feaB:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

FeaB

Synonyms

phenylacetaldehyde dehydrogenase[1], B1385[2][1], YdbG[2][1], PadA[2][1], FeaB[2][1] , ECK1382, JW1380, padA, ydbG, b1385

Product description

FeaB[2][3];

Component of phenylacetaldehyde dehydrogenase[2][3]

Catabolism of phenylethylamine[4]

EC number (for enzymes)
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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005737

cytoplasm

C

Seeded from Riley et al 2006 [1].

Missing: evidence, reference

GO:0008957

phenylacetaldehyde dehydrogenase activity

GOA:spec
GO_REF:0000003

IEA: Inferred from Electronic Annotation

EC:1.2.1.39

F

Seeded from EcoCyc (v14.0)

complete

GO:0008957

phenylacetaldehyde dehydrogenase activity

PMID:9109378[5]

IDA: Inferred from Direct Assay

F

Seeded from EcoCyc (v14.0)

complete

GO:0009435

NAD biosynthetic process

PMID:9109378[5]

IDA: Inferred from Direct Assay

P

Seeded from EcoCyc (v14.0)

complete

GO:0016491

oxidoreductase activity

PMID:16731973[6]

IDA: Inferred from Direct Assay

F

complete

GO:0046196

4-nitrophenol catabolic process

PMID:9109378[5]

IDA: Inferred from Direct Assay

P

Seeded from EcoCyc (v14.0)

complete

GO:0008957

phenylacetaldehyde dehydrogenase activity

PMID:16731973[6]

IDA: Inferred from Direct Assay

F

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR015590

P

Seeded from EcoCyc (v14.0)

complete

GO:0009435

NAD biosynthetic process

PMID:16731973[6]

IDA: Inferred from Direct Assay

P

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016160

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016161

P

Seeded from EcoCyc (v14.0)

complete

GO:0055114

oxidation reduction

GOA:interpro
GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016162

P

Seeded from EcoCyc (v14.0)

complete

GO:0009435

NAD biosynthetic process

PMID:9043126[7]

IDA: Inferred from Direct Assay

P

complete

GO:0046196

4-nitrophenol catabolic process

PMID:9109378[5]

IDA: Inferred from Direct Assay

P

from E.coli W

complete

GO:0055114

oxidation reduction

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0560

P

Seeded from EcoCyc (v14.0)

complete

GO:0047106

4-hydroxyphenylacetaldehyde dehydrogenase activity

PMID:9043126[7]

IDA: Inferred from Direct Assay

F

complete

GO:0009435

NAD biosynthetic process

PMID:9109378[5]

IDA: Inferred from Direct Assay

P

from E.coli W

complete

GO:0008957

phenylacetaldehyde dehydrogenase activity

PMID:9109378[5]

IDA: Inferred from Direct Assay

F

from E.coli W

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of phenylacetaldehyde dehydrogenase

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc 

MMTEPHVAVL SQVQQFLDRQ HGLYIDGRPG PAQSEKRLAI FDPATGQEIA STADANEADV
DNAVMSAWRA FVSRRWAGRL PAERERILLR FADLVEQHSE ELAQLETLEQ GKSIAISRAF
EVGCTLNWMR YTAGLTTKIA GKTLDLSIPL PQGARYQAWT RKEPVGVVAG IVPWNFPLMI
GMWKVMPALA AGCSIVIKPS ETTPLTMLRV AELASEAGIP DGVFNVVTGS GAVCGAALTS
HPHVAKISFT GSTATGKGIA RTAADHLTRV TLELGGKNPA IVLKDADPQW VIEGLMTGSF
LNQGQVCAAS SRIYIEAPLF DTLVSGFEQA VKSLQVGPGM SPVAQINPLV SRAHCDKVCS
FLDDAQAQQA ELIRGSNGPA GEGYYVAPTL VVNPDAKLRL TREEVFGPVV NLVRVADGEE
ALQLANDTEY GLTASVWTQN LSQALEYSDR LQAGTVWVNS HTLIDANLPF GGMKQSGTGR
DFGPDWLDGW CETKSVCVRY
Length

500

Mol. Wt

53.829 kDa

pI

5.3 (calculated)

Extinction coefficient

73,910 - 74,910 (calc based on 9 Y, 11 W, and 8 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

Domain

30..495

PF00171 Aldehyde dehydrogenase family

PMID:19920124[8]

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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=feaB taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111264

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945933

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004637

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P80668

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G7961

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13179

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945933

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004448

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2971

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 5.3 5.4 5.5 Ferrandez, A et al. (1997) Molecular characterization of PadA, a phenylacetaldehyde dehydrogenase from Escherichia coli. FEBS Lett. 406 23-7 PubMed
  6. ↑ 6.0 6.1 6.2 Rodríguez-Zavala, JS et al. (2006) Characterization of E. coli tetrameric aldehyde dehydrogenases with atypical properties compared to other aldehyde dehydrogenases. Protein Sci. 15 1387-96 PubMed
  7. ↑ 7.0 7.1 Hanlon, SP et al. (1997) 2-phenylethylamine catabolism by Escherichia coli K-12: gene organization and expression. Microbiology (Reading, Engl.) 143 ( Pt 2) 513-8 PubMed
  8. ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed

Categories

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