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Standard Name	Transposon_Tn5 tnp
Gene Synonym(s)
Product Desc.	A Thymidine at position 1442 causes an ochre stop codon which prematurely terminates the protein at this point. Ochre suppressing strains allow readthrough and express a functional product identical to the transposase.
Product Synonyms(s)	p3; Tnp; protein 3
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links
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Notes

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Gene

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Nomenclature

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<protect><protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name	Transposon_Tn5 tnp
Mnemonic
Synonyms
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Notes

Location(s) and DNA Sequence

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<protect><protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain	Genome coordinates	Genome browsers	Sequence links
Transposon Tn5	BM_U00004: 92..1444 <gbrowseImage> name=BM_U00004:92..1444 source=Transposon_Tn5 preset=GeneLocation </gbrowseImage>	GBrowse (Transposon Tn5)	FASTA Dump
Transposon Tn5	BM_U00004: 5727..4297 <gbrowseImage> name=BM_U00004:4297..5727 source=Transposon_Tn5 preset=GeneLocation </gbrowseImage>	GBrowse (Transposon Tn5)	FASTA Dump
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Notes

Sequence Features

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<protect><protect> See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type	Strain	Genomic Location	Evidence	Reference	Notes
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Notes

Alleles and Phenotypes

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<protect><protect> See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele	Nt change(s)	AA change(s)	Phenotype: Type	Phenotype: Description	Reference	Availability	Comments
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Notes

Genetic Interactions

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Interactor	Interaction	Allele	Score(s)	Reference(s)	Accessions	Notes
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Notes

Genetic Resources

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<protect><protect> See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource	Resource Type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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<protect><protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc	EcoCyc:	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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Product(s)

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Nomenclature

<protect><protect> See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name	Transposon_Tn5 protein 3
Synonyms	p3; Tnp; protein 3
Product description	A Thymidine at position 1442 causes an ochre stop codon which prematurely terminates the protein at this point. Ochre suppressing strains allow readthrough and express a functional product identical to the transposase.
EC number (for enzymes)
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Notes

Function

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Gene Ontology

<protect><protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
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Interactions

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Partner Type	Partner	Notes	References	Evidence
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Notes

Localization

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Compartment	Description	Evidence	Reference/Source	Notes
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Notes

Structure and Physical Properties

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Physical Properties

<protect><protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	MITSALHRAA DWAKSVFSSA ALGDPRRTAR LVNVAAQLAK YSGKSITISS EGSEAMQEGA YRFYRNPNVS AEAIRKAGAM QTVKLAQEFP ELLAIEDTTS LSYRHQVAEE LGKLGSIQDK SRGWWVHSVL LLEATTFRTV GLLHQEWWMR PDDPADADEK ESGKWLAAAA TSRLRMGSMM SNVIAVCDRE ADIHAYLQDR LAHNERFVVR SKHPRKDVES GLYLIDHLKN QPELGGYQIS IPQKGVVDKR GKRKNRPARK ASLSLRSGRI TLKQGNITLN AVLAEEINPP KGETPLKWLL LTGEPVESLA QALRVIDIYT HRWRIEEFHK AWKTGAGAER QRMEEPDNLE RMVSILSFVA VRLLQLRESF TLPQALRAQG LLKEAEHVES QSAETVLTPD ECQLLGYLDK GKRKRKEKAG SLQWAYMAIA RLGGFMDSKR TGIASWGALW
Length	450
Mol. Wt	50.489 kDa
pI	9.9 (calculated)
Extinction coefficient	80,900 - 81,150 (calc based on 10 Y, 12 W, and 2 C residues)
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Domains/Motifs/Modification Sites

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Type	Residues	Description	Notes	References
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<motif_map/>

Structure

<protect><protect> See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures
Models
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Structure figures

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Notes

Gene Product Resources

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<protect><protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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<protect><protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc	EcoCyc:	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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Expression

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Overview

Intracellular Levels

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<protect><protect> See Help:Cellular levels

Molecule	Organism or Strain	Value	Units	Experimental Conditions	Assay used	Notes	Reference(s)
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Notes

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)
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Notes

Translation and Regulation of Translation

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Notes

Turnover and Regulation of Turnover

Notes

Experimental

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Mutations Affecting Expression

<protect><protect> See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name	Mutation	Phenotype	Reference
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Expression Studies

<protect><protect> See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type	Reference	Notes
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Expression Resources

<protect><protect> See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name	Resource Type	Description	Source	Notes
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Notes

Accessions Related to Transposon_Tn5_tnp Expression

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<protect><protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc	EcoCyc:	Escherichia coli str. K-12 substr. MG1655
EcoGene	EcoGene:	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:	Escherichia coli str. K-12 substr. MG1655
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Notes

Links

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Name	URL	Comments
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Evolution

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Homologs in Other Organisms

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<protect><protect> See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism	Homologs (Statistics)	Comments
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Do-It-Yourself Web Tools

Notes

Families

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<protect><protect> See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Database	Accession	Notes
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Notes

Links

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Name	URL	Comments
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Transposon Tn5 tnp:On One Page

Quickview

Notes

Gene

Nomenclature

Notes

Location(s) and DNA Sequence

Notes

Sequence Features

Notes

Alleles and Phenotypes

Notes

Genetic Interactions

Notes

Genetic Resources

Notes

Accessions in Other Databases

Notes

Links

Product(s)

Nomenclature

Notes

Function

Gene Ontology

Interactions

Notes

Localization

Notes

Structure and Physical Properties

Physical Properties

Domains/Motifs/Modification Sites

Structure

Structure figures

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

Expression

Overview

Intracellular Levels

Notes

Transcription and Transcriptional Regulation

Notes

Translation and Regulation of Translation

Notes

Turnover and Regulation of Turnover

Notes

Experimental

Mutations Affecting Expression

Expression Studies

Expression Resources

Notes

Accessions Related to Transposon_Tn5_tnp Expression

Notes

Links

Evolution

Homologs in Other Organisms

Do-It-Yourself Web Tools

Notes

Families

Notes

Links

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