Phage N4 66:On One Page
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Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
Quickview | | Gene | | Product(s) | | Expression| | Evolution | | References | |
Quickview
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Standard Name |
66 |
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Gene Synonym(s) | |
Product Desc. |
60 kDa protein [1] |
Product Synonyms(s) | |
Function from GO |
<GO_nr /> |
Knock-Out Phenotype | |
Regulation/Expression | |
Regulation/Activity | |
Quick Links | |
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Notes
Gene
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Nomenclature
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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
Standard name |
66 |
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Mnemonic | |
Synonyms | |
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Notes
Location(s) and DNA Sequence
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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
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NC_8720: 66003..64133 |
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Notes
Sequence Features
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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
Feature Type | Strain | Genomic Location | Evidence | Reference | Notes |
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Notes
Alleles and Phenotypes
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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
Allele | Nt change(s) | AA change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
---|---|---|---|---|---|---|---|
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Notes
Genetic Interactions
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Interactor | Interaction | Allele | Score(s) | Reference(s) | Accessions | Notes |
---|---|---|---|---|---|---|
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Notes
Genetic Resources
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See Help:Gene_resources for help entering information into the Genetic Resources table.
Resource | Resource Type | Source | Notes/Reference |
---|---|---|---|
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Notes
Accessions in Other Databases
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See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
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Notes
Links
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Name | URL | Comments |
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Product(s)
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Nomenclature
<protect> See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Standard name |
66 |
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Synonyms | |
Product description |
60 kDa protein [1] |
EC number (for enzymes) |
|
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Notes
Function
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Gene Ontology
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See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
---|---|---|---|---|---|---|---|---|
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Interactions
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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Partner Type | Partner | Notes | References | Evidence |
---|---|---|---|---|
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Notes
Localization
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Compartment | Description | Evidence | Reference/Source | Notes |
---|---|---|---|---|
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Notes
Structure and Physical Properties
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Physical Properties
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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Name | |
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Sequence |
MSGHTPFNTI PNEGYCCETL NDPIVDKMIG NAYYVVKFVA LRMPFIKNVS DNMTQLLAIH NKLTELSAIY TKLDELQLIH NNLDKLQELY NQLSKLTGLY DNLQALLRVY DNLTPINTVA SNIDAVNTVA TDIAKVIIVS AQIDKVITVA NSITNVNTVA GSIDAVNTVS TNINAIKNVN TNMAALLDLD NHMTELLAVH ARLGDLVTIA EQLDTIIADH EKYATAEGAG LIGFNQAQTY AANTVGAMLR QVITMGNDKG GYAVAGKLTS ARGVWSLATG SINMNAPTAG AVANLVLNYK AGKVSGLLVA PSQQMALDGL IMGASTADNT ATVSVTAPLR FKADLTAKTI SGVNTRIMPS SAVTLNVDAY GGITLGYPPS LQTVEPVMTF ITPTGKAPLT PRFSSVTAGA AVLVMVGEAE AQLKYSGGGW AAVSDWDSGT YCAFDTVSGE LTVYHSTLIK DSTVTFSLLL PTDDTQLTAQ LKSHTDSSFV VKIAKPDGSL LDAPLEGMGI MYSRGMHGIY KVPYGSLIVD VGRVQVKFSE FNTTEGISVV GINSNA |
Length |
556 |
Mol. Wt |
58.9 kDa |
pI |
5.2 (calculated) |
Extinction coefficient |
44,810 - 45,185 (calc based on 19 Y, 3 W, and 3 C residues) |
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Domains/Motifs/Modification Sites
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
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<motif_map/> |
Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Resource type | Source | Notes/Reference |
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Notes
Accessions in Other Databases
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See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
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Notes
Links
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Name | URL | Comments |
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Expression
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Overview
Cellular Levels
Molecule | Organism or Strain | Value | Units | Experimental Conditions | Assay used | Notes | Reference(s) |
---|---|---|---|---|---|---|---|
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Notes
Transcription and Transcriptional Regulation
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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.
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Notes
Translation and Regulation of Translation
<protect><gbrowseImage>
name=NC_008720:65883..65923
source=bacteriophage_N4
flip=1
type=Gene+DNA_+Protein
preset=Nterminus
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This picture shows the sequence around the N-terminus.
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Notes
Turnover and Regulation of Turnover
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Notes
Experimental
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Mutations Affecting Expression
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See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.
Allele Name | Mutation | Phenotype | Reference |
---|---|---|---|
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Expression Studies
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See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.
Type | Reference | Notes |
---|---|---|
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Expression Resources
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See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.
Resource Name | Resource Type | Description | Source | Notes |
---|---|---|---|---|
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Notes
Accessions Related to Phage N4 66 Expression
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See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
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Notes
Links
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Name | URL | Comments |
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Evolution
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Homologs in Other Organisms
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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.
Organism | Homologs (Statistics) | Comments |
---|---|---|
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Do-It-Yourself Web Tools
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Notes
Families
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See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.
Database | Accession | Notes |
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Notes
Links
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Name | URL | Comments |
---|---|---|
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 NCBI: Enterobacteria phage N4, complete genome
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