GO Team Annotation Records
Contents
Annotations done August 2008
<protect>
| Gene Product | Function Terms | Process Terms | Component Terms | Curator | Most recent annotation |
|---|---|---|---|---|---|
|
MdtK |
2 |
AZ |
8/1/08 | ||
|
AtpB (subunit a of Fo) |
1 |
1 |
1 |
BMK |
8/5/08 |
|
TasA |
1 |
AZ |
8/1/08 check annotation-may be a peptidase | ||
| edit table |
</protect>
Annotations done July 2008
<protect>
| Gene Product | Function Terms | Process Terms | Component Terms | Curator | Most recent annotation |
|---|---|---|---|---|---|
|
GadA |
1 |
GSK |
7/3/08 | ||
|
GadB |
1 |
GSK |
7/3/08 | ||
|
GabD |
1 |
GSK |
7/3/08 | ||
|
AtoD |
1 |
GSK |
7/3/08 | ||
|
AdhE |
2 |
BKM |
7/3/08 | ||
|
MurA |
1 |
BKM |
7/3/08 | ||
| edit table |
</protect>
Annotations Done June 2008
<protect>
| Gene Product | Function Term(s) | Process Term(s) | Component Term(s) | Curator | Date of most recent annotation |
|---|---|---|---|---|---|
|
BacA |
2 |
BKM |
6/18/08 | ||
|
DdlA |
2 |
BKM |
6/19/08 | ||
|
DdlB |
1 |
BKM |
6/19/08 | ||
|
DnaJ |
1 |
AZ |
6/18/08 | ||
|
EmtA |
1 |
BKM |
6/30/08 | ||
|
FtsI |
2 |
1 |
1 |
BKM |
6/19/08 |
|
FtsN |
1 |
1 |
BKM |
6/18/08 | |
|
Mpl |
1 |
1 |
BKM |
6/30/08 | |
|
MraY |
1 |
BKM |
6/17/08 | ||
|
MurC |
1 |
BKM |
6/17/08 | ||
|
MurE |
1 |
BKM |
6/17/08 | ||
|
MurF |
1 |
BKM |
6/17/08 | ||
|
MurG |
1 |
BKM |
6/17/08 | ||
|
NuoA |
1 |
DAS |
6/8/08 | ||
|
PBP1a (MrcA) |
1 |
BKM |
6/16/08 | ||
|
PBP1b (MrcB) |
2 |
BKM |
6/16/08 | ||
|
PBP5 (DacA) |
2 |
BKM |
6/17/08 | ||
|
PcnB |
1 |
BKM |
6/16/08 | ||
|
PurA |
1 |
1 |
AZ |
6/18/08 | |
|
PurF |
1 |
GSK |
6/18/08 | ||
|
RpsJ (S10) |
1 |
DAS |
6/19/08 | ||
|
TpiA |
1 |
1 |
DAS |
6/18/08 | |
|
YgaF |
1 |
GSK |
6/16/08 | ||
| edit table |
</protect>
<protect>
| Gene Product | Qualifier | GO ID | GO term name | Aspect | Reference | Annotator Name | Date |
|---|---|---|---|---|---|---|---|
|
NuoA |
Contributes to |
GO:0003954 |
NADH dehydrogenase activity |
F |
DAS |
6/8/08 | |
|
YgaF |
GO:0034419 |
L-2-hydroxyglutarate oxidase activity |
F |
GSK |
June 16, 2008 | ||
|
pcnB |
GO:0004652 |
polynucleotide adenylyltransferase activity |
F |
BKM |
6/16/08 | ||
|
PBP1a |
GO:0009002 |
serine-type D-Ala-D-Ala carboxypeptidase activity |
F |
BKM |
6/16/08 | ||
|
PBP1b |
GO:0008955 |
peptidoglycan glycosyltransferase activity |
F |
BKM |
6/16/08 | ||
|
PBP1b |
GO:0009002 |
serine-type D-Ala-D-Ala carboxypeptidase activity |
F |
BKM |
6/16/08 | ||
|
MurC |
GO:0008763 |
UDP-N-acetylmuramate-L-alanine ligase activity |
F |
BKM |
6/17/08 | ||
|
MurE |
GO:0047482 |
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase activity |
F |
BKM |
6/17/08 | ||
|
MurF |
GO:0047480 |
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity |
F |
BKM |
6/17/08 | ||
|
MraY |
GO:0008963 |
phospho-N-acetylmuramoyl-pentapeptide-transferase activity |
F |
BKM |
6/17/08 | ||
|
MurG |
GO:0050511 |
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity |
F |
BKM |
6/17/07 | ||
|
PBP5 |
GO:0009002 |
serine-type D-Ala-D-Ala carboxypeptidase activity |
F |
BKM |
6/17/08 | ||
|
PBP5 |
GO:0009002 |
serine-type D-Ala-D-Ala carboxypeptidase activity |
F |
BKM |
6/17/08 | ||
|
BacA |
GO:0050380 |
undecaprenyl-diphosphatase activity |
F |
BKM |
6/18/08 | ||
|
BacA |
GO:0042493 |
response to drug |
P |
BKM |
6/18/08 | ||
|
purF |
GO:0004044 |
amidophosphoribosyltransferase activity |
F |
GSK |
June 18, 2008 | ||
|
dnaJ |
GO:0003756 |
protein disulfide isomerase activity |
F |
AZ |
6-18-2008 | ||
|
TpiA (triose phosphate isomerase) |
GO:0006096 |
glycolysis |
P |
DAS |
6/18/08 | ||
|
PurA |
GO:0006164 |
purine nucleotide biosynthetic process |
P |
AZ |
6-18-2008 | ||
|
PurA |
GO:0004019 |
adenylosuccinate synthase activity |
F |
AZ |
6-18-2008 | ||
|
TpiA (triose phosphate isomerase) |
GO:0004807 |
triose-phosphate isomerase activity |
F |
DAS |
6/18/08 | ||
|
FtsI |
GO:0042493 |
response to drug |
P |
BKM |
6/18/08 | ||
|
FtsI |
GO:0008955 |
peptidoglycan glycosyltransferase activity |
F |
BKM |
6/18/08 | ||
|
FtsI |
GO:0008955 |
peptidoglycan glycosyltransferase activity |
F |
BKM |
6/18/08 | ||
|
FtsN |
GO:0000917 |
barrier septum formation |
P |
AZ |
6-18-2008 | ||
|
FtsN |
GO:0005886 |
plasma membrane |
C |
AZ |
6-18-2007 | ||
|
FtsI |
GO:0031226 |
intrinsic to plasma membrane |
C |
BKM |
6/19/08 | ||
|
DdlA |
GO:0008716 |
D-alanine-D-alanine ligase activity |
F |
BKM |
6/19/08 | ||
|
DdlA |
GO:0008716 |
D-alanine-D-alanine ligase activity |
F |
BKM |
6/19/08 | ||
|
DdlB |
GO:0008716 |
D-alanine-D-alanine ligase activity |
F |
BKM |
6/19/08 | ||
|
RpsJ (S10) |
GO:0022627 |
cytosolic small ribosomal subunit |
C |
DAS |
6/19/08 | ||
|
EmtA |
GO:0008932 |
lytic endotransglycosylase activity |
F |
BKM |
6/30/08 | ||
