insE-5:Gene Product(s): Difference between revisions

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!align=left {{table heading style}} |Standard name
!align=left |Standard name
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InsE  
InsE  
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!align=left {{table heading style}} |Synonyms
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IS3 element protein<ref name='LIB:Riley_2006'/>, DLP12 prophage; IS3 element protein InsE<ref name='LIB:Riley_2006'/>, IS3 element protein InsE<ref name='LIB:Riley_2006'/>, B0373<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0298<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2088<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0540<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1027<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-1<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-3<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-4<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-5<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
IS3 element protein<ref name='LIB:Riley_2006'/>, DLP12 prophage; IS3 element protein InsE<ref name='LIB:Riley_2006'/>, IS3 element protein InsE<ref name='LIB:Riley_2006'/>, B0373<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0298<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2088<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0540<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1027<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-1<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-3<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-4<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InsE-5<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table heading style}} |Product description
!align=left |Product description
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IS3 element protein InsE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
IS3 element protein InsE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


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!align=left {{table heading style}} |EC number (for enzymes)
!align=left |EC number (for enzymes)
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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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complete  
complete  


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!align=left {{table heading style}} |Sequence
!align=left |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object=G6534-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=G6534-MONOMER at EcoCyc]  
<pre></pre>  
<pre></pre>  
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!align=left {{table heading style}} |Length
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!align=left {{table heading style}} |Mol. Wt
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!align=left |pI
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!align=left |Extinction coefficient
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* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)


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Revision as of 01:47, 9 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

InsE

Synonyms

IS3 element protein[1], DLP12 prophage; IS3 element protein InsE[1], IS3 element protein InsE[1], B0373[2][1], B0298[2][1], B2088[2][1], B0540[2][1], B1027[2][1], InsE-1[2][1], InsE-2[2][1], InsE-3[2][1], InsE-4[2][1], InsE-5[2][1]

Product description

IS3 element protein InsE[2][3]

EC number (for enzymes)


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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0003677

DNA binding

GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR002514
SP_KW:KW-0238

F

Seeded from EcoCyc [4]

complete

GO:0004803

transposase activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002514

F

Seeded from EcoCyc [4]

complete

GO:0006310

DNA recombination

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0233

P

Seeded from EcoCyc [4]

complete

GO:0006313

transposition, DNA-mediated

GO_REF:0000002
GO_REF:0000004
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR002514
SP_KW:KW-0814
SP_KW:KW-0815

P

Seeded from EcoCyc 12.5 [5]

complete

GO:0032196

transposition

GO_REF:0000004
GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0814
SP_KW:KW-0815

P

Seeded from EcoCyc [4]

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Source Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence

at EcoCyc 

 




Length






Mol. Wt






pI






Extinction coefficient












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Domains/Motifs/Modification Sites





See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.







Type
Residues
Description
Notes





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<motif_map/>










Structure

See Help:Product_structure for help entering or editing information in this section of EcoliWiki.








Structures



<beststructure>
gene=insE-5
taxon=562,83333
</beststructure>






Models



View models at:








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Structure figures




Notes


Gene Product Resources


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 See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.







Resource type
Source
Notes/Reference





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Notes


Accessions in Other Databases


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See Help:Gene_accessions for help with entering information into the Gene Accessions table.







Database
Accession
Notes






EcoCyc (EcoliWiki Page) 





EcoCyc:G6534-MONOMER










UniProt (EcoliWiki Page) 





UniProt:P0ADH3










PFAM (EcoliWiki Page) 





PFAM:PF01527










RefSeq (EcoliWiki Page) 





RefSeq:NP_416592














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Notes


Links


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References


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See Help:References for how to manage references in EcoliWiki.



    

  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)  

    2. 

  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7  

    3. 

  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7  

    4. 

  4. ↑ 4.0 4.1 4.2 4.3 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70  

    5. 

  5. ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7  

    6. 



Categories


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