Phage N4 51:On One Page
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
Quickview | | Gene | | Product(s) | | Expression| | Evolution | | References | |
Quickview
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;}
h2 .editsection { display:none;}</css>
<protect><protect>
Standard Name |
51 |
---|---|
Gene Synonym(s) | |
Product Desc. |
66 kDa protein [1] |
Product Synonyms(s) | |
Function from GO |
<GO_nr /> |
Knock-Out Phenotype | |
Regulation/Expression | |
Regulation/Activity | |
Quick Links | |
edit table |
</protect></protect> See Help:Quickview for help with entering information in the Quickview table. <protect></protect>
Notes
Gene
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;}
h2 .editsection { display:none;}</css>
<protect>
Nomenclature
<protect>
See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.
Standard name |
51 |
---|---|
Mnemonic | |
Synonyms | |
edit table |
</protect>
</protect>
Notes
Location(s) and DNA Sequence
<protect>
<protect>
See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.
Strain | Map location | Genome coordinates | Genome browsers | Sequence links |
---|---|---|---|---|
NC_8720: 47160..45026 |
||||
edit table |
</protect>
</protect>
Notes
Sequence Features
<protect>
See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.
Feature Type | Strain | Genomic Location | Evidence | Reference | Notes |
---|---|---|---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Alleles and Phenotypes
<protect>
See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.
Allele | Nt change(s) | AA change(s) | Phenotype: Type | Phenotype: Description | Reference | Availability | Comments |
---|---|---|---|---|---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Genetic Interactions
<protect>
Interactor | Interaction | Allele | Score(s) | Reference(s) | Accessions | Notes |
---|---|---|---|---|---|---|
edit table |
</protect>
Notes
Genetic Resources
<protect>
See Help:Gene_resources for help entering information into the Genetic Resources table.
Resource | Resource Type | Source | Notes/Reference |
---|---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Accessions in Other Databases
<protect>
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Links
<protect>
Name | URL | Comments |
---|---|---|
edit table |
</protect>
Product(s)
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;}
h2 .editsection { display:none;}</css>
Nomenclature
<protect> See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
Standard name |
51 |
---|---|
Synonyms | |
Product description |
66 kDa protein [1] |
EC number (for enzymes) |
|
edit table |
</protect>
<protect></protect>
Notes
Function
<protect>
Gene Ontology
<protect>
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
---|---|---|---|---|---|---|---|---|
edit table |
</protect>
Interactions
<protect>
See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
Partner Type | Partner | Notes | References | Evidence |
---|---|---|---|---|
edit table |
</protect>
</protect>
Notes
Localization
<protect> See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
Compartment | Description | Evidence | Reference/Source | Notes |
---|---|---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Structure and Physical Properties
<protect>
Physical Properties
<protect>
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
Name | |
---|---|
Sequence |
MAQITWRNVD APSFSGVGDS IRTFSNMLGN ATAGLSNALG DFRNSARQQA GDAIMAEAMR YQDPNEYRNA LASGALFAGY DPSLISSRTM ENLDNRAGNL LDQASKQQNL DFTRYSNDRT MKVNAATDAA APALQELALA YQSGDPRKVQ AAQAQYGDVL KTLPAGIVMD YMNNLQGQGT AGIGQRRSLF NLGVDMRNDA DTQAAMQLLN NIRRGAYSSD DARMLAEGTF DQMSPGAVSR ALSQLDRAYP GAYTPGTGSA PLSPPGTHGT RNGSAYDTTY KFTPTDVPIT QMNLGEVVQH QDTMKKTLGA SPVGAYQINQ DTLKDFAPKV FGENWQNIPM SPENQDKLGE AIFNARKNGN LKSTWAALPD DTPGAYKNLS WDEMKDYIAQ AETGNSINPL QEQAFTSVAG NTVGTRNMQN IGNTLLPEYQ AATVDPSTTG QVAKRIIDSN ELKGINQGAL VRQINEVAKQ NAISPAMAGA IIQRSITGKP EGWFSGIRNA FDTDVIDLGG DYQLDKAAVE ANAKLATTGT AIEQNARNQL TAQIQSNIYA AQNTLDTALA DLREVQRRIQ TGQENLRSVL PRYQERVNTA KRLLDGARSA VAADPQNLDI KSLQNIKQEE SEANRRSLGR DAGRRLGIPD IFPR |
Length |
644 |
Mol. Wt |
69.733 kDa |
pI |
5.4 (calculated) |
Extinction coefficient |
55,810 (calc based on 19 Y, 5 W, and 0 C residues) |
edit table |
</protect>
Domains/Motifs/Modification Sites
<protect>
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
Structure
</protect> | </protect>
Structure figures<protect> | ||||||
Notes
Gene Product Resources
<protect>
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
Resource type | Source | Notes/Reference |
---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Accessions in Other Databases
<protect>
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Links
<protect>
Name | URL | Comments |
---|---|---|
edit table |
</protect>
Expression
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;}
h2 .editsection { display:none;}</css>
Overview
Cellular Levels
Molecule | Organism or Strain | Value | Units | Experimental Conditions | Assay used | Notes | Reference(s) |
---|---|---|---|---|---|---|---|
edit table |
Notes
Transcription and Transcriptional Regulation
<protect>
<protect>
See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.
</protect> |
</protect>
Notes
Translation and Regulation of Translation
<protect><gbrowseImage>
name=NC_008720:47040..47080
source=bacteriophage_N4
flip=1
type=Gene+DNA_+Protein
preset=Nterminus
</gbrowseImage>
This picture shows the sequence around the N-terminus.
</protect>
Notes
Turnover and Regulation of Turnover
</protect>
Notes
Experimental
<protect>
Mutations Affecting Expression
<protect>
See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.
Allele Name | Mutation | Phenotype | Reference |
---|---|---|---|
edit table |
</protect>
Expression Studies
<protect>
See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.
Type | Reference | Notes |
---|---|---|
edit table |
</protect>
Expression Resources
<protect>
See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.
Resource Name | Resource Type | Description | Source | Notes |
---|---|---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Accessions Related to Phage N4 51 Expression
<protect>
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
Database | Accession | Notes |
---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Links
<protect>
Name | URL | Comments |
---|---|---|
edit table |
</protect>
Evolution
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;}
h2 .editsection { display:none;}</css>
Homologs in Other Organisms
<protect>
See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.
Organism | Homologs (Statistics) | Comments |
---|---|---|
edit table |
</protect>
Do-It-Yourself Web Tools
<protect></protect>
Notes
Families
<protect>
See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.
Database | Accession | Notes |
---|---|---|
edit table |
</protect>
<protect></protect>
Notes
Links
<protect>
Name | URL | Comments |
---|---|---|
edit table |
</protect>
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 NCBI: Enterobacteria phage N4, complete genome
http://www.ncbi.nlm.nih.gov/nuccore/NC_008720 Cite error: Invalid
<ref>
tag; name "NC_008720" defined multiple times with different content Cite error: Invalid<ref>
tag; name "NC_008720" defined multiple times with different content Cite error: Invalid<ref>
tag; name "NC_008720" defined multiple times with different content Cite error: Invalid<ref>
tag; name "NC_008720" defined multiple times with different content Cite error: Invalid<ref>
tag; name "NC_008720" defined multiple times with different content Cite error: Invalid<ref>
tag; name "NC_008720" defined multiple times with different content Cite error: Invalid<ref>
tag; name "NC_008720" defined multiple times with different content Cite error: Invalid<ref>
tag; name "NC_008720" defined multiple times with different content Cite error: Invalid<ref>
tag; name "NC_008720" defined multiple times with different content
Categories