|
Mpl |
GO:0016881 |
acid-amino acid ligase activity |
F |
BKM |
6/30/08 | ||
|
Mpl |
GO:0005737 |
cytoplasm |
C |
BKM |
6/30/08 | ||
| edit table |
</protect>
Annotations done July 1-13, 2008
<protect>
| Gene Product | Qualifier | GO ID | GO term name | Aspect | Reference | Annotator Name | Date |
|---|---|---|---|---|---|---|---|
|
GadA |
GO:0004351 |
glutamate decarboxylase activity |
F |
GSK |
July 3, 2008 | ||
|
GadB |
GO:0004351 |
glutamate decarboxylase activity |
F |
GSK |
July 3, 2008 | ||
|
GabD |
GO:0009450 |
gamma-aminobutyric acid catabolic process |
P |
GSK |
July 3, 2008 | ||
|
AtoD |
GO:0016563 |
transcription activator activity |
F |
GSK |
July 3, 2008 | ||
|
AdhE |
GO:0004022 |
alcohol dehydrogenase activity |
F |
BKM |
7/3/08 | ||
|
AdhE |
GO:0008774 |
acetaldehyde dehydrogenase (acetylating) activity |
F |
BKM |
7/3/08 | ||
|
MurA |
GO:0008760 |
UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity |
F |
BKM |
7/3/08 | ||
|
L (from bacteriophage lambda) |
GO:0044423 |
virion part |
C |
BKM |
7/1/08 | ||
|
A (from bacteriophage lambda) |
GO:0019028 |
viral capsid |
C |
BKM |
7/1/08 | ||
|
Cro (from bacteriophage lambda) |
GO:0016566 |
specific transcriptional repressor activity |
F |
BKM |
7/1/08 | ||
|
LdcA |
GO:0004180 |
carboxypeptidase activity |
F |
BKM |
7/1/08 | ||
|
OppA |
GO:0006857 |
oligopeptide transport |
P |
BKM |
7/1/08 | ||
|
OppA |
GO:0030288 |
outer membrane-bounded periplasmic space |
C |
BKM |
7/1/08 | ||
|
MurA |
GO:0008760 |
UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity |
F |
BKM |
7/3/08 | ||
|
Mlt38 |
GO:0000299 |
integral to membrane of membrane fraction |
C |
BKM |
7/4/08 | ||
|
PBP4 |
GO:0009002 |
serine-type D-Ala-D-Ala carboxypeptidase activity |
F |
BKM |
7/4/08 | ||
|
PBP4 |
GO:0042493 |
response to drug |
P |
BKM |
7/4/08 | ||
|
PBP4 |
GO:0030288 |
outer membrane-bounded periplasmic space |
C |
BKM |
7/4/08 | ||
|
N (from bacteriophage lambda) |
GO:0031564 |
transcription antitermination |
P |
BKM |
7/7/08 | ||
|
GroEL |
GO:0042963 |
phage assembly |
P |
BKM |
7/7/08 | ||
|
GroES |
GO:0042963 |
phage assembly |
P |
BKM |
7/7/08 | ||
|
GroEL |
GO:0016887 |
ATPase activity |
F |
BKM |
7/7/08 | ||
|
MtgA (Mgt) |
GO:0008955 |
peptidoglycan glycosyltransferase activity |
F |
BKM |
7/7/08 | ||
|
MtgA (Mgt) |
GO:0000299 |
integral to membrane of membrane fraction |
C |
BKM |
7/7/08 | ||
|
BolA |
GO:0006970 |
response to osmotic stress |
P |
BKM |
7/7/08 | ||
|
BolA |
GO:0030528 |
transcription regulator activity |
F |
BKM |
7/7/08 | ||
|
AmpC |
GO:0042493 |
response to drug |
P |
BKM |
7/7/08 | ||
|
AmpC |
GO:0008800 |
beta-lactamase activity |
F |
BKM |
7/7/08 | ||
|
AmpH |
GO:0042493 |
response to drug |
P |
BKM |
7/7/08 | ||
|
PBP1-3,PBP5&6 |
GO:0031225 |
anchored to membrane |
C |
BKM |
7/8/08 | ||
|
PBP1-PBP6 |
GO:0042493 |
response to drug |
P |
BKM |
7/8/08 | ||
|
PBP2 |
GO:0004180 |
carboxypeptidase activity |
F |
BKM |
7/9/08 | ||
|
PBP2 |
GO:0042493 |
response to drug |
P |
BKM |
7/9/08 | ||
|
RodA |
GO:0008360 |
regulation of cell shape |
P |
BKM |
7/11/08 | ||
| edit table |
</protect>
Annotations done July 14-31, 2008
<protect>
| Gene Product | Qualifier | GO ID | GO term name | Aspect | Reference | Annotator Name | Date |
|---|---|---|---|---|---|---|---|
|
FolP |
GO:0004156 |
dihydropteroate synthase activity |
F |
BKM |
7/14/08 | ||
|
FolP |
GO:0005737 |
cytoplasm |
C |
BKM |
7/14/08 | ||
|
FolP |
GO:0046656 |
folic acid biosynthetic process |
P |
BKM |
7/14/08 | ||
|
FolC |
GO:0004326 |
tetrahydrofolylpolyglutamate synthase activity |
F |
BKM |
7/14/08 | ||
|
FolC |
GO:0008841 |
dihydrofolate synthase activity |
F |
BKM |
7/14/08 | ||
|
FolC |
GO:0009257 |
10-formyltetrahydrofolate biosynthetic process |
P |
BKM |
7/14/08 | ||
|
FolC |
GO:0046656 |
folic acid biosynthetic process |
P |
BKM |
7/14/08 | ||
|
FolC |
GO:0005737 |
cytoplasm |
C |
BKM |
7/14/08 | ||
|
FolP |
GO:0042493 |
response to drug |
P |
BKM |
7/14/08 | ||
|
FolA |
GO:0042493 |
response to drug |
P |
BKM |
7/14/08 | ||
|
FolA |
GO:0009257 |
10-formyltetrahydrofolate biosynthetic process |
P |
BKM |
7/14/08 | ||
|
FolA |
GO:0004146 |
dihydrofolate reductase activity |
F |
BKM |
7/14/08 | ||
|
FolA |
GO:0004146 |
dihydrofolate reductase activity |
F |
BKM |
7/14/08 | ||
|
FolK |
GO:0046656 |
folic acid biosynthetic process |
P |
BKM |
7/14/08 | ||
|
FolK |
GO:0003848 |
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity |
F |
BKM |
7/14/08 | ||
|
FolM |
GO:0046656 |
folic acid biosynthetic process |
P |
BKM |
7/17/08 | ||
|
FolM |
GO:0009257 |
10-formyltetrahydrofolate biosynthetic process |
P |
BKM |
7/17/08 | ||
|
FolM |
GO:0004146 |
dihydrofolate reductase activity |
F |
BKM |
