Phage Mu H:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

Quickview

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

H

Gene Synonym(s)

Phage_Mu_H, Phage_Mu_29

Product Desc.

gp29; Haemophilus influenzae HI1501 homolog;

Product Synonyms(s)
Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links



        


Notes

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References

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Gene

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Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

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<protect> See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

H

Mnemonic
Synonyms

Phage_Mu_H, Phage_Mu_29

</protect>

Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

NC_000929: 11478..19168
<gbrowseImage> name=NC_000929:11478..19168 source=bacteriophage_Mu preset=GeneLocation </gbrowseImage>

</protect>

Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes


Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments


Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes


Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference


Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

NCBI (EcoliWiki Page)

GeneID:2636304



Notes

Links

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References

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Categories

Product(s)

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Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

Hypothetical protein

Synonyms
Product description

gp29; Haemophilus influenzae HI1501 homolog;

EC number (for enzymes)



Notes

Function

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Gene Ontology <protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status


Interactions

See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

</protect>

Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Reference/Source Notes


Notes

Structure and Physical Properties

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Physical Properties <protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence
MGRILDISGQ PFDFDDEMQS RSDELAMVMK RTQEHPSSGV TPNRAAQMLR DAERGDLTAQ
ADLAFDMEEK DTHLFSELSK RRLAIQALEW RIAPARDASA QEKKDADMLN EYLHDAAWFE
DALFDAGDAI LKGYSMQEIE WGWLGKMRVP VALHHRDPAL FCANPDNLNE LRLRDASYHG
LELQPFGWFM HRAKSRTGYV GTNGLVRTLI WPFIFKNYSV RDFAEFLEIY GLPMRVGKYP
TGSTNREKAT LMQAVMDIGR RAGGIIPMGM TLDFQSAADG QSDPFMAMIG WAEKAISKAI
LGGTLTTEAG DKGARSLGEV HDEVRREIRN ADVGQLARSI NRDLIYPLLA LNSDSTIDIN
RLPGIVFDTS EAGDITALSD AIPKLAAGMR IPVSWIQEKL HIPQPVGDEA VFTIQPVVPD
NGSQKEAALS AEDIPQEDDI DRMGVSPEDW QRSVDPLLKP VIFSVLKDGP EAAMNKAASL
YPQMDDAELI DMLTRAIFVA DIWGRLDAAA DH
Length

512

Mol. Wt

56.89 kDa

pI

4.7 (calculated)

Extinction coefficient

68,410 - 68,535 (calc based on 9 Y, 10 W, and 1 C residues)


Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References

<motif_map/>

Structure

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=Phage_Mu_29 taxon=10677 </beststructure>

Models

View models at:

</protect>

Structure figures

Notes

Gene Product Resources


See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference


Notes

Accessions in Other Databases


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes


Notes

Links



References


See Help:References for how to manage references in EcoliWiki.


Categories


Expression


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Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

Cellular Levels


See Help:Cellular levels

Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)


Notes

Transcription and Transcriptional Regulation


<protect>

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Transcription unit(s)

|} </protect>

Notes

Translation and Regulation of Translation


<gbrowseImage> name=NC_000929:14534..14574 source=bacteriophage_Mu type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.


Notes

Turnover and Regulation of Turnover

</protect>

Notes

Experimental


Mutations Affecting Expression <protect> See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference


Expression Studies

See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type Reference Notes


Expression Resources

See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes


Notes

Accessions Related to Phage_Mu_H Expression


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes


Notes

Links



References


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Categories


Evolution


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Homologs Families Links References Suggestions

Homologs in Other Organisms


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Organism Homologs (Statistics) Comments


Do-It-Yourself Web Tools


Notes

Families


See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Database Accession Notes


Notes

Links



References


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Categories