tatC:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

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Standard name

TatC

Synonyms

TatABCE protein translocation system subunit[1], YigV[2][1], YigU[2][1], MttB[2][1], TatC[2][1], B3839[2][1] , ECK3832, JW3815, mttB, yigU, yigV, b3839

Product description

TatC[2][3];

Component of TatABCE protein export complex[2][3]

Protein translocase, Sec-independent; mediates export of folded and ligand-bound proteins[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0009977

proton motive force dependent protein transmembrane transporter activity

PMID:11350936[5]

IMP: Inferred from Mutant Phenotype

F

Seeded from EcoCyc (v14.0)

complete

GO:0033281

TAT protein transport complex

PMID:11279240[6]

IDA: Inferred from Direct Assay

C

Seeded from EcoCyc (v14.0)

complete

GO:0065002

intracellular protein transmembrane transport

PMID:11279240[6]

IDA: Inferred from Direct Assay

P

Seeded from EcoCyc (v14.0)

complete

GO:0065002

intracellular protein transmembrane transport

PMID:9546395[7]

IMP: Inferred from Mutant Phenotype

P

Seeded from EcoCyc (v14.0)

complete

GO:0016020

membrane

PMID:10747959[8]

IDA: Inferred from Direct Assay

C

complete

GO:0008320

protein transmembrane transporter activity

PMID:9660752[9]

IMP: Inferred from Mutant Phenotype

F

replaced original annotation toGO:0008565 because that term was made obsolete

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of TatABCE protein export complex

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

plasma membrane

C-terminus localized in the cytoplasm with 6 predicted transmembrane domains

Daley et al. (2005) [10]

membrane


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MSVEDTQPLI THLIELRKRL LNCIIAVIVI FLCLVYFAND IYHLVSAPLI KQLPQGSTMI
ATDVASPFFT PIKLTFMVSL ILSAPVILYQ VWAFIAPALY KHERRLVVPL LVSSSLLFYI
GMAFAYFVVF PLAFGFLANT APEGVQVSTD IASYLSFVMA LFMAFGVSFE VPVAIVLLCW
MGITSPEDLR KKRPYVLVGA FVVGMLLTPP DVFSQTLLAI PMYCLFEIGV FFSRFYVGKG
RNREEENDAE AESEKTEE
Length

258

Mol. Wt

28.876 kDa

pI

5.2 (calculated)

Extinction coefficient

25,900 - 26,400 (calc based on 10 Y, 2 W, and 4 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Initiator Methionine

1

Removed

UniProt:P69423

Domain

10..221

PF00902 Sec-independent protein translocase protein (TatC)

PMID:19920124[11]

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tmhmm.php?gene=tatC&show=pic&.jpg
Click the image to view raw output from TMHMM.

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=tatC taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16131687

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:948328

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012547

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P69423

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:EG11479

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11479

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:948328

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001438

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1445

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Yahr, TL & Wickner, WT (2001) Functional reconstitution of bacterial Tat translocation in vitro. EMBO J. 20 2472-9 PubMed
  6. ↑ 6.0 6.1 Bolhuis, A et al. (2001) TatB and TatC form a functional and structural unit of the twin-arginine translocase from Escherichia coli. J. Biol. Chem. 276 20213-9 PubMed
  7. ↑ Weiner, JH et al. (1998) A novel and ubiquitous system for membrane targeting and secretion of cofactor-containing proteins. Cell 93 93-101 PubMed
  8. ↑ Wexler, M et al. (2000) TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export. J. Biol. Chem. 275 16717-22 PubMed
  9. ↑ Bogsch, EG et al. (1998) An essential component of a novel bacterial protein export system with homologues in plastids and mitochondria. J. Biol. Chem. 273 18003-6 PubMed
  10. ↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed
  11. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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