7/17/08 | ||
|
GalK |
GO:0004335 |
galactokinase activity |
F |
GSK |
July 17, 2008 | ||
|
AllS |
GO:0016563 |
transcription activator activity |
F |
GSK |
July 17, 2008 | ||
|
AllS |
GO:0045893 |
positive regulation of transcription, DNA-dependent |
P |
GSK |
July 17, 2008 | ||
|
ArgP |
GO:0006261 |
DNA-dependent DNA replication |
P |
GSK |
July 17, 2008 | ||
|
Cbl |
GO:0006350 |
transcription |
P |
GSK |
July 18, 2008 | ||
|
Cbl |
GO:0016563 |
transcription activator activity |
F |
GSK |
July 18, 2008 | ||
|
Cbl |
NOT |
GO:0006790 |
sulfur metabolic process |
P |
GSK |
July 18, 2008 | |
|
Cbl |
GO:0045883 |
positive regulation of sulfur utilization |
P |
GSK |
July 17, 2008 | ||
|
Cbl |
NOT |
GO:0019344 |
cysteine biosynthetic process |
P |
GSK |
July 18, 2008 | |
|
CynR |
GO:0016563 |
transcription activator activity |
F |
GSK |
July 18, 2008 | ||
|
CynR |
NOT |
GO:0006805 |
xenobiotic metabolic process |
P |
GSK |
July 18, 2008 | |
|
CysB |
NOT |
GO:0019344 |
cysteine biosynthetic process |
P |
GSK |
July 18, 2008 | |
|
CysB |
GO:0016564 |
transcription repressor activity |
F |
GSK |
July 18, 2008 | ||
|
CynR |
GO:0016563 |
transcription activator activity |
F |
GSK |
July 18, 2008 | ||
|
CynR |
GO:0016564 |
transcription repressor activity |
F |
GSK |
July 18, 2008 | ||
|
R (lambda endolysin) |
GO:0003796 |
lysozyme activity |
F |
BKM |
7/22/08 | ||
|
FhuA |
GO:0046790 |
virion binding |
F |
BKM |
7/22/08 | ||
|
FhuA |
GO:0009279 |
cell outer membrane |
C |
BKM |
7/22/08 | ||
|
FhuA |
GO:0015643 |
toxin binding |
F |
BKM |
7/22/08 | ||
|
FhuA |
GO:0046790 |
virion binding |
F |
BKM |
7/22/08 | ||
|
FesB |
NOT |
GO:0006826 |
The use of this column-rule is deprecated due to a security hole. |
The use of this column-rule is deprecated due to a security hole. |
|||
|
FesB |
GO:0008849 |
enterochelin esterase activity |
F |
BKM |
7/22/08 | ||
|
FesB |
NOT |
GO:0006826 |
The use of this column-rule is deprecated due to a security hole. |
The use of this column-rule is deprecated due to a security hole. |
|||
|
topB |
GO:0003917 |
DNA topoisomerase type I activity |
F |
AZ |
7/22/08 | ||
|
Ffh |
GO:0048500 |
signal recognition particle |
C |
BKM |
7/23/08 | ||
|
Ffh |
GO:0030529 |
ribonucleoprotein complex |
C |
BKM |
7/23/08 | ||
|
Ffh |
GO:0006612 |
protein targeting to membrane |
P |
BKM |
7/23/08 | ||
|
Ffh |
GO:0048500 |
signal recognition particle |
C |
BKM |
7/23/08 | ||
|
Ffh |
GO:0005525 |
GTP binding |
F |
BKM |
7/23/08 | ||
|
Ffh |
GO:0003924 |
GTPase activity |
F |
BKM |
7/23/08 | ||
|
YidC |
GO:0032977 |
membrane insertase activity |
F |
BKM |
7/23/08 | ||
|
YidC |
GO:0051205 |
protein insertion into membrane |
P |
BKM |
7/23/08 | ||
|
YidC |
GO:0016020 |
membrane |
C |
BKM |
7/23/08 | ||
|
YidC |
GO:0016021 |
integral to membrane |
C |
BKm |
7/23/08 | ||
|
YidC |
GO:0005515 |
protein binding |
F |
BKm |
7/23/08 | ||
|
DsbA |
GO:0003756 |
protein disulfide isomerase activity |
F |
AZ |
7-24-2008 | ||
|
DsbC |
GO:0006457 |
protein folding |
P |
AZ |
7-25-2008 | ||
|
DsbG |
GO:0003756 |
protein disulfide isomerase activity |
F |
AZ |
7-25-2008 | ||
|
RpoE |
GO:0016987 |
sigma factor activity |
F |
AZ |
7-25-2008 | ||
| edit table |
</protect>
July 28, 2008 - August 10, 2008
<protect>
| Gene Product | Qualifier | GO ID | GO term name | Aspect | Reference | Annotator Name | Date |
|---|---|---|---|---|---|---|---|
|
UbiD |
GO:0006744 |
ubiquinone biosynthetic process |
P |
BKM |
7/28/08 | ||
|
UbiD |
GO:0008694 |
3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity |
F |
BKM |
7/28/08 | ||
|
UbiF |
GO:0006744 |
ubiquinone biosynthetic process |
P |
BKM |
7/28/08 | ||
|
PspD |
GO:0005886 |
plasma membrane |
C |
DAS |
7/30/08 | ||
|
UbiF |
GO:0008682 |
2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase activity |
F |
BKM |
7/28/08 | ||
|
alpha of F1 subunit (AtpA) |
GO:0045261 |
proton-transporting ATP synthase complex, catalytic core F(1) |
C |
BKM |
7/30/08 | ||
|
alpha of F1 subunit (AtpA) |
GO:0015986 |
ATP synthesis coupled proton transport |
P |
BKM |
7/30/08 | ||
|
beta of F1 subunit (AtpD) |
GO:0045261 |
proton-transporting ATP synthase complex, catalytic core F(1) |
C |
BKM |
7/30/08 | ||
|
beta of F1 subunit (AtpD) |
GO:0015986 |
ATP synthesis coupled proton transport |
P |
BKM |
7/30/08 | ||
|
gamma subunit of F1 complex (AtpG) |
GO:0045261 |
proton-transporting ATP synthase complex, catalytic core F(1) |
C |
BKM |
7/31/08 | ||
|
gamma subunit of F1 complex (AtpG) |
GO:0015986 |
ATP synthesis coupled proton transport |
P |
BKM |
7/31/08 | ||
|
RppH (NudH) |
GO:0034353 |
RNA pyrophosphohydrolase activity |
F |
DAS |
7/31/08 | ||
|
RppH (NudH) |
GO:0016818 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
F |
