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Gene |

Product(s) |

Expression|

Evolution |

References |

Quickview

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Quickview

Standard Name	A1
Gene Synonym(s)
Product Desc.	involved in degradation of host DNA and required for shutoff of expression of host genes and phage pre-early genes; A1 and A2 proteins are required for transfer of phage DNA to host cell; experimental evidence, no additional details recorded
Product Synonyms(s)
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links
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Notes

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References

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See Help:References for how to manage references in EcoliWiki.

Gene

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Gene

Location(s) and DNA Sequence

Sequence Features

Alleles and Phenotypes

Nomenclature

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<protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name	A1
Mnemonic
Synonyms
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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain	Map location	Genome coordinates	Genome browsers	Sequence links
		NC_005859: 0..6716 <gbrowseImage> name=NC_005859:0..6716 source= bacteriophage_T5 preset=GeneLocation </gbrowseImage>	GBrowse (Phage_T5)	FASTA Dump
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Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type	Strain	Genomic Location	Evidence	Reference	Notes
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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele	Nt change(s)	AA change(s)	Phenotype: Type	Phenotype: Description	Reference	Availability	Comments
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Notes

Genetic Interactions

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Interactor	Interaction	Allele	Score(s)	Reference(s)	Accessions	Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource	Resource Type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
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Notes

Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

Categories

Product(s)

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Gene Product(s)

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name	A1
Synonyms
Product description	involved in degradation of host DNA and required for shutoff of expression of host genes and phage pre-early genes; A1 and A2 proteins are required for transfer of phage DNA to host cell; experimental evidence, no additional details recorded
EC number (for enzymes)
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Notes

Function

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Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
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Interactions

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
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</protect>

Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Reference/Source	Notes
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Notes

Structure and Physical Properties

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Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	MVISAEKQTV ILKMAADFNF YGKRLRATKL EVCDDISKMV YDTTKHSTAI CDWLEANKPA KPKAAKVAKA IKNDERPEAA GIVSSTVEQW EVKQGKRFII TSIQNNTFPH KNFLASLEQY AQFIGADLLV SKFIYNKNGF QNGEGADGIR YDSAFDKYIC NKNVFLNNRR FAFMAEINVL PTADYPLSGF AETATALNLE GLAIGAAKIT AESVPALKGE IVRRMYSTGT ATLKNYIQQK AGQKAEALHN FGALIVEFDE DGEFFVRQLE TMDESGVFYD LNTCATPAGC YETTGHVLGL QYGDIHAEKL DEECAAASWG HGDTYGLVDI LKPKYQFVHD VHDFTSRNHH NRASGVFLAK QYAAGRDKVL DDLIDTGRVL ESMERDFSQT IIVESNHDLA LSRWLDDRNA NIKDDPANAE LYHRLNAAIY GAIAEKDDTF NVLDYALRKV AGCEFNAIFL TTDQSFKIAG IECGVHGHNG INGSRGNPKQ FKKLGKLNTG HTHTASIYGG VYTAGVTGSL DMGYNVGASS WTQTHIITYA NGQRTLIDFK NGKFFA
Length	556
Mol. Wt	61.464 kDa
pI	6.8 (calculated)
Extinction coefficient	60,280 - 61,280 (calc based on 22 Y, 5 W, and 8 C residues)
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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type	Residues	Description	Notes	References
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<motif_map/>

Structure

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=Phage_T5_A1 taxon=10726 </beststructure>

Models

View models at:

PSI-PRED
Genomes TO Protein (GTOP)

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
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Notes

Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

Categories

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Expression

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Expression

Overview

Cellular Levels

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See Help:Cellular levels

Molecule	Organism or Strain	Value	Units	Experimental Conditions	Assay used	Notes	Reference(s)
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Notes

Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)
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|} </protect>

Notes

Translation and Regulation of Translation

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<gbrowseImage> name=NC_005859:3356..3396 source= bacteriophage_T5 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.