Phage T4 18:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

18

Gene Synonym(s)
Product Desc.

outer contractile sheath protein of phage tail

Product Synonyms(s)
Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links



        

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Notes

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References

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Gene

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Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

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<protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

18

Mnemonic
Synonyms


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</protect>

Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

NC_000866: 94578..104473
<gbrowseImage> name=NC_000866:94578..104473 source= bacteriophage_T4 preset=GeneLocation </gbrowseImage>

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</protect>

Notes

Sequence Features

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Feature Type Strain Genomic Location Evidence Reference Notes
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Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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Resource Resource Type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes
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Notes

Links

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References

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Categories

Product(s)

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

gp18 tail sheath protein

Synonyms
Product description

outer contractile sheath protein of phage tail

EC number (for enzymes)


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Notes

Function

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Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0098027

virus tail, sheath

PMID:4580679[1]

IGI: Inferred from Genetic Interaction

EcoliWiki:Phage_T4_23


C

Tails were isolated from gene 23 T4 mutants (capsid mutant).

complete

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Interactions

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Partner Type Partner Notes References Evidence
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</protect>

Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MTLLSPGIEL KETTVQSTVV NNSTGTAALA GKFQWGPAFQ IKQVTNEVDL VNTFGQPTAE
TADYFMSAMN FLQYGNDLRV VRAVDRDTAK NSSPIAGNID YTISTPGSNY AVGDKITVKY
VSDDIETEGK ITEVDADGKI KKINIPTGKN YAKAKEVGEY PTLGSNWTAE ISSSSSGLAA
VITLGKIITD SGILLAEIEN AEAAMTAVDF QANLKKYGIP GVVALYPGEL GDKIEIEIVS
KADYAKGASA LLPIYPGGGT RASTAKAVFG YGPQTDSQYA IIVRRNDAIV QSVVLSTKRG
EKDIYDSNIY IDDFFAKGGS EYIFATAQNW PEGFSGILTL SGGLSSNAEV TAGDLMEAWD
FFADRESVDV QLFIAGSCAG ESLETASTVQ KHVVSIGDAR QDCLVLCSPP RETVVGIPVT
RAVDNLVNWR TAAGSYTDNN FNISSTYAAI DGNHKYQYDK YNDVNRWVPL AADIAGLCAR
TDNVSQTWMS PAGYNRGQIL NVIKLAIETR QAQRDRLYQE AINPVTGTGG DGYVLYGDKT
ATSVPSPFDR INVRRLFNML KTNIGRSSKY RLFELNNAFT RSSFRTETAQ YLQGNKALGG
IYEYRVVCDT TNNTPSVIDR NEFVATFYIQ PARSINYITL NFVATATGAD FDELTGLAG
Length

659

Mol. Wt

71.332 kDa

pI

4.8 (calculated)

Extinction coefficient

84,690 - 85,315 (calc based on 31 Y, 7 W, and 5 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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<motif_map/>

Structure

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Structures

<beststructure> gene=Phage_T4_18 taxon=10665 </beststructure>

Models

View models at:

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</protect>

Structure figures

Notes

Gene Product Resources


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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links



References


See Help:References for how to manage references in EcoliWiki.

  1. ↑ King, J & Laemmli, UK (1973) Bacteriophage T4 tail assembly: structural proteins and their genetic identification. J. Mol. Biol. 75 315-37 PubMed

Categories


Expression


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Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

Cellular Levels


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Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)
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Notes

Transcription and Transcriptional Regulation


<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)
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|} </protect>

Notes

Translation and Regulation of Translation


<gbrowseImage> name=NC_000866:98516..98556 source= bacteriophage_T4 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.


Notes

Turnover and Regulation of Turnover

</protect>

Notes

Experimental


Mutations Affecting Expression <protect> See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies

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Type Reference Notes
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Expression Resources

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Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to Phage_T4_18 Expression


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Database Accession Notes
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Notes

Links



References


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Evolution


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Homologs Families Links References Suggestions

Homologs in Other Organisms


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Organism Homologs (Statistics) Comments
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Do-It-Yourself Web Tools


Notes

Families


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Database Accession Notes
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Notes

Links



References


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Categories


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