DAS |
7/31/08 | ||
|
PspD |
GO:0005886 |
plasma membrane |
C |
DAS |
7/30/08 | ||
|
CyaY |
GO:0008198 |
ferrous iron binding |
F |
DAS |
7/31/08 | ||
|
CyaY |
GO:0008199 |
ferric iron binding |
F |
DAS |
7/31/08 | ||
|
CyaY |
GO:0005737 |
cytoplasm |
C |
DAS |
7/31/08 | ||
|
alpha of F1 (AtpA) |
Contributes to |
GO:0046933 |
hydrogen ion transporting ATP synthase activity, rotational mechanism |
F |
BKM |
7/31/08 | |
|
beta of F1 (AtpD) |
Contributes to |
GO:0046933 |
hydrogen ion transporting ATP synthase activity, rotational mechanism |
F |
BKM |
7/31/08 | |
|
gamma of F1 (AtpG) |
Contributes to |
GO:0046933 |
hydrogen ion transporting ATP synthase activity, rotational mechanism |
F |
BKM |
7/31/08 | |
|
delta of F1 (AtpH) |
GO:0045261 |
proton-transporting ATP synthase complex, catalytic core F(1) |
C |
BKM |
7/31/08 | ||
|
delta of F1 (AtpH) |
GO:0015986 |
ATP synthesis coupled proton transport |
P |
BKM |
7/31/08 | ||
|
delta of F1 (AtpH) |
Contributes to |
GO:0046933 |
hydrogen ion transporting ATP synthase activity, rotational mechanism |
F |
BKM |
7/31/08 | |
|
epsilon of F1 (AtpC) |
GO:0045261 |
proton-transporting ATP synthase complex, catalytic core F(1) |
C |
BKM |
7/31/08 | ||
|
epsilon of F1 (AtpC) |
GO:0015986 |
ATP synthesis coupled proton transport |
P |
BKM |
7/31/08 | ||
|
epsilon of F1 (AtpC) |
Contributes to |
GO:0046933 |
hydrogen ion transporting ATP synthase activity, rotational mechanism |
F |
BKM |
7/31/08 | |
|
alpha of F1 (AtpA) |
GO:0005524 |
ATP binding |
F |
BKM |
7/31/08 | ||
|
YbbN |
GO:0003756 |
protein disulfide isomerase activity |
F |
AZ |
7-31-2008 | ||
|
YbbN |
GO:0051082 |
unfolded protein binding |
F |
AZ |
7-31-2008 | ||
|
CheY |
GO:0006473 |
protein amino acid acetylation |
P |
AZ |
7-31-2008 | ||
|
Pgm |
GO:0004614 |
phosphoglucomutase activity |
F |
AZ |
7-31-2008 | ||
|
DnaA |
GO:0006261 |
DNA-dependent DNA replication |
P |
AZ |
7-31-2008 | ||
|
MvrC |
GO:0042493 |
response to drug |
P |
AZ |
7-31-2008 | ||
|
MvrA |
GO:0042493 |
response to drug |
P |
AZ |
7-31-2008 | ||
|
MdtK |
GO:0015559 |
multidrug efflux pump activity |
F |
AZ |
8-1-2008 | ||
|
TesA (aka ApeA) |
GO:0006508 |
proteolysis |
P |
AZ |
8-1-2008 Review annotation, may be a peptidase | ||
|
ArsA - plasmid gene |
GO:0015446 |
arsenite transmembrane-transporting ATPase activity |
F |
AZ |
8-1-2008 | ||
|
a of Fo (AtpB) |
GO:0016021 |
integral to membrane |
C |
BKM |
8/5/08 | ||
|
a of Fo (AtpB) |
GO:0015986 |
ATP synthesis coupled proton transport |
P |
BKM |
8/5/08 | ||
|
a of Fo (AtpB) |
Contributes to |
GO:0046961 |
hydrogen ion transporting ATPase activity, rotational mechanism |
F |
BKM |
8/5/08 | |
|
b of Fo (AtpF) |
GO:0031225 |
anchored to membrane |
C |
BKM |
8/5/08 | ||
|
b of Fo (AtpF) |
GO:0015986 |
ATP synthesis coupled proton transport |
P |
BKM |
8/5/08 | ||
|
b of Fo (AtpF) |
Contributes to |
GO:0046961 |
hydrogen ion transporting ATPase activity, rotational mechanism |
F |
BKM |
8/5/08 | |
|
c of Fo (AtpE) |
GO:0016021 |
integral to membrane |
C |
BKM |
8/5/08 | ||
|
c of Fo (AtpE) |
GO:0015986 |
ATP synthesis coupled proton transport |
P |
BKM |
8/5/08 | ||
|
c of Fo (AtpE) |
Contributes to |
GO:0046961 |
hydrogen ion transporting ATPase activity, rotational mechanism |
F |
BKM |
8/5/08 | |
|
a of Fo (AtpB) |
GO:0045263 |
proton-transporting ATP synthase complex, coupling factor F(o) |
C |
BKM |
8/5/08 | ||
|
b of Fo (AtpF) |
GO:0045263 |
proton-transporting ATP synthase complex, coupling factor F(o) |
C |
BKM |
8/5/08 | ||
|
c of Fo (AtpE) |
GO:0045263 |
proton-transporting ATP synthase complex, coupling factor F(o) |
C |
BKM |
8/5/08 | ||
|
GlgP |
GO:0005737 |
cytoplasm |
C |
BKM |
8/5/08 | ||
|
GlgP |
GO:0005980 |
glycogen catabolic process |
P |
BKM |
8/6/08 | ||
|
GlgP |
GO:0016052 |
carbohydrate catabolic process |
P |
BKM |
8/6/08 | ||
|
Hpt |
GO:0005737 |
cytoplasm |
C |
BKM |
8/6/08 | ||
|
Hpt |
GO:0032263 |
GMP salvage |
P |
BKM |
8/6/08 | ||
|
Hpt |
GO:0032264 |
IMP salvage |
P |
BKM |
8/6/08 | ||
|
Hpt |
GO:0004422 |
hypoxanthine phosphoribosyltransferase activity |
F |
BKM |
8/6/08 | ||
|
Hpt |
GO:0015949 |
nucleobase, nucleoside and nucleotide interconversion |
P |
BKM |
8/6/08 | ||
| edit table |
</protect>
Table of Negative Results and Problems
<protect>
| Gene Product | GO ID | GO term name | Aspect | Problem | Terms used for searching | Resolution | Reference | Annotator Name | Date |
|---|---|---|---|---|---|---|---|---|---|
|
SdhA |
From [106] Succinate dehyrogenase is the only membrane-bound enzyme of the TCA cycle in E. coli (Marr, 1960) I can not find this Marr 1960 reference: Localization of enzymes in bacteria. In The Bacteria v. 1 p. 443. (apparently, this is a book.... in Evans) |
