dsbG:Gene Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

DsbG

Synonyms

B0604[1][2], YbdP[1][2] , ECK0598, JW0597, ybdP, b0604

Product description

periplasmic disulfide isomerase/thiol-disulphide oxidase[2]

Thiol-disulphide oxidase; molecular chaperone; multicopy resistance to DTT; mutants accumulate reduced proteins[3]

EC number (for enzymes)

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Notes

Function

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<protect> Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0030288

outer membrane-bounded periplasmic space

C

Seeded from Riley et al 2006 [2].

Missing: evidence, reference

GO:0003756

protein disulfide isomerase activity

PMID:10075670[4]

IGI: Inferred from Genetic Interaction

F

Seeded from EcoCyc (v14.0)

Missing: with/from

GO:0003756

protein disulfide isomerase activity

PMID:9383195[5]

IMP: Inferred from Mutant Phenotype

F

complete

GO:0015035

protein disulfide oxidoreductase activity

PMID:19965429[6]

IMP: Inferred from Mutant Phenotype

F

Seeded from EcoCyc (v14.0)

complete

GO:0042597

periplasmic space

GOA:spkw
SP_KW:GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0574

C

Seeded from EcoCyc (v14.0)

complete

GO:0042597

periplasmic space

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0200

C

Seeded from EcoCyc (v14.0)

complete

Interactions

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

adiY

PMID:16606699[7]

Experiment(s):EBI-1137364

Protein

mnmG

PMID:16606699[7]

Experiment(s):EBI-1137364

Protein

rpsD

PMID:16606699[7]

Experiment(s):EBI-1137364

Protein

yfeT

PMID:16606699[7]

Experiment(s):EBI-1137364

Protein

dnaK

PMID:16606699[7]

Experiment(s):EBI-1137364

Protein

rplC

PMID:16606699[7]

Experiment(s):EBI-1137364

Protein

cysJ

PMID:19402753[8]

LCMS(ID Probability):99.6

Protein

cysM

PMID:19402753[8]

LCMS(ID Probability):99.6

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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes

periplasm

From EcoCyc[9]

Periplasm

PMID:9383195[5]

EchoLocation:dsbG


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Notes

Structure and Physical Properties

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<protect> Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence

at EcoCyc

MTVIGYAFYS TFALTEKDKL MLKKILLLAL LPAIAFAEEL PAPVKAIEKQ GITIIKTFDA
PGGMKGYLGK YQDMGVTIYL TPDGKHAISG YMYNEKGENL SNTLIEKEIY APAGREMWQR
MEQSHWLLDG KKDAPVIVYV FADPFCPYCK QFWQQARPWV DSGKVQLRTL LVGVIKPESP
ATAAAILASK DPAKTWQQYE ASGGKLKLNV PANVSTEQMK VLSDNEKLMD DLGANVTPAI
YYMSKENTLQ QAVGLPDQKT LNIIMGNK
Length

268

Mol. Wt

29.776 kDa

pI

8.4 (calculated)

Extinction coefficient

46,870 - 47,120 (calc based on 13 Y, 5 W, and 2 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

motif

1-17

UniProt Manual:Signal Peptides

UniProt:P77202


<motif_map/>

Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=dsbG taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference

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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (Protein) (EcoliWiki Page)

GI:90111151

Escherichia coli str. K-12 substr. MG1655

NCBI (Protein) (EcoliWiki Page)

GeneID:945224

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002084

Escherichia coli str. K-12 substr. MG1655

UniProt (EcoliWiki Page)

UniProtKB/Swiss-Prot:P77202

Escherichia coli str. K-12 substr. MG1655

EcoCyc

EcoCyc:G6333

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13535

Escherichia coli str. K-12 substr. MG1655

NCBI (Gene) (EcoliWiki Page)

GeneID:945224

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002940

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3306

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. 1.0 1.1 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  2. 2.0 2.1 2.2 2.3 2.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  3. EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  4. Bessette, PH et al. (1999) In vivo and in vitro function of the Escherichia coli periplasmic cysteine oxidoreductase DsbG. J. Biol. Chem. 274 7784-92 PubMed
  5. 5.0 5.1 Andersen, CL et al. (1997) A new Escherichia coli gene, dsbG, encodes a periplasmic protein involved in disulphide bond formation, required for recycling DsbA/DsbB and DsbC redox proteins. Mol. Microbiol. 26 121-32 PubMed
  6. Depuydt, M et al. (2009) A periplasmic reducing system protects single cysteine residues from oxidation. Science 326 1109-11 PubMed
  7. 7.0 7.1 7.2 7.3 7.4 7.5 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
  8. 8.0 8.1 Hu, P et al. (2009) Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. 7 e96 PubMed
  9. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

Categories

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