alaS:Expression

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Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Cellular Levels

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See Help:Cellular levels

Molecule	Organism or Strain	Value	Units	Experimental Conditions	Assay used	Notes	Reference(s)
Protein	E. coli K-12 MC4100	1.83E+03	molecules/cell	Medium: median data from rich and minimal media Temperature (°C): 37 Growth Rate(min): other:	emPAI		PMID:18304323
Protein	Ecoli K-12	86.147+/-0.477	Molecules/cell	Medium: Temperature (°C): Growth Rate(min): * other: *		Single Molecule Fluorescence	PMID:20671182
mRNA	Ecoli K-12	0.243536122	Molecules/cell	Medium: Temperature (°C): Growth Rate(min): * other: *		by RNA_Seq	PMID:20671182
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Transcription and Transcriptional Regulation

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See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki. Transcription unit(s) alaS edit table

Figure courtesy of RegulonDB

Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

alaS regulates it's own transcription

Translation and Regulation of Translation

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<gbrowseImage> name=NC_000913:2820013..2820053 source=MG1655 flip=1 type=Gene+DNA_+Protein preset=Nterminus </gbrowseImage> This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Allele Name	Mutation	Phenotype	Reference
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Expression Studies See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Type	Reference	Notes
microarray	GEO Profiles:b2697 (EcoliWiki Page)	NCBI GEO profiles for alaS
microarray	GenExpDB:b2697 (EcoliWiki Page)	Summary of data for alaS from multiple microarray studies
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Expression Resources See Help:Expression_resources for help entering or editing information in this section of EcoliWiki.

Resource Name	Resource Type	Description	Source	Notes
	GFP Fusion	Intergenic region (2819936..2820163) fused to gfpmut2.	OpenBioSystems	GFP fusion described in Zaslaver, et al. Plate:109-AZ10; Well:B11
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Accessions Related to alaS Expression

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc	EcoCyc:EG10034	Escherichia coli str. K-12 substr. MG1655
EchoBASE	EchoBASE:EB0033	Escherichia coli str. K-12 substr. MG1655
EcoliGenExpDB (EcoliWiki Page)	EcoliGenExpDB:b2697
EcoGene	EcoGene:EG10034	Escherichia coli str. K-12 substr. MG1655
RegulonDB	RegulonDB:ECK120000031	Escherichia coli str. K-12 substr. MG1655
ASAP	ASAP:ABE-0008869	Escherichia coli str. K-12 substr. MG1655
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Links

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Name	URL	Comments
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References

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See Help:References for how to manage references in EcoliWiki.

Categories

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