GSK |
6/24/08 | ||||||
|
GcvH |
E. coli GcvH (aka H Protein) does not seem to have had any work done on it.
|
GcvH AND E. coli H Protein AND E. coli I keep getting characterization of the gcv operon. Work on the actual enzyme seems to not exist. |
Find papers on chicken or pea and add to GONUTs instead. ISS with and accession for whatever it is homologous too (SWISS PROT, etc.) Waiting on PMID:1802033[107] for annotation. |
GSK |
6/08 | ||||
| edit table |
</protect>
- ↑ Davies, SJ et al. (1999) Inactivation and regulation of the aerobic C(4)-dicarboxylate transport (dctA) gene of Escherichia coli. J. Bacteriol. 181 5624-35 PubMed
- ↑ Kalliri, E et al. (2008) Identification of Escherichia coli YgaF as an L-2-hydroxyglutarate oxidase. J. Bacteriol. 190 3793-8 PubMed
- ↑ Raynal, LC & Carpousis, AJ (1999) Poly(A) polymerase I of Escherichia coli: characterization of the catalytic domain, an RNA binding site and regions for the interaction with proteins involved in mRNA degradation. Mol. Microbiol. 32 765-75 PubMed
- ↑ Ishino, F et al. (1980) Dual enzyme activities of cell wall peptidoglycan synthesis, peptidoglycan transglycosylase and penicillin-sensitive transpeptidase, in purified preparations of Escherichia coli penicillin-binding protein 1A. Biochem. Biophys. Res. Commun. 97 287-93 PubMed
- ↑ 5.0 5.1 Nakagawa, J et al. (1984) Functional biosynthesis of cell wall peptidoglycan by polymorphic bifunctional polypeptides. Penicillin-binding protein 1Bs of Escherichia coli with activities of transglycosylase and transpeptidase. J. Biol. Chem. 259 13937-46 PubMed
- ↑ Liger, D et al. (1995) Over-production, purification and properties of the uridine-diphosphate-N-acetylmuramate:L-alanine ligase from Escherichia coli. Eur. J. Biochem. 230 80-7 PubMed
- ↑ Michaud, C et al. (1990) Over-production, purification and properties of the uridine-diphosphate-N-acetylmuramoyl-L-alanyl-D-glutamate: meso-2,6-diaminopimelate ligase from Escherichia coli. Eur. J. Biochem. 194 853-61 PubMed
- ↑ Duncan, K et al. (1990) Purification and characterization of the D-alanyl-D-alanine-adding enzyme from Escherichia coli. Biochemistry 29 2379-86 PubMed
- ↑ Ikeda, M et al. (1991) The Escherichia coli mraY gene encoding UDP-N-acetylmuramoyl-pentapeptide: undecaprenyl-phosphate phospho-N-acetylmuramoyl-pentapeptide transferase. J. Bacteriol. 173 1021-6 PubMed
- ↑ Mengin-Lecreulx, D et al. (1991) The murG gene of Escherichia coli codes for the UDP-N-acetylglucosamine: N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase involved in the membrane steps of peptidoglycan synthesis. J. Bacteriol. 173 4625-36 PubMed
- ↑ Matsuhashi, M et al. (1979) Mutational evidence for identity of penicillin-binding protein 5 in Escherichia coli with the major D-alanine carboxypeptidase IA activity. J. Bacteriol. 137 644-7 PubMed
- ↑ van der Linden, MP et al. (1992) Cytoplasmic high-level expression of a soluble, enzymatically active form of the Escherichia coli penicillin-binding protein 5 and purification by dye chromatography. Eur. J. Biochem. 204 197-202 PubMed
- ↑ El Ghachi, M et al. (2004) The bacA gene of Escherichia coli encodes an undecaprenyl pyrophosphate phosphatase activity. J. Biol. Chem. 279 30106-13 PubMed
- ↑ Cain, BD et al. (1993) Amplification of the bacA gene confers bacitracin resistance to Escherichia coli. J. Bacteriol. 175 3784-9 PubMed
- ↑ Messenger, LJ & Zalkin, H (1979) Glutamine phosphoribosylpyrophosphate amidotransferase from Escherichia coli. Purification and properties. J. Biol. Chem. 254 3382-92 PubMed
- ↑ de Crouy-Chanel, A et al. (1995) A novel function of Escherichia coli chaperone DnaJ. Protein-disulfide isomerase. J. Biol. Chem. 270 22669-72 PubMed
- ↑ Anderson, A & Cooper, RA (1969) Gluconeogenesis in Escherichia coli The role of triose phosphate isomerase. FEBS Lett. 4 19-20 PubMed
- ↑ Joyce, AR et al. (2006) Experimental and computational assessment of conditionally essential genes in Escherichia coli. J. Bacteriol. 188 8259-71 PubMed
- ↑ Iancu, CV et al. (2006) Cavitation as a mechanism of substrate discrimination by adenylosuccinate synthetases. Biochemistry 45 11703-11 PubMed
- ↑ Shimosaka, M et al. (1982) Application of hybrid plasmids carrying glycolysis genes to ATP production by Escherichia coli. J. Bacteriol. 152 98-103 PubMed
- ↑ 21.0 21.1 Ishino, F & Matsuhashi, M (1981) Peptidoglycan synthetic enzyme activities of highly purified penicillin-binding protein 3 in Escherichia coli: a septum-forming reaction sequence. Biochem. Biophys. Res. Commun. 101 905-11 PubMed
- ↑ Botta, GA & Park, JT (1981) Evidence for involvement of penicillin-binding protein 3 in murein synthesis during septation but not during cell elongation. J. Bacteriol. 145 333-40 PubMed
- ↑ 23.0 23.1 Dai, K et al. (1993) Cloning and characterization of ftsN, an essential cell division gene in Escherichia coli isolated as a multicopy suppressor of ftsA12(Ts). J. Bacteriol. 175 3790-7 PubMed
- ↑ Rodríguez-Tébar, A et al. (1985) Location of some proteins involved in peptidoglycan synthesis and cell division in the inner and outer membranes of Escherichia coli. J. Bacteriol. 161 243-8 PubMed
- ↑ al-Bar, OA et al. (1992) D-alanine: D-alanine ligase of Escherichia coli. Expression, purification and inhibitory studies on the cloned enzyme. Biochem. J. 282 ( Pt 3) 747-52 PubMed
- ↑ 26.0 26.1 Zawadzke, LE et al. (1991) Existence of two D-alanine:D-alanine ligases in Escherichia coli: cloning and sequencing of the ddlA gene and purification and characterization of the DdlA and DdlB enzymes. Biochemistry 30 1673-82 PubMed
- ↑ Wittmann-Liebold, B (1973) Studies on the primary structure of 20 proteins from Escherichia coli ribosomes by means of an improved protein sequenator. FEBS Lett. 36 247-9 PubMed
- ↑ Kraft, AR et al. (1998) Membrane-bound lytic endotransglycosylase in Escherichia coli. J. Bacteriol. 180 3441-7 PubMed
- ↑ 29.0 29.1 29.2 Hervé, M et al. (2007) Biochemical characterization and physiological properties of Escherichia coli UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase. J. Bacteriol. 189 3987-95 PubMed
- ↑ Stańczyk-Spencer, M (1977) [Blood lipids and carbohydrate tolerance in coronary arterial disease confirmed by coronography]. Kardiol Pol 20 335-41 PubMed
