Phage T7 12:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

12

Gene Synonym(s)
Product Desc.

tail protein

Product Synonyms(s)
Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links

porteco.png

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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Gene

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Nomenclature

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<protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

12

Mnemonic
Synonyms


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Notes

Location(s) and DNA Sequence

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<protect> <protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

NC_1604: 24743..27327
<gbrowseImage> name=NC_001604:24743..27327 source=bacteriophage_T7 preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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<protect> See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
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Notes

Alleles and Phenotypes

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<protect> See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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<protect> See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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Product(s)

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Nomenclature

<protect> See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

12

Synonyms
Product description

tail protein

EC number (for enzymes)


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Notes

Function

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<protect> Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions <protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

<protect> See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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<protect> Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MALISQSIKN LKGGISQQPD ILRYPDQGSR QVNGWSSETE GLQKRPPLVF LNTLGDNGAL
GQAPYIHLIN RDEHEQYYAV FTGSGIRVFD LSGNEKQVRY PNGSNYIKTA NPRNDLRMVT
VADYTFIVNR NVVAQKNTKS VNLPNYNPNQ DGLINVRGGQ YGRELIVHIN GKDVAKYKIP
DGSQPEHVNN TDAQWLAEEL AKQMRTNLSD WTVNVGQGFI HVTAPSGQQI DSFTTKDGYA
DQLINPVTHY AQSFSKLPPN APNGYMVKIV GDASKSADQY YVRYDAERKV WTETLGWNTE
DQVLWETMPH ALVRAADGNF DFKWLEWSPK SCGDVDTNPW PSFVGSSIND VFFFRNRLGF
LSGENIILSR TAKYFNFYPA SIANLSDDDP IDVAVSTNRI AILKYAVPFS EELLIWSDEA
QFVLTASGTL TSKSVELNLT TQFDVQDRAR PFGIGRNVYF ASPRSSFTSI HRYYAVQDVS
SVKNAEDITS HVPNYIPNGV FSICGSGTEN FCSVLSHGDP SKIFMYKFLY LNEELRQQSW
SHWDFGENVQ VLACQSISSD MYVILRNEFN TFLARISFTK NAIDLQGEPY RAFMDMKIRY
TIPSGTYNDD TFTTSIHIPT IYGANFGRGK ITVLEPDGKI TVFEQPTAGW NSDPWLRLSG
NLEGRMVYIG FNINFVYEFS KFLIKQTADD GSTSTEDIGR LQLRRAWVNY ENSGTFDIYV
ENQSSNWKYT MAGARLGSNT LRAGRLNLGT GQYRFPVVGN AKFNTVYILS DETTPLNIIG
CGWEGNYLRR SSGI
Length

794

Mol. Wt

89.397 kDa

pI

6.1 (calculated)

Extinction coefficient

150,120 - 150,745 (calc based on 38 Y, 17 W, and 5 C residues)

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Domains/Motifs/Modification Sites

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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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<motif_map/>

Structure
<protect> See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=Phage_T7_12 taxon=10760 </beststructure>

Models

View models at:

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Structure figures

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Notes

Gene Product Resources

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<protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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Expression

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Overview

Cellular Levels

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See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)
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Notes

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)
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Notes

Translation and Regulation of Translation

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<protect><gbrowseImage> name=NC_001604:24823..24863 source=bacteriophage_T7 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

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Notes

Turnover and Regulation of Turnover

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Notes

Experimental

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<protect> Mutations Affecting Expression <protect> See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies <protect> See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes
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Expression Resources <protect> See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to Phage T7 12 Expression

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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Evolution

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Homologs in Other Organisms

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<protect> See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments
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Do-It-Yourself Web Tools

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Notes

Families

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<protect> See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Database Accession Notes
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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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