Tol-Pal Cell Envelope Complex

could be indirect

Protein

Subunits of The Colicin A Import System

could be indirect

Protein

Subunits of Colicin S4 Transport System

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

plasma membrane

C-terminus localized in the cytoplasm with 3 predicted transmembrane domains

Daley et al. (2005) [9]

Inner Membrane

PMID:8300535[10], PMID:8331075[7]

EchoLocation:tolQ


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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MTDMNILDLF LKASLLVKLI MLILIGFSIA SWAIIIQRTR ILNAAAREAE AFEDKFWSGI
ELSRLYQESQ GKRDNLTGSE QIFYSGFKEF VRLHRANSHA PEAVVEGASR AMRISMNREL
ENLETHIPFL GTVGSISPYI GLFGTVWGIM HAFIALGAVK QATLQMVAPG IAEALIATAI
GLFAAIPAVM AYNRLNQRVN KLELNYDNFM EEFTAILHRQ AFTVSESNKG
Length

230

Mol. Wt

25.598 kDa

pI

7.1 (calculated)

Extinction coefficient

23,950 (calc based on 5 Y, 3 W, and 0 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

73..211

PF01618 MotA/TolQ/ExbB proton channel family

PMID:19920124[11]

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<motif_map/>

tmhmm.php?gene=tolQ&show=pic&.jpg
Click the image to view raw output from TMHMM.

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=tolQ taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16128712

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948900

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002511

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0ABU9

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11010

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11010

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948900

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000999

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1003

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 Journet, L et al. (1999) Role of TolR N-terminal, central, and C-terminal domains in dimerization and interaction with TolA and tolQ. J. Bacteriol. 181 4476-84 PubMed
  6. ↑ 6.0 6.1 Derouiche, R et al. (1995) Protein complex within Escherichia coli inner membrane. TolA N-terminal domain interacts with TolQ and TolR proteins. J. Biol. Chem. 270 11078-84 PubMed
  7. ↑ 7.0 7.1 7.2 Kampfenkel, K & Braun, V (1993) Membrane topologies of the TolQ and TolR proteins of Escherichia coli: inactivation of TolQ by a missense mutation in the proposed first transmembrane segment. J. Bacteriol. 175 4485-91 PubMed
  8. ↑ 8.0 8.1 Bourdineaud, JP et al. (1989) Localization and assembly into the Escherichia coli envelope of a protein required for entry of colicin A. J. Bacteriol. 171 2458-65 PubMed
  9. ↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed
  10. ↑ Vianney, A et al. (1994) Membrane topology and mutational analysis of the TolQ protein of Escherichia coli required for the uptake of macromolecules and cell envelope integrity. J. Bacteriol. 176 822-9 PubMed
  11. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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