- ↑ De Biase, D et al. (1996) Isolation, overexpression, and biochemical characterization of the two isoforms of glutamic acid decarboxylase from Escherichia coli. Protein Expr. Purif. 8 430-8 PubMed
- ↑ Metzer, E et al. (1979) Isolation and properties of Escherichia coli K-12 mutants impaired in the utilization of gamma-aminobutyrate. J. Bacteriol. 137 1111-8 PubMed
- ↑ Jenkins, LS & Nunn, WD (1987) Regulation of the ato operon by the atoC gene in Escherichia coli. J. Bacteriol. 169 2096-102 PubMed
- ↑ 34.0 34.1 Clark, DP & Cronan, JE Jr (1980) Acetaldehyde coenzyme A dehydrogenase of Escherichia coli. J. Bacteriol. 144 179-84 PubMed
- ↑ 35.0 35.1 Marquardt, JL et al. (1992) Cloning and sequencing of Escherichia coli murZ and purification of its product, a UDP-N-acetylglucosamine enolpyruvyl transferase. J. Bacteriol. 174 5748-52 PubMed
- ↑ 36.0 36.1 Weigle, J (1966) Assembly of phage lambda in vitro. Proc. Natl. Acad. Sci. U.S.A. 55 1462-6 PubMed
- ↑ Eisen, H et al. (1970) Regulation of repressor expression in lambda. Proc. Natl. Acad. Sci. U.S.A. 66 855-62 PubMed
- ↑ 38.0 38.1 Guyer, CA et al. (1985) Purification and characterization of a periplasmic oligopeptide binding protein from Escherichia coli. J. Biol. Chem. 260 10812-8 PubMed
- ↑ Ursinus, A & Höltje, JV (1994) Purification and properties of a membrane-bound lytic transglycosylase from Escherichia coli. J. Bacteriol. 176 338-43 PubMed
- ↑ 40.0 40.1 40.2 Matsuhashi, M et al. (1977) Mutants of Escherichia coli lacking in highly penicillin-sensitive D-alanine carboxypeptidase activity. Proc. Natl. Acad. Sci. U.S.A. 74 2976-9 PubMed
- ↑ Luzzati, D (1970) Regulation of lambda exonuclease synthesis: role of the N gene product and lambda repressor. J. Mol. Biol. 49 515-9 PubMed
- ↑ 42.0 42.1 Tilly, K et al. (1981) Identification of a second Escherichia coli groE gene whose product is necessary for bacteriophage morphogenesis. Proc. Natl. Acad. Sci. U.S.A. 78 1629-33 PubMed
- ↑ Hendrix, RW (1979) Purification and properties of groE, a host protein involved in bacteriophage assembly. J. Mol. Biol. 129 375-92 PubMed
- ↑ 44.0 44.1 Di Berardino, M et al. (1996) The monofunctional glycosyltransferase of Escherichia coli is a member of a new class of peptidoglycan-synthesising enzymes. FEBS Lett. 392 184-8 PubMed
- ↑ 45.0 45.1 Santos, JM et al. (2002) The gene bolA regulates dacA (PBP5), dacC (PBP6) and ampC (AmpC), promoting normal morphology in Escherichia coli. Mol. Microbiol. 45 1729-40 PubMed
- ↑ 46.0 46.1 46.2 Henderson, TA et al. (1997) AmpC and AmpH, proteins related to the class C beta-lactamases, bind penicillin and contribute to the normal morphology of Escherichia coli. J. Bacteriol. 179 6112-21 PubMed
- ↑ 47.0 47.1 Spratt, BG (1977) Properties of the penicillin-binding proteins of Escherichia coli K12,. Eur. J. Biochem. 72 341-52 PubMed
- ↑ 48.0 48.1 Ishino, F et al. (1982) A mecillinam-sensitive peptidoglycan crosslinking reaction in Escherichia coli. Biochem. Biophys. Res. Commun. 109 689-96 PubMed
- ↑ Spratt, BG et al. (1980) Defective and plaque-forming lambda transducing bacteriophage carrying penicillin-binding protein-cell shape genes: genetic and physical mapping and identification of gene products from the lip-dacA-rodA-pbpA-leuS region of the Escherichia coli chromosome. J. Bacteriol. 143 569-81 PubMed
- ↑ 50.0 50.1 50.2 Dallas, WS et al. (1992) Cloning, sequencing, and enhanced expression of the dihydropteroate synthase gene of Escherichia coli MC4100. J. Bacteriol. 174 5961-70 PubMed
- ↑ 51.0 51.1 51.2 51.3 51.4 Bognar, AL et al. (1985) Folylpoly-gamma-glutamate synthetase-dihydrofolate synthetase. Cloning and high expression of the Escherichia coli folC gene and purification and properties of the gene product. J. Biol. Chem. 260 5625-30 PubMed
- ↑ Vedantam, G et al. (1998) Characterization of mutations contributing to sulfathiazole resistance in Escherichia coli. Antimicrob. Agents Chemother. 42 88-93 PubMed
- ↑ 53.0 53.1 53.2 53.3 Rood, JI et al. (1980) Cloning of the Escherichia coli K-12 dihydrofolate reductase gene following mu-mediated transposition. Gene 8 255-65 PubMed
- ↑ 54.0 54.1 Talarico, TL et al. (1992) Cloning, sequence analysis, and overexpression of Escherichia coli folK, the gene coding for 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. J. Bacteriol. 174 5971-7 PubMed
- ↑ 55.0 55.1 55.2 Giladi, M et al. (2003) FolM, a new chromosomally encoded dihydrofolate reductase in Escherichia coli. J. Bacteriol. 185 7015-8 PubMed
- ↑ SHERMAN, JR & ADLER, J (1963) Galactokinse from Escherichia coli. J. Biol. Chem. 238 873-8 PubMed
- ↑ 57.0 57.1 Rintoul, MR et al. (2002) Regulation of the Escherichia coli allantoin regulon: coordinated function of the repressor AllR and the activator AllS. J. Mol. Biol. 324 599-610 PubMed
- ↑ Hwang, DS et al. (1992) IciA protein, a specific inhibitor of initiation of Escherichia coli chromosomal replication. J. Biol. Chem. 267 2209-13 PubMed
- ↑ 59.0 59.1 59.2 59.3 59.4 59.5 van Der Ploeg, JR et al. (1999) The Escherichia coli ssuEADCB gene cluster is required for the utilization of sulfur from aliphatic sulfonates and is regulated by the transcriptional activator Cbl. J. Biol. Chem. 274 29358-65 PubMed
- ↑ Sung, YC & Fuchs, JA (1992) The Escherichia coli K-12 cyn operon is positively regulated by a member of the lysR family. J. Bacteriol. 174 3645-50 PubMed
- ↑ 61.0 61.1 61.2 Lamblin, AF & Fuchs, JA (1993) Expression and purification of the cynR regulatory gene product: CynR is a DNA-binding protein. J. Bacteriol. 175 7990-9 PubMed
- ↑ Jagura-Burdzy, G & Hulanicka, D (1981) Use of gene fusions to study expression of cysB, the regulatory gene of the cysteine regulon. J. Bacteriol. 147 744-51 PubMed
- ↑ CAMPBELL, A & DELCAMPILLO-CAMPBELL, A (1963) MUTANT OF LAMBDA BACTERIOPHAGE PRODUCING A THERMOLABILE ENDOLYSIN. J. Bacteriol. 85 1202-7 PubMed
- ↑ 64.0 64.1 Braun, V & Wolff, H (1973) Characterization of the receptor protein for phage T5 and colicin M in the outer membrane of E. coli B. FEBS Lett. 34 77-80 PubMed
- ↑ 65.0 65.1 Braun, V et al. (1973) A common receptor protein for phage T5 and colicin M in the outer membrane of Escherichia coli B. Biochim. Biophys. Acta 323 87-97 PubMed
