Phage T4 gp47:On One Page

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview

Gene

Gene Product(s)

Expression

Evolution

On One Page

Quickview |

Gene |

Product(s) |

Expression|

Evolution |

References |

Quickview

[back to top]

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview

Gene

Gene Product(s)

Expression

Evolution

On One Page

References

Suggestions

Standard Name	gp47
Gene Synonym(s)
Product Desc.	gp46/gp47 subunit required for recombination and host-DNA degradation
Product Synonyms(s)
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links
edit table

Notes

[back to top]

References

[back to top]

See Help:References for how to manage references in EcoliWiki.

Gene

[back to top]

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview

Gene

Gene Product(s)

Expression

Evolution

On One Page

Nomenclature

Location(s) and DNA Sequence

Sequence Features

Alleles and Phenotypes

Genetic Interactions

Genetic Resources

Accessions

Links

References

Suggestions

Nomenclature

[back to top]

<protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name	gp47
Mnemonic
Synonyms
edit table

</protect>

Location(s) and DNA Sequence

[back to top]

<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain	Map location	Genome coordinates	Genome browsers	Sequence links
		NC_000866: 33390..38485 <gbrowseImage> name=NC_000866:33390..38485 source= bacteriophage_T4 preset=GeneLocation </gbrowseImage>	GBrowse (Phage_T4)	FASTA Dump
edit table

</protect>

Sequence Features

[back to top]

See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type	Strain	Genomic Location	Evidence	Reference	Notes
edit table

Alleles and Phenotypes

[back to top]

See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele	Nt change(s)	AA change(s)	Phenotype: Type	Phenotype: Description	Reference	Availability	Comments
edit table

Genetic Interactions

[back to top]

Interactor	Interaction	Allele	Score(s)	Reference(s)	Accessions	Notes
edit table

Genetic Resources

[back to top]

See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource	Resource Type	Source	Notes/Reference
edit table

Accessions in Other Databases

[back to top]

See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
edit table

Links

[back to top]

Name	URL	Comments
edit table

References

[back to top]

See Help:References for how to manage references in EcoliWiki.

Product(s)

[back to top]

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview

Gene

Gene Product(s)

Expression

Evolution

On One Page

Nomenclature

Function

Interactions

Localization

Sequence

Domains

Structure

Resources

Accessions

Links

References

Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name	gp47 recombination endonuclease subunit
Synonyms
Product description	gp46/gp47 subunit required for recombination and host-DNA degradation
EC number (for enzymes)
edit table

Function

[back to top]

Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
edit table

Interactions

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
edit table

</protect>

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment	Description	Evidence	Reference/Source	Notes
edit table

Structure and Physical Properties

[back to top]

Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence	MKILNLGDWH LGVKADDEWI RGIQIDGIKQ AIEYSKKNGI TTWIQYGDIF DVRKAITHKT MEFAREIVQT LDDAGITLHT IVGNHDLHYK NVMHPNASTE LLAKYPNVKV YDKPTTVDFD GCLIDLIPWM CEENTGEILE HIKTSSASFC VGHWELNGFY FYKGMKSHGL EPDFLKTYKE VWSGHFHTIS EAANVRYIGT PWTLTAGDEN DPRGFWMFDT ETERTEFIPN NTTWHRRIHY PFKGKIDYKD FTNLSVRVIV TEVDKNLTKF ESELEKVVHS LRVVSKIDNS VESDDSEEVE VQSLQTLMEE YINAIPDITD SDREALIQYA NQLYVEATQ
Length	339
Mol. Wt	39.166 kDa
pI	5.0 (calculated)
Extinction coefficient	70,360 - 70,735 (calc based on 14 Y, 9 W, and 3 C residues)
edit table

Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki. Type Residues Description Notes References edit table

<motif_map/>

Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki. Structures <beststructure> gene=Phage_T4_gp47 taxon=10665 </beststructure> Models View models at: PSI-PRED Genomes TO Protein (GTOP) edit table

</protect> Structure figures Notes Gene Product Resources [back to top] See Help:Product_resources for help with entering or editing information in this section of EcoliWiki. Resource type Source Notes/Reference edit table Notes Accessions in Other Databases [back to top] See Help:Gene_accessions for help with entering information into the Gene Accessions table. Database Accession Notes edit table Notes Links [back to top] Name URL Comments edit table References [back to top] See Help:References for how to manage references in EcoliWiki. Categories [back to top] Expression [back to top] {{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css> Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page     Overview Transcription Translation Turnover Experimental Links References Suggestions Overview Cellular Levels [back to top] See Help:Cellular levels Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s) edit table Notes Transcription and Transcriptional Regulation [back to top] <protect> See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki. Transcription unit(s) edit table |} </protect> Notes Translation and Regulation of Translation [back to top] <gbrowseImage> name=NC_000866:36427..36467 source= bacteriophage_T4 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus. Notes Turnover and Regulation of Turnover </protect> Notes Experimental [back to top] Mutations Affecting Expression <protect> See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki. Allele Name Mutation Phenotype Reference edit table Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki. Type Reference Notes edit table Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki. Resource Name Resource Type Description Source Notes edit table Notes Accessions Related to Phage_T4_gp47 Expression [back to top] See Help:Gene_accessions for help with entering information into the Gene Accessions table. Database Accession Notes edit table Notes Links [back to top] Name URL Comments edit table References [back to top] See Help:References for how to manage references in EcoliWiki. Categories [back to top] Evolution [back to top] {{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css> Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page     Homologs Families Links References Suggestions Homologs in Other Organisms [back to top] See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki. Organism Homologs (Statistics) Comments edit table Do-It-Yourself Web Tools BLAST CDD InParanoid YOGY Notes Families [back to top] See Help:Evolution_families for help entering or editing information in this section of EcoliWiki. Database Accession Notes edit table Notes Links [back to top] Name URL Comments edit table References [back to top] See Help:References for how to manage references in EcoliWiki. Categories [back to top]