entS:Gene

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

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Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

entS

Mnemonic

Enterochelin

Synonyms

ybdA, ECK0584, b0591, JW0583[1][2], JW0583

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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

13.4 minutes 

MG1655: 621523..622773
<gbrowseImage> name=NC_000913:621523..622773 source=MG1655 preset=GeneLocation </gbrowseImage>

REL606

NC_012967: 605008..606258
<gbrowseImage> name=NC_012967:605008..606258 source=REL606 preset=GeneLocation </gbrowseImage>

BW2952

NC_012759: 524283..525533
<gbrowseImage> name=NC_012759:524283..525533 source=BW2952 preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 621523..622773
<gbrowseImage> name=NC_007779:621523..622773 source=W3110 preset=GeneLocation </gbrowseImage>

MG1655

13.4 minutes 

MG1655: 1463416..1472037
<gbrowseImage> name=NC_000913:1463416..1472037 source=ecoli preset=GeneLocation </gbrowseImage>

W3110

 

W3110: 1467106..1475727
<gbrowseImage> name=NC_007779:1467106..1475727 source=W3110 preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 560855..562105
<gbrowseImage> name=NC_010473:560855..562105 source=DH10B preset=GeneLocation </gbrowseImage>

DH10B

DH10B: 674115..675365
<gbrowseImage> name=NC_010473:674115..675365 source=DH10B preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes

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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

ybdA::Tn5KAN-I-SceI (FB20207)

Insertion at nt 1174 in Minus orientation

PMID:15262929[3]

E. coli Genome Project:FB20207

contains pKD46

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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes

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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

Plasmid clone

Shigen

PMID:16769691[4]

Status:

Primer 1:

Primer 2:

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:EG11104

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11104

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001092

Escherichia coli str. K-12 substr. MG1655

NCBI (EcoliWiki Page)

GeneID:946268

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1096

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002036

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. Kang, Y et al. (2004) Systematic mutagenesis of the Escherichia coli genome. J. Bacteriol. 186 4921-30 PubMed
  4. Kitagawa, M et al. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12 291-9 PubMed

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