- ↑ Greenwood, KT & Luke, RK (1978) Enzymatic hydrolysis of enterochelin and its iron complex in Escherichia Coli K-12. Properties of enterochelin esterase. Biochim. Biophys. Acta 525 209-18 PubMed
- ↑ Srivenugopal, KS et al. (1984) Escherichia coli DNA topoisomerase III: purification and characterization of a new type I enzyme. Biochemistry 23 1899-906 PubMed
- ↑ 68.0 68.1 Poritz, MA et al. (1990) An E. coli ribonucleoprotein containing 4.5S RNA resembles mammalian signal recognition particle. Science 250 1111-7 PubMed
- ↑ 69.0 69.1 Phillips, GJ & Silhavy, TJ (1992) The E. coli ffh gene is necessary for viability and efficient protein export. Nature 359 744-6 PubMed
- ↑ 70.0 70.1 Samuelsson, T et al. (1995) The GTPase activity of the Escherichia coli Ffh protein is important for normal growth. Biochim. Biophys. Acta 1267 83-91 PubMed
- ↑ 71.0 71.1 Samuelson, JC et al. (2000) YidC mediates membrane protein insertion in bacteria. Nature 406 637-41 PubMed
- ↑ 72.0 72.1 72.2 Scotti, PA et al. (2000) YidC, the Escherichia coli homologue of mitochondrial Oxa1p, is a component of the Sec translocase. EMBO J. 19 542-9 PubMed
- ↑ Bardwell, JC et al. (1991) Identification of a protein required for disulfide bond formation in vivo. Cell 67 581-9 PubMed
- ↑ Missiakas, D et al. (1994) The Escherichia coli dsbC (xprA) gene encodes a periplasmic protein involved in disulfide bond formation. EMBO J. 13 2013-20 PubMed
- ↑ Andersen, CL et al. (1997) A new Escherichia coli gene, dsbG, encodes a periplasmic protein involved in disulphide bond formation, required for recycling DsbA/DsbB and DsbC redox proteins. Mol. Microbiol. 26 121-32 PubMed
- ↑ Raina, S et al. (1995) The rpoE gene encoding the sigma E (sigma 24) heat shock sigma factor of Escherichia coli. EMBO J. 14 1043-55 PubMed
- ↑ 77.0 77.1 Cox, GB et al. (1969) Biosynthesis of ubiquinone in Escherichia coli K-12: location of genes affecting the metabolism of 3-octaprenyl-4-hydroxybenzoic acid and 2-octaprenylphenol. J. Bacteriol. 99 450-8 PubMed
- ↑ 78.0 78.1 Kwon, O et al. (2000) Ubiquinone (coenzyme Q) biosynthesis in Escherichia coli: identification of the ubiF gene. FEMS Microbiol. Lett. 186 157-61 PubMed
- ↑ 79.0 79.1 Adams, H et al. (2003) Interactions between phage-shock proteins in Escherichia coli. J. Bacteriol. 185 1174-80 PubMed
- ↑ Kanazawa, H et al. (1978) Coupling factor ATPase from Escherichia coli. An uncA mutant (uncA401) with defective alpha subunit. J. Biochem. 84 1513-7 PubMed
- ↑ Butlin, JD et al. (1971) Oxidative phosphorylation in Escherichia coli K12. Mutations affecting magnesium ion- or calcium ion-stimulated adenosine triphosphatase. Biochem. J. 124 75-81 PubMed
- ↑ 82.0 82.1 Senior, AE et al. (1979) Properties of membranes from mutant strains of Escherichia coli in which the beta-subunit of the adenosine triphosphatase is abnormal. Biochem. J. 180 111-8 PubMed
- ↑ 83.0 83.1 83.2 83.3 83.4 83.5 Klionsky, DJ & Simoni, RD (1985) Assembly of a functional F1 of the proton-translocating ATPase of Escherichia coli. J. Biol. Chem. 260 11200-6 PubMed
- ↑ Futai, M (1977) Reconstitution of ATPase activity from the isolated alpha, beta, and gamma subunits of the coupling factor, F1, of Escherichia coli. Biochem. Biophys. Res. Commun. 79 1231-7 PubMed
- ↑ 85.0 85.1 Deana, A et al. (2008) The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal. Nature 451 355-8 PubMed
- ↑ 86.0 86.1 Bou-Abdallah, F et al. (2004) Iron binding and oxidation kinetics in frataxin CyaY of Escherichia coli. J. Mol. Biol. 341 605-15 PubMed
- ↑ Pohl, T et al. (2007) Effects of the deletion of the Escherichia coli frataxin homologue CyaY on the respiratory NADH:ubiquinone oxidoreductase. BMC Biochem. 8 13 PubMed
- ↑ 88.0 88.1 Humbert, R et al. (1983) Escherichia coli mutants defective in the uncH gene. J. Bacteriol. 153 416-22 PubMed
- ↑ Klionsky, DJ et al. (1984) In vivo evidence for the role of the epsilon subunit as an inhibitor of the proton-translocating ATPase of Escherichia coli. J. Bacteriol. 160 1055-60 PubMed
- ↑ Kuki, M et al. (1988) Functional domains of epsilon subunit of Escherichia coli H+-ATPase (F0F1). J. Biol. Chem. 263 17437-42 PubMed
- ↑ Dunn, SD (1980) ATP causes a large change in the conformation of the isolated alpha subunit of Escherichia coli F1 ATPase. J. Biol. Chem. 255 11857-60 PubMed
- ↑ 92.0 92.1 Caldas, T et al. (2006) The Escherichia coli thioredoxin homolog YbbN/Trxsc is a chaperone and a weak protein oxidoreductase. Biochem. Biophys. Res. Commun. 343 780-6 PubMed
- ↑ Barak, R et al. (2006) The chemotaxis response regulator CheY can catalyze its own acetylation. J. Mol. Biol. 359 251-65 PubMed
- ↑ Lu, M & Kleckner, N (1994) Molecular cloning and characterization of the pgm gene encoding phosphoglucomutase of Escherichia coli. J. Bacteriol. 176 5847-51 PubMed
- ↑ Hwang, DS & Kaguni, JM (1988) Purification and characterization of the dnaA46 gene product. J. Biol. Chem. 263 10625-32 PubMed
- ↑ Morimyo, M et al. (1992) Cloning and characterization of the mvrC gene of Escherichia coli K-12 which confers resistance against methyl viologen toxicity. Nucleic Acids Res. 20 3159-65 PubMed
- ↑ Morimyo, M (1988) Isolation and characterization of methyl viologen-sensitive mutants of Escherichia coli K-12. J. Bacteriol. 170 2136-42 PubMed
- ↑ Long, F et al. (2008) Functional cloning and characterization of the multidrug efflux pumps NorM from Neisseria gonorrhoeae and YdhE from Escherichia coli. Antimicrob. Agents Chemother. 52 3052-60 PubMed
- ↑ Ichihara, S et al. (1993) Molecular cloning, sequencing, and mapping of the gene encoding protease I and characterization of proteinase and proteinase-defective Escherichia coli mutants. J. Bacteriol. 175 1032-7 PubMed
- ↑ Rosen, BP et al. (1988) Molecular characterization of an anion pump. The arsA gene product is an arsenite(antimonate)-stimulated ATPase. J. Biol. Chem. 263 3067-70 PubMed
- ↑ 101.0 101.1 101.2 101.3 101.4 101.5 101.6 101.7 101.8 Aris, JP et al. (1985) The Fo subunits of the Escherichia coli F1Fo-ATP synthase are sufficient to form a functional proton pore. J. Biol. Chem. 260 11207-15 PubMed
