ftsB:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

FtsB

Synonyms

cell division protein[1], B2748[2][1], FtsB[2][1], YgbQ[2][1] , ECK2743, JW2718, ygbQ, b2748

Product description

essential cell division protein FtsB[2][3]

Membrane protein required for cell division; septum localization dependent on Ftsl and FtsQ[4]

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005886

plasma membrane

GOA:hamap
GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00599

C

Seeded from EcoCyc (v14.0)

complete

GO:0005886

plasma membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0997

C

Seeded from EcoCyc (v14.0)

complete

GO:0005886

plasma membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-1003

C

Seeded from EcoCyc (v14.0)

complete

GO:0051301

cell division

PMID:11972052[5]

IMP: Inferred from Mutant Phenotype

P

complete

GO:0007049

cell cycle

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007060

P

Seeded from EcoCyc (v14.0)

complete

GO:0030428

cell septum

PMID:11972052[5]

IDA: Inferred from Direct Assay

C

Changed fromGO:0000935 barrier septum.127.0.0.1 14:55, 17 February 2015 (CST)

complete

GO:0007049

cell cycle

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0131

P

Seeded from EcoCyc (v14.0)

complete

Deprecated

GO:0051301

cell division

PMID:4583216[6]

IMP: Inferred from Mutant Phenotype

P

The mutant (MFT84) described in this paper was later found to be an allele of nrdB.[7] [8]

complete

GO:0016020

membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0472

C

Seeded from EcoCyc (v14.0)

complete

GO:0016021

integral to membrane

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0812

C

Seeded from EcoCyc (v14.0)

complete

GO:0016021

integral to membrane

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-9906

C

Seeded from EcoCyc (v14.0)

complete

GO:0051301

cell division

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0132

P

Seeded from EcoCyc (v14.0)

complete

Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

FtsL

n-terminal of FtsB is required for interaction with FtsL; in the absence of FtsQ, FtsL and FtsB can still interact

PMID:19233928[9]

Protein

FtsQ

C-terminal of FtsB is required for interaction with FtsQ

PMID:19233928[9]


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

plasma membrane

From EcoCyc[3]

Septum

PMID:11972052[5]

localization depends on FtsL and FtsQ

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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MGKLTLLLLA ILVWLQYSLW FGKNGIHDYT RVNDDVAAQQ ATNAKLKARN DQLFAEIDDL
NGGQEALEER ARNELSMTRP GETFYRLVPD ASKRAQSAGQ NNR
Length

103

Mol. Wt

11.622 kDa

pI

7.3 (calculated)

Extinction coefficient

15,470 (calc based on 3 Y, 2 W, and 0 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

11..90

PF04977 Septum formation initiator

PMID:19920124[10]

<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=ftsB taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:16130655

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:946033

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009019

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P0A6S5

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7424

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13111

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:946033

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003989

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2914

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. 5.0 5.1 5.2 Buddelmeijer, N et al. (2002) YgbQ, a cell division protein in Escherichia coli and Vibrio cholerae, localizes in codependent fashion with FtsL to the division site. Proc. Natl. Acad. Sci. U.S.A. 99 6316-21 PubMed
  6. Ricard, M & Hirota, Y (1973) Process of cellular division in Escherichia coli: physiological study on thermosensitive mutants defective in cell division. J. Bacteriol. 116 314-22 PubMed
  7. Kren, B & Fuchs, JA (1987) Characterization of the ftsB gene as an allele of the nrdB gene in Escherichia coli. J. Bacteriol. 169 14-8 PubMed
  8. Taschner, PE et al. (1987) Genetic and morphological characterization of ftsB and nrdB mutants of Escherichia coli. J. Bacteriol. 169 19-25 PubMed
  9. 9.0 9.1 Gonzalez, MD & Beckwith, J (2009) Divisome under construction: distinct domains of the small membrane protein FtsB are necessary for interaction with multiple cell division proteins. J. Bacteriol. 191 2815-25 PubMed
  10. Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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