ECB 04073:On One Page

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Quickview | Gene | Product(s) | Expression| Evolution | References |

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Standard Name

ECB_04073

Gene Synonym(s)
Product Desc.

putative acetyl-CoA:acetoacetyl-CoA transferase

Product Synonyms(s)
Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links



        

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Notes

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Gene

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Nomenclature

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Standard name

ECB_04073

Mnemonic
Synonyms


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Notes

Location(s) and DNA Sequence

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Strain Map location Genome coordinates Genome browsers Sequence links

REL606

NC_012967: 4405171..4412876
<gbrowseImage> name=NC_012967:4408253..4409794 source=REL606 preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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Feature Type Strain Genomic Location Evidence Reference Notes
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Notes

Alleles and Phenotypes

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<protect> See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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Resource Resource Type Source Notes/Reference
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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

<protect> See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

putative acetyl-CoA:acetoacetyl-CoA transferase

Synonyms
Product description

putative acetyl-CoA:acetoacetyl-CoA transferase

EC number (for enzymes)


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Notes

Function

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Gene Ontology

<protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions

<protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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Physical Properties

<protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MRKITTAEAL AAQIQDGATI AISGNGGGMV EADHILAAIE ARFLQTGHPR DLTLIHSLGI
GDRDCKGTNR FAHAEMLKRI IAGHFTWSPK MQALVKNNTI EAYCFPGGVI QALLREIGAG
RPGLFTHVGL GSFVDPRNGG GKSNECTTDD LVELIEIDGE TKLRYRPFKV DYAILRGTYA
DPRGNVSLEE EAIDMDSYSM ALAAHNSGGK VFVQVRDVLE AGAIEPRRVK LPGILVDGIV
EHCEQPQTYL GGYDLTISGQ HRRLSSNDAI ELVSHPVRRL IARRAARELV AGASTNFGFG
IPGGIPGVAL REGVPYQSLW LSVEQGVHNG MMLDDALFGC ARNADAIIPS LDQFEFYSGG
GIDITFLGMG EMDQYGNVNV SHLNGNLIGP GGFLEIAQNA RKVVFCGTFD AKGSKIDVTP
DGLHIAQSGQ IPKLVTQVEK ITFSAAYAQQ SGQEVLYITE RAVFQLTAEG VELIEIAPSV
EIERDILPYM AFRPIIKHPR LMESSLFTPM EDA
Length

513

Mol. Wt

55.531 kDa

pI

5.4 (calculated)

Extinction coefficient

30,370 - 31,120 (calc based on 13 Y, 2 W, and 6 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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<motif_map/>

Structure

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Structures
Models
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Structure figures

Notes

Gene Product Resources


<protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases


<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links


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Expression


Overview

Intracellular Levels


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Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)
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Notes

Transcription and Transcriptional Regulation


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Transcription unit(s)
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Notes

Translation and Regulation of Translation


Notes

Turnover and Regulation of Turnover

Notes

Experimental


Mutations Affecting Expression

<protect> See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name Mutation Phenotype Reference
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Expression Studies

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Type Reference Notes
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Expression Resources

<protect> See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to ECB_04073 Expression


<protect><protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links


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Evolution


Homologs in Other Organisms


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Organism Homologs (Statistics) Comments
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Do-It-Yourself Web Tools

Notes

Families


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Database Accession Notes
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Notes

Links


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