ptsG:Gene
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Location(s) and DNA Sequence | Sequence Features | Alleles and Phenotypes | Genetic Interactions | Genetic Resources | Accessions | Links | References | Suggestions |
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Nomenclature
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
| Standard name |
ptsG |
|---|---|
| Mnemonic |
Phosphotransferase system |
| Synonyms |
ECK1087, b1101, JW1087, CR, car, cat, gptA, umg, catB2, tgl, umgC[1], glcA, umgC |
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Notes
Location(s) and DNA Sequence
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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
| Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
|---|---|---|---|---|
|
MG1655 |
24.94 minutes |
MG1655: 1157092..1158525 |
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NC_012967: 1172438..1173871 |
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NC_012759: 1061017..1062450 |
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W3110 |
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W3110: 1159446..1160879 |
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DH10B: 1212537..1213970 |
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Notes
Sequence Features
See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
| Feature Type | Strain | Genomic Location | Evidence | Reference | Notes |
|---|---|---|---|---|---|
|
Coding Start (SO:0000323) |
1157092 |
Edman degradation |
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Notes
Alleles and Phenotypes
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
| Allele | Nt change(s) | AA change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
|---|---|---|---|---|---|---|---|
|
ptsG(del) (Keio:JW1087) |
deletion |
deletion |
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ptsG22 |
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ptsG21 |
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car-94 |
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car-92 |
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ptsG23 |
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ptsG0 |
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car-93::Mu |
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ptsG763(del)::kan |
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ptsG+ |
Carbon utilization |
Utilize Glucoseamine as C source, table 2. |
Experimental strain: JM1110 |
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ptsG+ |
Carbon Utilization |
Utilization of Mannose as a Carbon source, table 2. |
JM1110 |
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ptsG - |
Resistant to |
Mutant is resistant to sorbose |
Experimental strain: HK737 |
table 1 | |||
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Notes
Genetic Interactions
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| Interactor | Interaction | Allele | Score(s) | Reference(s) | Accessions | Notes |
|---|---|---|---|---|---|---|
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Notes
Genetic Resources
See Help:Gene_resources for help entering information into the Genetic Resources table.
| Resource | Resource Type | Source | Notes/Reference |
|---|---|---|---|
|
JW1087 |
Plasmid clone |
Status:Clone OK Primer 1:GCCTTTAAGAATGCATTTGCTAA Primer 2:CCGTGGTTACGGATGTACTCATC | |
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Kohara Phage |
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Kohara Phage |
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Linked marker |
est. P1 cotransduction: 94% [9] | ||
|
Linked marker |
est. P1 cotransduction: 7% [9] | ||
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
| Name | URL | Comments |
|---|---|---|
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ Erni, B & Zanolari, B (1986) Glucose-permease of the bacterial phosphotransferase system. Gene cloning, overproduction, and amino acid sequence of enzyme IIGlc. J. Biol. Chem. 261 16398-403 PubMed
- ↑ 3.0 3.1 Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed
- ↑ 4.0 4.1 4.2 CGSC: The Coli Genetics Stock Center
- ↑ 5.0 5.1 Jones-Mortimer, MC & Kornberg, HL (1980) Amino-sugar transport systems of Escherichia coli K12. J. Gen. Microbiol. 117 369-76 PubMed
- ↑ Slater, AC et al. (1981) L-Sorbose phosphorylation in Escherichia coli K-12. Biochim. Biophys. Acta 646 365-7 PubMed
- ↑ Kitagawa, M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12 291-9 PubMed
- ↑ 8.0 8.1 Kohara, Y et al. (1987) The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library. Cell 50 495-508 PubMed
- ↑ 9.0 9.1 The Tn10 insertion sites determined by Nichols et al. 1998 (PMID:9829956) were reannotated by alignment with E. coli K-12 genome sequence (GenBank accession NC_000913). P1 contransduction frequencies were calculated using the formula of Wu (PMID:5338813).