- ↑ 102.0 102.1 102.2 Foster, DL & Fillingame, RH (1982) Stoichiometry of subunits in the H+-ATPase complex of Escherichia coli. J. Biol. Chem. 257 2009-15 PubMed
- ↑ Yu, F et al. (1988) Alpha-glucan phosphorylase from Escherichia coli. Cloning of the gene, and purification and characterization of the protein. J. Biol. Chem. 263 13706-11 PubMed
- ↑ 104.0 104.1 Chen, GS & Segel, IH (1968) Purification and properties of glycogen phosphorylase from Escherichia coli. Arch. Biochem. Biophys. 127 175-86 PubMed
- ↑ 105.0 105.1 105.2 105.3 105.4 Guddat, LW et al. (2002) Crystal structures of free, IMP-, and GMP-bound Escherichia coli hypoxanthine phosphoribosyltransferase. Protein Sci. 11 1626-38 PubMed
- ↑ Ruíz-Herrera, J & García, LG (1972) Regulation of succinate dehydrogenase in Escherichia coli. J. Gen. Microbiol. 72 29-35 PubMed
- ↑ Stauffer, LT et al. (1991) An Escherichia coli protein with homology to the H-protein of the glycine cleavage enzyme complex from pea and chicken liver. DNA Seq. 2 13-7 PubMed
- GO:0003954 ! NADH dehydrogenase activity
- GO:0034419 ! L-2-hydroxyglutarate oxidase activity
- GO:0004652 ! polynucleotide adenylyltransferase activity
- GO:0009002 ! serine-type D-Ala-D-Ala carboxypeptidase activity
- GO:0008955 ! peptidoglycan glycosyltransferase activity
- GO:0008763 ! UDP-N-acetylmuramate-L-alanine ligase activity
- GO:0047482 ! UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase activity
- GO:0047480 ! UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
- GO:0008963 ! phospho-N-acetylmuramoyl-pentapeptide-transferase activity
- GO:0050511 ! undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
- GO:0050380 ! undecaprenyl-diphosphatase activity
- GO:0042493 ! response to drug
- GO:0004044 ! amidophosphoribosyltransferase activity
- GO:0003756 ! protein disulfide isomerase activity
- GO:0006096 ! glycolysis
- GO:0006164 ! purine nucleotide biosynthetic process
- GO:0004019 ! adenylosuccinate synthase activity
- GO:0004807 ! triose-phosphate isomerase activity
- GO:0000917 ! barrier septum formation
- GO:0005886 ! plasma membrane
- GO:0031226 ! intrinsic to plasma membrane
- GO:0008716 ! D-alanine-D-alanine ligase activity
- GO:0022627 ! cytosolic small ribosomal subunit
- GO:0008932 ! lytic endotransglycosylase activity
- GO:0016881 ! acid-amino acid ligase activity
- GO:0005737 ! cytoplasm
- GO:0004351 ! glutamate decarboxylase activity
- GO:0009450 ! gamma-aminobutyric acid catabolic process
- GO:0016563 ! transcription activator activity
- GO:0004022 ! alcohol dehydrogenase activity
- GO:0008774 ! acetaldehyde dehydrogenase (acetylating) activity
- GO:0008760 ! UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
- GO:0044423 ! virion part
- GO:0019028 ! viral capsid
- GO:0016566 ! specific transcriptional repressor activity
- GO:0004180 ! carboxypeptidase activity
- GO:0006857 ! oligopeptide transport
- GO:0030288 ! outer membrane-bounded periplasmic space
- GO:0000299 ! integral to membrane of membrane fraction
- GO:0031564 ! transcription antitermination
- GO:0042963 ! phage assembly
- GO:0016887 ! ATPase activity
- GO:0006970 ! response to osmotic stress
- GO:0030528 ! transcription regulator activity
- GO:0008800 ! beta-lactamase activity
- GO:0031225 ! anchored to membrane
- GO:0008360 ! regulation of cell shape
- GO:0004156 ! dihydropteroate synthase activity
- GO:0046656 ! folic acid biosynthetic process
- GO:0004326 ! tetrahydrofolylpolyglutamate synthase activity
- GO:0008841 ! dihydrofolate synthase activity
- GO:0009257 ! 10-formyltetrahydrofolate biosynthetic process
- GO:0004146 ! dihydrofolate reductase activity
- GO:0003848 ! 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
- GO:0004335 ! galactokinase activity
- GO:0016563 ! obsolete transcription activator activity
- GO:0045893 ! positive regulation of transcription, DNA-templated
- GO:0006261 ! DNA-dependent DNA replication
- GO:0006350 ! transcription
- GO:0006790 ! sulfur compound metabolic process
- GO:0045883 ! positive regulation of sulfur utilization
- GO:0019344 ! cysteine biosynthetic process
- GO:0006805 ! xenobiotic metabolic process
- GO:0016564 ! obsolete transcription repressor activity
- GO:0003796 ! lysozyme activity
- GO:0046790 ! virion binding
- GO:0009279 ! cell outer membrane
- GO:0015643 ! toxic substance binding
- GO:0006826 ! iron ion transport
- GO:0008849 ! enterochelin esterase activity
- GO:0003917 ! DNA topoisomerase type I activity
- GO:0048500 ! signal recognition particle
- GO:0030529 ! intracellular ribonucleoprotein complex
- GO:0006612 ! protein targeting to membrane
- GO:0005525 ! GTP binding
- GO:0003924 ! GTPase activity
- GO:0032977 ! membrane insertase activity
- GO:0051205 ! protein insertion into membrane
- GO:0016020 ! membrane
- GO:0016021 ! integral component of membrane
- GO:0005515 ! protein binding
- GO:0006457 ! protein folding
- GO:0016987 ! sigma factor activity
- GO:0006744 ! ubiquinone biosynthetic process
- GO:0008694 ! 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
- GO:0008682 ! 2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase activity
- GO:0045261 ! proton-transporting ATP synthase complex, catalytic core F(1)
- GO:0015986 ! ATP synthesis coupled proton transport
- GO:0034353 ! RNA pyrophosphohydrolase activity
- GO:0016818 ! hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
- GO:0008198 ! ferrous iron binding
- GO:0008199 ! ferric iron binding
- GO:0046933 ! hydrogen ion transporting ATP synthase activity, rotational mechanism
- GO:0005524 ! ATP binding
- GO:0051082 ! unfolded protein binding
- GO:0006473 ! protein amino acid acetylation
- GO:0004614 ! phosphoglucomutase activity
- GO:0015559 ! multidrug efflux pump activity
- GO:0006508 ! proteolysis
- GO:0015446 ! arsenite transmembrane-transporting ATPase activity
- GO:0016021 ! integral to membrane
- GO:0046961 ! hydrogen ion transporting ATPase activity, rotational mechanism
- GO:0045263 ! proton-transporting ATP synthase complex, coupling factor F(o)
- GO:0005980 ! glycogen catabolic process
- GO:0016052 ! carbohydrate catabolic process
- GO:0032263 ! GMP salvage
- GO:0032264 ! IMP salvage
- GO:0004422 ! hypoxanthine phosphoribosyltransferase activity
- GO:0015949 ! nucleobase, nucleoside and nucleotide interconversion
