ECB 03460:On One Page

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Standard Name

ECB_03460

Gene Synonym(s)
Product Desc.

putative adhesin

Product Synonyms(s)
Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links



        

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Notes

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Gene

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Nomenclature

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Standard name

ECB_03460

Mnemonic
Synonyms


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Notes

Location(s) and DNA Sequence

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<protect> See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

REL606

NC_012967: 3703291..3727541
<gbrowseImage> name=NC_012967:3712991..3717841 source=REL606 preset=GeneLocation </gbrowseImage>

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Notes

Sequence Features

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Feature Type Strain Genomic Location Evidence Reference Notes
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Notes

Alleles and Phenotypes

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<protect> See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
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Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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Resource Resource Type Source Notes/Reference
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Notes

Accessions in Other Databases

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<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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Product(s)

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Nomenclature

<protect> See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

putative adhesin

Synonyms
Product description

putative adhesin

EC number (for enzymes)


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Notes

Function

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Gene Ontology

<protect> See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
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Interactions

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Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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Physical Properties

<protect> See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MNKIFKVIWN PATGNYTVTS ETAKSRGKKS GRSKLLISAL VAGGLLSSFG ALANAGNDNG
QGVDYGSGSA GDGWVAIGKG AKANTFMNTS GSSTAVGYDA IAEGQYSSAI GSKPHAIGGA
SMAFGVSAIS EGDRSIALGA SSYSLGQYSM ALGRYSKALG KLSIAMGDSS KAEGANAIAL
GNATKATEIM SIALGDTANA SKAYSMALGA SSVASEENAI ALGRSSVASG TDSLAFGRQS
LASAANAIAI GAETEAAENA TAIGNNAKAK GTNSMAMGFG SLADKVNTIA LGNGSQALAD
NAIAIGQGNK ADGVDAIALG NGSQSRGLNT IALGTASNAT GDKSLALGSN SSANGINSVA
LGADSIADLD NTVSVGNSSL KRKIVNVKNG AIKSDSYDAI NGSQLYAISD SVAKRLGGGA
AVDVDDGTVT APTYNLKNGS KNNVGAALAV LDENTLQWDQ TKGKYSAAHG TSSPTASVIT
DVADGTISAS SKDAVNGSQL KATNDDVEAN TANIATNTSN IATNTASIAT NTTNITNLTD
SVGDLQADAL LWNETKKAFS AAHGQDTTSK ITNVKDADLT ADSTDAVNGS QLKTTNDAVA
TNTTNIANNT SNIATNTTNI SNLTETVTNL GEDALKWDKD NGVFTAAHGT ETTSKITNVK
DGDLTTGSTD AVNGSQLKTT NDAVATNTTN IATNTTNISN LTETVTNLGE DALKWDKDNG
VFTAAHGNNT ASKITNILDG TVTATSSDAI NGSQLYDLSS NIATYFGGNA SVNTDGVFTG
PTYKIGETNY YNVGDALAAI NSSFSTSLGD ALLWDATAGK FSAKHGTNGD ASVITDVADG
EISDSSSDAV NGSQLHGVSS YVVDALGGGA EVNADGTITA PTYTIANADY DNVGDALNAI
DTTLDDALLW DADAGENGAF SAAHGKDKTA SVITNVANGA ISAASSDAIN GSQLYTTNKY
IADALGGDAE VNADGTITAP TYTIANTEYN NVGDALDALD DNALLWDETA NGGAGAYNAS
HDGKASIITN VANGSISEDS TDAVNGSQLN ATNMMIEQNT QIINQLAGNT DATYIQENGA
GINYVRTNDD GLAFNDASAQ GVGATAIGYN SVAKGDSSVA IGQGSYSDVD TGIALGSSSV
SSRVIAKGSR DTSITENGVV IGYDTTDGEL LGALSIGDDG KYRQIINVAD GSEAHDAVTV
RQLQNAIGAV ATTPSKYFHA NSTEEDSLAV GEDSLAMGAK TIVNGDAGIG IGLNTLVLTD
AINGIAIGSN ASANHANSIA MGSGSQTTRG AQTDYTAYNM DAPQNSVGEF SVGSEDGQRQ
ITNVAAGSAD TDAVNVGQLK VTDERVAQNT QSITNLNNQV TNLDTRVTNI ENGIGDIVTT
GSTKYFKTNT DGVDANAQGK DSVAIGSGSI AAADNSVALG TGSVADEENT ISVGSSTNQR
RITNVAAGKN ATDAVNVAQL KSSEAGGVRY DTKADGSIDY SNITLGGGNG GTTRISNVSA
GVNNNDAVNY AQLKQSVQET KQYTDQRMVE MDNKLSKTES KLSGGIASAM AMTGLPQAYT
PGASMASIGG GTYNGESAVA LGVSMVSANG RWVYKLQGST NSQGEYSAAL GAGIQW
Length

1,616

Mol. Wt

162.816 kDa

pI

4.2 (calculated)

Extinction coefficient

124,570 (calc based on 43 Y, 11 W, and 0 C residues)

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Domains/Motifs/Modification Sites

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Type Residues Description Notes References
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<motif_map/>

Structure

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Structures
Models
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Structure figures

Notes

Gene Product Resources


<protect> See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases


<protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links


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Expression


Overview

Intracellular Levels


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Molecule Organism or Strain Value Units Experimental Conditions Assay used Notes Reference(s)
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Notes

Transcription and Transcriptional Regulation


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Transcription unit(s)
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Notes

Translation and Regulation of Translation


Notes

Turnover and Regulation of Turnover

Notes

Experimental


Mutations Affecting Expression

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Allele Name Mutation Phenotype Reference
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Expression Studies

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Type Reference Notes
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Expression Resources

<protect> See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name Resource Type Description Source Notes
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Notes

Accessions Related to ECB_03460 Expression


<protect><protect> See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links


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Evolution


Homologs in Other Organisms


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Organism Homologs (Statistics) Comments
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Do-It-Yourself Web Tools

Notes

Families


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Database Accession Notes
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Notes

Links


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