fabI:Gene Product(s): Difference between revisions

Standard name	FabI product
Synonyms	enoyl-[acyl-carrier-protein] reductase, NADH-dependent product^[1], B1288 product^[2]^[1], Gts product^[2]^[1], QmeA product^[2]^[1], EnvM product^[2]^[1], FabI product^[2]^[1]
Product description	ENOYL-ACP-REDUCT-NADH-MONOMER^[2]^[3]
EC number (for enzymes)	1.3.1.9^[1]
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
	GO:0016491	oxidoreductase activity	GO_REF:0000002 GO_REF:0000002 GO_REF:0000004	IEA: Inferred from Electronic Annotation	InterPro:IPR002198 InterPro:IPR002347 SP_KW:KW-0560	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0016020	membrane	GO_REF:0000004 GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0397 SP_KW:KW-0472	C	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0008610	lipid biosynthetic process	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0444	P	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0008152	metabolic process	GO_REF:0000002 GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR002198 InterPro:IPR002347	P	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0006633	fatty acid biosynthetic process	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0275	P	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0004318	enoyl-(acyl-carrier-protein) reductase (NADH) activity	GO_REF:0000003	IEA: Inferred from Electronic Annotation	EC:1.3.1.9	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005515	protein binding	PMID:15690043^[5]	IPI: Inferred from Physical Interaction	UniProtKB:P0AF90	F	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005624	membrane fraction	PMID:16858726^[6]	IDA: Inferred from Direct Assay		C	Seeded from EcoCyc 12.5 ^[4]	complete
	GO:0005737	cytoplasm				C	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0006654	phosphatidic acid biosynthetic process				P	Seeded from EcoCyc 11.1^[3].	required fields missing
	GO:0046677	response to antibiotic	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0046	P	Seeded from EcoCyc 12.5 ^[4]	complete
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Interactions

Partner Type	Partner	Notes
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Notes

Localization

Compartment	Description	Evidence	Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence	at EcoCyc MGFLSGKRIL VTGVASKLSI AYGIAQAMHR EGAELAFTYQ NDKLKGRVEE FAAQLGSDIV LQCDVAEDAS IDTMFAELGK VWPKFDGFVH SIGFAPGDQL DGDYVNAVTR EGFKIAHDIS SYSFVAMAKA CRSMLNPGSA LLTLSYLGAE RAIPNYNVMG LAKASLEANV RYMANAMGPE GVRVNAISAG PIRTLAASGI KDFRKMLAHC EAVTPIRRTV TIEDVGNSAA FLCSDLSAGI SGEVVHVDGG FSIAAMNELE LK
Mol. Wt	27.86 kDa (calc) ^[2]
pI	5.88^[2]
Extinction coefficient	15930 - 16430 (calc based on 7 Y, 1 W, and 4 C residues)
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Domains/Motifs/Modification Sites

Type	Residues	Description	Notes
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Structure

Structures

Models

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Notes

Gene Product Resources

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Resource type	Source	Notes/Reference
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Notes

Accessions in Other Databases

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Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:ENOYL-ACP-REDUCT-NADH-MONOMER
SwissModel (EcoliWiki Page)	SwissModel:P0AEK4
UniProt (EcoliWiki Page)	UniProt:P0AEK4
PFAM (EcoliWiki Page)	PFAM:PF00106
RefSeq (EcoliWiki Page)	RefSeq:NP_415804
PDB (EcoliWiki Page)	PDB:1DFG
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Notes

Links

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Name	URL	Comments
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References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 ^2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^3.0 ^3.1 ^3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 ^4.6 ^4.7 ^4.8 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ Butland, G et al. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature 433 531-7 PubMed
↑ Lasserre, JP et al. (2006) A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis 27 3306-21 PubMed

@@ Line 77: / Line 77: @@
 |- {{table_heading_style}}
 !|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
+|-
+|
+|
+[[Category:GO:0016491_!_oxidoreductase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016491_!_oxidoreductase_activity GO:0016491]
+|
+oxidoreductase activity
+|
+[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+|
+IEA: Inferred from Electronic Annotation
+|
+[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002198 InterPro:IPR002198]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002347 InterPro:IPR002347]<br />[http://www.uniprot.org/keywords/KW-0560 SP_KW:KW-0560]
+|
+F
+|
+Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
+|
+complete
 |-
 |
@@ Line 252: / Line 271: @@
 |
-[[Category:GO:0016491_!_oxidoreductase_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016491_!_oxidoreductase_activity GO:0016491]
+[[Category:GO:0046677_!_response_to_antibiotic]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0046677_!_response_to_antibiotic GO:0046677]
 |
-oxidoreductase activity
+response to antibiotic
 |
-[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000002 GO_REF:0000002]<br />[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
+[http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000004 GO_REF:0000004]
 |
 IEA: Inferred from Electronic Annotation
 |
-[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002198 InterPro:IPR002198]<br />[http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002347 InterPro:IPR002347]<br />[http://www.uniprot.org/keywords/KW-0560 SP_KW:KW-0560]
+[http://www.uniprot.org/keywords/KW-0046 SP_KW:KW-0046]
 |
-F
+P
 |
 Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>

fabI:Gene Product(s): Difference between revisions

Revision as of 02:24, 18 November 2008

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

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fabI:Gene Product(s): Difference between revisions

Revision as of 02:24, 18 November 2008

Nomenclature

Notes

Function

Notes

Localization

Notes

Structure and Physical Properties

Notes

Gene Product Resources

Notes

Accessions in Other Databases

Notes

Links

References

Categories

Navigation menu

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