hyuA:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

HyuA

Synonyms

D-stereospecific phenylhydantoinase[1], B2873[2][1], YgeZ[2][1], HyuA[2][1] , ECK2869, JW2841, ygeZ, b2873

Product description

phenylhydantoinase[2][3];

Component of phenylhydantoinase[3]

D-stereospecific phenylhydantoinase; physiological function unknown[4]

EC number (for enzymes)

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Notes

HyuA will also hydrolyze hydantoin, but the activity on that substrate is lower than hydrolysis of Phenylhydantoin.jpg, which is a hydantoin derivative with an aromatic side chain at the 5′ position.[5]

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005737

cytoplasm

PMID:16397293[6]

ISS: Inferred from Sequence or Structural Similarity

C

Seeded from Riley et al 2006 [1].


Missing: with/from

GO:0016812

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides

PMID:11092864[5]

IDA: Inferred from Direct Assay

F

complete

GO:0016812

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_01644

F

Seeded from EcoCyc (v14.0)

complete

GO:0046872

metal ion binding

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded from EcoCyc (v14.0)

complete

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of phenylhydantoinase

Protein

ydcW

PMID:16606699[7]

Experiment(s):EBI-1144172

Protein

groL

PMID:16606699[7]

Experiment(s):EBI-1144172

Protein

self

homotetramer

PMID:11092864[5]

gel-filtration

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MEFAMRVLIK NGTVVNADGQ AKQDLLIESG IVRQLGNNIS PQLPYEEIDA TGCYVFPGGV
DVHTHFNIDV GIARSCDDFF TGTRAAACGG TTTIIDHMGF GPNGCRLRHQ LEVYRGYAAH
KAVIDYSFHG VIQHINHAIL DEIPMIVEEG LSSFKLYLTY QYKLNDDEVL QALRRLHESG
ALTTVHPEND AAIASKRAEF IAAGLTAPRY HALSRPLECE AEAIARMINL AQIAGNAPLY
IVHLSNGLGL DYLRLARANH QPVWVETCPQ YLLLDERSYD TEDGMKFILS PPLRNVREQD
KLWCGISDGA IDVVATDHCT FSMAQRLQIS KGDFSRCPNG LPGVENRMQL LFSSGVMTGR
ITPERFVELT SAMPARLFGL WPQKGLLAPG SDGDVVIIDP RQSQQIQHRH LHDNADYSPW
EGFTCQGAIV RTLSRGETIF CDGTFTGKAG RGRFLRRKPF VPPVL
Length

465

Mol. Wt

51.504 kDa

pI

6.6 (calculated)

Extinction coefficient

42,860 - 44,235 (calc based on 14 Y, 4 W, and 11 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

50..279

PF01979 Amidohydrolase family

PMID:19920124[8]

Domain

289..395

PF01979 Amidohydrolase family

PMID:19920124[8]

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=hyuA taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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</protect>

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

Purification protocol

PMID:11092864[5]

Antibody

PMID:11092864[5]

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111504

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:947359

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009436

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:Q46806

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7492

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13056

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:947359

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004055

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2868

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. 5.0 5.1 5.2 5.3 5.4 Kim, GJ et al. (2000) Functional expression and characterization of the two cyclic amidohydrolase enzymes, allantoinase and a novel phenylhydantoinase, from Escherichia coli. J. Bacteriol. 182 7021-8 PubMed
  6. Riley, M et al. (2006) Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. 34 1-9 PubMed
  7. 7.0 7.1 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  8. 8.0 8.1 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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